Trimin1|347951|estExt_Genemark1.C_Ctg_170113 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347951
Unique NameTrimin1|347951|estExt_Genemark1.C_Ctg_170113
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length304
Homology
BLAST of jgi.p|Trimin1|347951 vs. uniprot
Match: A0A835ZAT7_9STRA (Glyco_hydro_81 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAT7_9STRA)

HSP 1 Score: 627 bits (1616), Expect = 2.840e-227
Identity = 303/303 (100.00%), Postives = 303/303 (100.00%), Query Frame = 0
Query:    1 MAQANFNTAQHPMSPDAALWGNVQRPYPTGAWWLNFALPGEPQPAVAYPYAVKARPEGPLVSYSATRRLVEQKIFADIFAPDLSVTTASPAVAHYVDAFDQLSVTETYETEDGGSYKLLFVKGSPYVTFEFTNCQVQLKPLALFSAVNGEAPVNWRTDSATGTQLKLELSSGQTWLLFTSEEVTYEYNNMQLAMTAPFTGVLRAAVLLHPKDEALLAQYAHVYPTGGDVAWSVEDDTMLLRAPSGRLFLRWGGGWGKWDPLNRIKDGKPQAGLYGADSCRKGGSTAVAEHLKERLGLTWSPPS 303
            MAQANFNTAQHPMSPDAALWGNVQRPYPTGAWWLNFALPGEPQPAVAYPYAVKARPEGPLVSYSATRRLVEQKIFADIFAPDLSVTTASPAVAHYVDAFDQLSVTETYETEDGGSYKLLFVKGSPYVTFEFTNCQVQLKPLALFSAVNGEAPVNWRTDSATGTQLKLELSSGQTWLLFTSEEVTYEYNNMQLAMTAPFTGVLRAAVLLHPKDEALLAQYAHVYPTGGDVAWSVEDDTMLLRAPSGRLFLRWGGGWGKWDPLNRIKDGKPQAGLYGADSCRKGGSTAVAEHLKERLGLTWSPPS
Sbjct:    1 MAQANFNTAQHPMSPDAALWGNVQRPYPTGAWWLNFALPGEPQPAVAYPYAVKARPEGPLVSYSATRRLVEQKIFADIFAPDLSVTTASPAVAHYVDAFDQLSVTETYETEDGGSYKLLFVKGSPYVTFEFTNCQVQLKPLALFSAVNGEAPVNWRTDSATGTQLKLELSSGQTWLLFTSEEVTYEYNNMQLAMTAPFTGVLRAAVLLHPKDEALLAQYAHVYPTGGDVAWSVEDDTMLLRAPSGRLFLRWGGGWGKWDPLNRIKDGKPQAGLYGADSCRKGGSTAVAEHLKERLGLTWSPPS 303          
BLAST of jgi.p|Trimin1|347951 vs. uniprot
Match: D8LU99_ECTSI (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU99_ECTSI)

HSP 1 Score: 168 bits (426), Expect = 1.590e-43
Identity = 94/238 (39.50%), Postives = 138/238 (57.98%), Query Frame = 0
Query:    8 TAQHPMSPDAALWGNVQRPYPTGAWWLNFALPGEPQPAVAYPYAVKARPEGPLVSYSATRRLVEQKIFADIFAPDLSVTTASPAVAHYVDAFDQLSVTETYETEDGGSYKLLFVKGSPYVTFEFTNCQVQLKPLALFSAVNGEAPVNWRTDSATGTQLKLELSSGQTWLLFTSEEVTYEYNNMQ-LAMTAPFTGVLRAAVLLHPKD---EALLAQYAHVYPTGGDVAWSVEDDTMLLR 241
            T +H + P   LWG V  PYPTGAWWLN A+     P    PY +K+   G  VSYSA RR+   +  AD +A DLSV+        ++  +D L+VT  ++  + G+++ L  +GSPY+TFEF     ++K       +NG+        S   T  KL LS+ +TW++FTSE VT++  ++Q + M APF+G++R AVL HP D   E  L+++A+ YP GG VA+ V+ D M +R
Sbjct:  124 TTKHLLRP-GPLWGAVTGPYPTGAWWLNLAIGEGDFPVAPLPYTIKSSDAGVGVSYSAMRRVESLERVADAYAADLSVSAKEGVTGRHIVKYDNLTVTLQHDAANEGNFRTLLARGSPYMTFEFAGATPRIKANGDILEINGKKAEAGA--SLFATTFKLALSNWETWVVFTSESVTWKVTSLQEVEMKAPFSGIVRVAVLPHPWDSEGEMTLSEHAYAYPRGGRVAFDVDGDGMEMR 358          
BLAST of jgi.p|Trimin1|347951 vs. uniprot
Match: A0A6H5JC22_9PHAE (Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC22_9PHAE)

HSP 1 Score: 165 bits (418), Expect = 3.170e-42
Identity = 94/239 (39.33%), Postives = 138/239 (57.74%), Query Frame = 0
Query:    8 TAQHPMSPDAALWGNVQRPYPTGAWWLNFALPGEPQPAVAYPYAVKARPEGPLVSYSATRRLVEQKIFADIFAPDLSVTTASPAVAHYVDAFDQLSVTETYETEDGGSYKLLFVKGSPYVTFEFTNCQVQLKPLALFSAVNGE-APVNWRTDSATGTQLKLELSSGQTWLLFTSEEVTYEYNNMQ-LAMTAPFTGVLRAAVLLHPKD---EALLAQYAHVYPTGGDVAWSVEDDTMLLR 241
            T +H + P   LWG V  PYPTGAWWLN A+     P    PY +K+   G  VSYSA RR+   +   D +A DLSV+        ++  +D L+VT  ++  + G+++ L  +GSPY+TFEF     ++K       +NG+ A V     S   T  KL LS+ +TW++FTSE VT++  ++Q + M APF+G++R AVL  P D   E  L+++A+ YP GG VA+ V+ D M +R
Sbjct:  124 TTKHLLRP-GPLWGAVTGPYPTGAWWLNLAIGEGDFPVAPLPYTIKSSDAGVGVSYSAMRRVESLERVTDAYAADLSVSAKEGVTGRHIVKYDNLTVTLQHDAANAGNFRTLLARGSPYMTFEFAGATPRIKANGDILEINGKKAEVG---ASLFATTFKLALSNWETWVVFTSESVTWKVTSLQEVEMKAPFSGIVRVAVLPRPWDSEGEMTLSEHAYAYPRGGRVAFDVDGDRMEMR 358          
BLAST of jgi.p|Trimin1|347951 vs. uniprot
Match: A0A836CER9_9STRA (Endo-1,3(4)-beta-glucanase n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CER9_9STRA)

HSP 1 Score: 125 bits (313), Expect = 2.790e-28
Identity = 82/264 (31.06%), Postives = 123/264 (46.59%), Query Frame = 0
Query:    6 FNTAQHPMSPDAALWGNVQRPYPTGAWWLNFALPGEPQPAVAYPYAVKARPEGPLVSYSATRRLVEQKIFADIFAPDLSVTTASPAVAHYVDAFDQLSVTETYETEDGGSYKLLFVKGSPYVTF--------------------------------------EFTNCQVQLKPLALFSAVNGEAPVNWRTDSATGTQLKLELSSGQTWLLFTSEEVTYEYNNMQLAMTAPFTGVLRAAVLLHPKD---EALLAQYAHVYPTGGD 228
            F TA HP+ P  ALWG V+ PYPTGAW+ N  +    QP V  PYAV+A   G  VS+SA RR   ++   D+F  DL+V  A   + H +  +D LS + ++E   G ++    V+GSPY+TF                                      ++ +    L       A++G+      T    G   KL LS+ +TW+++TSE V+++          P +G+LRAA+L    D   E  L ++A+ Y  GG+
Sbjct:  131 FVTAAHPLRP-TALWGAVKPPYPTGAWFTNLVIGAGDQPVVPLPYAVRAGAHGIDVSFSAVRRQASRRRITDVFDADLTVGAAEGYLGHALTRYDNLSASVSHELRGGAAFATHLVRGSPYMTFAAEREPAAALLAXXXXXXXXXXXXXAPAMSFGPLIRAAQYKDATPTLATATSILALDGKPLKEGAT--VRGKTFKLGLSNWETWMVYTSESVSFKVEARSFTALMPMSGMLRAALLPRAGDGEAEFELNEHAYAYAKGGE 391          
BLAST of jgi.p|Trimin1|347951 vs. uniprot
Match: A0A150RBA9_SORCE (Endo-1,3(4)-beta-glucanase n=1 Tax=Sorangium cellulosum TaxID=56 RepID=A0A150RBA9_SORCE)

HSP 1 Score: 119 bits (298), Expect = 2.250e-26
Identity = 82/246 (33.33%), Postives = 128/246 (52.03%), Query Frame = 0
Query:    1 MAQANFNTAQHPMSPDAALWGNVQRPYPTGAWWLNFALPGEPQPAVAYPYAVKARPEGPLVSYSATRRLVEQKIFADIFAPDLSVTTASPAVA---HYVDAFDQLSVTETYETEDGGSYKLLFVKGSPYVT--FEFTNCQVQLKPLALFSAVNGEAPVNWRTDSATGTQLKLELSSGQTWLLFTSEEVTYEYNNMQLAMTAPFTGVLRAAVLLHPKDEALLAQYAHVYPTGGDVAWSVEDDTMLLR 241
            + +  F  A HP+ P A L G +  P PT   W+NFAL    Q   A PY +KA  +G  +S S    +V     A +  PDL+    S   A   H + +FD LSVT  +  + GG+     V G PYVT  ++     V+       ++VNGE+         TG + ++EL++GQTW+L+ S  +++E++ + +    P+TG LR A++  P   A+L ++A V P GGD+  +V +DT  +R
Sbjct:   68 VVEPEFAPAPHPLDPGAVL-GELDTPLPTNTTWMNFALGEGDQRINAAPYDLKALGQG--LSISRPGVVVAS---ASVTTPDLTQLGLSARQAFTGHVIRSFDPLSVTVEWAAQ-GGTMTAPIVYGMPYVTTMYDGLTPSVRAGDGVAITSVNGEST---SPTEVTGDRFEIELNNGQTWVLYASPAISFEWDALAMNSEEPYTGSLRLALVPGPNAAAVLDEHAAVIPVGGDIKATVTEDTASVR 303          
BLAST of jgi.p|Trimin1|347951 vs. uniprot
Match: A0A7S3XS80_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XS80_HETAK)

HSP 1 Score: 109 bits (273), Expect = 2.550e-25
Identity = 69/180 (38.33%), Postives = 96/180 (53.33%), Query Frame = 0
Query:   61 VSYSATRRLVEQKIFADIFAPDLSVTTASPAVAHYVDAFDQLSVTETYETEDGGSYKLLFVKGSPYVTFEFTNCQVQLKPLALFSAVNGEAPVNWRTDSATGTQLKLELSSGQTWLLFTSEEVTYEYNNMQLAMTAP--FTGVLRAAVLLHPKD-EALLAQYAHVYPTGGDVAWSVEDDT 237
            V+Y A RR+V     +D F  DL +++    VA Y   +D  SVT  +ETE GG Y+ L V+GSPY T E+      L   + FS V      +    S +GT+  LE   G  WL+F S+ +T+  +    ++TA   FTG LRAAV   P+  + LL   A  YPTGG  A++V +DT
Sbjct:    3 VAYPAARRVVTPTTQSDYFEDDLVLSSQEGYVARYATGYDAFSVTVEFETEGGGVYRNLAVRGSPYATVEYEGVTPVLH--SKFSNVTSINGADAAGVSVSGTEFLLEQEDGMRWLIFASDSITFSVDEWGTSLTASESFTGTLRAAVSQDPETLDGLLRTSAGTYPTGGAFAYAVANDT 180          
BLAST of jgi.p|Trimin1|347951 vs. uniprot
Match: A0A2T9Y2C8_9FUNG (Endo-1,3(4)-beta-glucanase n=1 Tax=Smittium simulii TaxID=133385 RepID=A0A2T9Y2C8_9FUNG)

HSP 1 Score: 92.8 bits (229), Expect = 2.520e-17
Identity = 67/239 (28.03%), Postives = 107/239 (44.77%), Query Frame = 0
Query:    6 FNTAQHPMSPDAALWGNVQRPYPTGAWWLNFALPGEPQPAVAYPYAVKARPEGPLVSYSATRRLVEQKIFADIFAPDLSVTTASPAVAHYVDAFDQLSVTETYETEDGGS--YKLLFVKGSPYVTFEFTNCQVQLKPLALFSAVNGEAPVNWRTDSATGTQLKLELSSGQTWLLFTSEEVTYEYNNM-QLAMTAPFTGVLRAAVLLHPK----DEALLAQYAHVYPTGGDVAWSVEDDT 237
            F++ Q+   P+A LWGN+Q PYPT  WW+NFAL G  QP    PY   A  EG  +S+   +  V           + +  +     +  V +FD +++T ++ ++   S    +  VKGSPY T ++ N      PL  + +    A +   T  +  T  K  L +G+ W L+ S  ++  +    +L    P+TG LR      P     +   L +Y    P G +V +S    T
Sbjct:   29 FSSVQNSYKPNA-LWGNIQSPYPTNKWWMNFALEGGDQPIGCLPYTTTASIEG--ISFFYPQPSVSSISVTMSSMSEWTAGSREGFSSRQVSSFDDMTMTYSWTSKASSSDYMSVPLVKGSPYFTLKYKNTT----PLLAYKS----AKITSATRDSEMTSFKFTLENGRVWGLYASSPISLFFTQSGELISDKPYTGYLRFVYFPDPSKYVDNHVALRKYKDAIPIGVNVTFSANTIT 256          
BLAST of jgi.p|Trimin1|347951 vs. uniprot
Match: A0A8I6YIN4_HORVV (Glyco_hydro_81 domain-containing protein n=1 Tax=Hordeum vulgare subsp. vulgare TaxID=112509 RepID=A0A8I6YIN4_HORVV)

HSP 1 Score: 84.3 bits (207), Expect = 7.360e-15
Identity = 66/211 (31.28%), Postives = 100/211 (47.39%), Query Frame = 0
Query:   23 VQRPYPTGAWWLNFALPGEPQPAVAYPYAVKARPEGPLVSYSATRRLVEQKIFADIFAPDLSVTTASPAVA----HYVDAFDQLSVTETYETEDGGSYKLLFVKGSPYVTFEFTNCQVQLK-PLALFSAVNGEAPVNWRTDSATGTQLKLELSSGQTWLLFTSEEVTYEYNNMQLAMTAPFTGVLRAAVLLHPKDEALLAQYAHVYPTGGD 228
            +  P PT  ++ NF L    QP   +PY+V++   G  V Y +  R          FA DL+V++ S A A    H V AFD LS+T     +   S +   V G P+VT         +   +A   A    AP +        T+ +L+++SGQT+LL+ S  +  +  ++    T  F+ V+R A L  P  EA+L QY+  YPT G+
Sbjct:   16 ILAPLPTNCFFQNFTLKNGDQPEYIHPYSVRSAAAGLTVCYPS--RSHSPSFDIQTFAADLTVSSPSDAAAAGQPHRVIAFDDLSIT----LDISPSLRAFLVHGCPFVTVTTAEAAGPVDVSVASVHAFLEAAPCD-----DVRTKWRLQMNSGQTFLLYASAPIGLQQASVTQLATPGFSSVIRIAYLPDPAMEAVLDQYSRCYPTAGE 215          
BLAST of jgi.p|Trimin1|347951 vs. uniprot
Match: A0A6S8U7P2_9STRA (Endo-1,3(4)-beta-glucanase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A6S8U7P2_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 1.450e-14
Identity = 76/259 (29.34%), Postives = 102/259 (39.38%), Query Frame = 0
Query:    6 FNTAQHPMSPDAALWGNVQRPYPTGAWWLNFALPGEPQP------AVAYPYAVKARPE-GPLVSYSATRRLVEQKIFADIFAPDLSVTTASPAVAHYVDAFDQLSVTETYETEDGGSYKLLFVKGSPYVTFEFTNCQVQLKPLALFSAVNGEAPVNWRT------------------------------------DSATGTQLKLELSSGQTWLLFTSEEVTYEYNNMQLAMTAPFTGVLRAAVLLHPKDEALLAQYAH 221
            F    HP +P   LWGNV+RP+PTGAWW N  + G          A A PY V   P+ G ++ Y       +    A   + DL V+         V A+D L++T      D G    LF +GSPYVTF        LK  ALF+ +     V   T                                     + TG    + LS+GQ W L+ S  VT  +++     T  F GV+RAAV+     +  L   AH
Sbjct:   74 FEARTHPDTP-TKLWGNVKRPFPTGAWWTNLVVGGPSSSGDGLGTAFATPYTVSVLPDKGVVLGYGEVLATNDSLTLAT--SQDLIVSLKGGLEKREVVAYDDLTMTMRCSA-DKGQIDALFARGSPYVTFRVDGVP-SLKSDALFTDLQAVDAVTNETMPKACAAYPSCILASMKGDCCPQPSGVKHPCCSGSLGAQTGEVFSVALSNGQAWRLYFSSPVTLTWDSTGAHTTHSFQGVMRAAVVPSNSTKDALMLDAH 327          
BLAST of jgi.p|Trimin1|347951 vs. uniprot
Match: UPI0010A5303E (probable endo-1,3(4)-beta-glucanase ARB_01444 n=3 Tax=Prosopis alba TaxID=207710 RepID=UPI0010A5303E)

HSP 1 Score: 83.6 bits (205), Expect = 3.450e-14
Identity = 59/214 (27.57%), Postives = 105/214 (49.07%), Query Frame = 0
Query:   23 VQRPYPTGAWWLNFALPGEPQPAVAYPYAVKARPEGPLVSY---SATRRLVEQKIFADIFAPDLSVTTASPAVAHYVDAFDQLSVTETYETEDGGSYKLLFVKGSPYVTFEFTNCQVQLKPLALFSAVNGEAPVNWRTDSATGTQLKLELSSGQTWLLFTSEEVTYEYNNMQLAMTAPFTGVLRAAVL--LHPKDEALLAQYAHVYPTGGDVAW 231
            +  P PT +++ NF L    +P   +PY +K       +SY   S+T   + Q   AD+      VT       H + +F  L VT  + + +    +   V+GSP++T   TN  V        S     + ++  +++A+ T+  L+LS+GQTWL++TS  +   ++  ++  +  F+G++R A+L   +PK E +L Q+   YP  GD  +
Sbjct:   98 LSTPLPTNSFFQNFVL-NNVEPEYIHPYIIKPCLSSLSLSYPSRSSTSTFISQIFTADLTISASEVTDHHSQKTHVISSFSDLGVTLEFPSSN---MQFFLVRGSPFLTVNVTNQTV-------ISISTVHSILSLSSNNASLTKYTLQLSNGQTWLIYTSSPIGLNHDPSKIT-SEEFSGIIRIALLPDSNPKLETILNQFCFCYPVSGDATF 299          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347951 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZAT7_9STRA2.840e-227100.00Glyco_hydro_81 domain-containing protein n=1 Tax=T... [more]
D8LU99_ECTSI1.590e-4339.50Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sili... [more]
A0A6H5JC22_9PHAE3.170e-4239.33Endo-1,3(4)-beta-glucanase n=1 Tax=Ectocarpus sp. ... [more]
A0A836CER9_9STRA2.790e-2831.06Endo-1,3(4)-beta-glucanase n=2 Tax=Tribonema minus... [more]
A0A150RBA9_SORCE2.250e-2633.33Endo-1,3(4)-beta-glucanase n=1 Tax=Sorangium cellu... [more]
A0A7S3XS80_HETAK2.550e-2538.33Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A2T9Y2C8_9FUNG2.520e-1728.03Endo-1,3(4)-beta-glucanase n=1 Tax=Smittium simuli... [more]
A0A8I6YIN4_HORVV7.360e-1531.28Glyco_hydro_81 domain-containing protein n=1 Tax=H... [more]
A0A6S8U7P2_9STRA1.450e-1429.34Endo-1,3(4)-beta-glucanase n=1 Tax=Pelagomonas cal... [more]
UPI0010A5303E3.450e-1427.57probable endo-1,3(4)-beta-glucanase ARB_01444 n=3 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D2.70.98.30coord: 21..219
e-value: 7.2E-35
score: 122.6
IPR040451Glycosyl hydrolase family 81, N-terminalPFAMPF03639Glyco_hydro_81coord: 11..236
e-value: 6.6E-24
score: 84.7
IPR005200Endo-1,3(4)-beta-glucanasePANTHERPTHR31983ENDO-1,3(4)-BETA-GLUCANASE 1coord: 22..232

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:852779..856079 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347951mRNA_3426Tribonema minus UTEX_B_3156 mRNAContig_17 852779..856079 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347951|estExt_Genemark1.C_Ctg_170113 ID=Trimin1|347951|estExt_Genemark1.C_Ctg_170113|Name=jgi.p|Trimin1|347951|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=304bp
MAQANFNTAQHPMSPDAALWGNVQRPYPTGAWWLNFALPGEPQPAVAYPY
AVKARPEGPLVSYSATRRLVEQKIFADIFAPDLSVTTASPAVAHYVDAFD
QLSVTETYETEDGGSYKLLFVKGSPYVTFEFTNCQVQLKPLALFSAVNGE
APVNWRTDSATGTQLKLELSSGQTWLLFTSEEVTYEYNNMQLAMTAPFTG
VLRAAVLLHPKDEALLAQYAHVYPTGGDVAWSVEDDTMLLRAPSGRLFLR
WGGGWGKWDPLNRIKDGKPQAGLYGADSCRKGGSTAVAEHLKERLGLTWS
PPS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR040451GH81_N
IPR005200Endo-beta-glucanase