Trimin1|347920|estExt_Genemark1.C_Ctg_170071 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347920
Unique NameTrimin1|347920|estExt_Genemark1.C_Ctg_170071
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length180
Homology
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A835ZAQ6_9STRA (V-SNARE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ6_9STRA)

HSP 1 Score: 318 bits (814), Expect = 3.820e-109
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 0
Query:    1 MASPMFESYVEEILTLAAEVRHLLQTGSVGDVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLRTASERRQLVSRVDGSDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGKWYRR 179
            MASPMFESYVEEILTLAAEVRHLLQTGSVGDVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLRTASERRQLVSRVDGSDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGKWYRR
Sbjct:    1 MASPMFESYVEEILTLAAEVRHLLQTGSVGDVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLRTASERRQLVSRVDGSDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGKWYRR 179          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A836CJ32_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ32_9STRA)

HSP 1 Score: 126 bits (316), Expect = 5.990e-33
Identity = 90/192 (46.88%), Postives = 122/192 (63.54%), Query Frame = 0
Query:    5 MFESYVEEILTLAAEVRHLLQTGSV---------GDVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLR----TA---SERRQLVSRVDG-----SDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGK 175
            +FESY EE +TL  ++   +   S          G + +A + LG+A DLL+Q+EVEARS  DA TR DLQA+V ++K SLAS+R    TA   +ER+ L+S  DG     S   A+   R+R+L  GD L +Q+ MLA +K  +LE EGVAGE+T ELGRNRETIQSAH KV+E  +M   A++L++ M K
Sbjct:    4 IFESYHEEFVTLTTDLSRNISHASTYETNPAARSGQLRQANVLLGQADDLLKQMEVEARSTPDAPTRRDLQAKVASYKKSLASVRRDYQTAVEKTERQGLMSTADGLEHLYSQAGASKEHRERLLKTGDKLNEQSEMLANSKRTILEIEGVAGEITTELGRNRETIQSAHGKVREVSAMTANARRLVHNMSK 195          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A7S2V424_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V424_9STRA)

HSP 1 Score: 91.3 bits (225), Expect = 2.530e-19
Identity = 75/191 (39.27%), Postives = 109/191 (57.07%), Query Frame = 0
Query:    1 MASPMFESYVEEILTLAAEVRHLLQTGSVGDVD--------RAV-LQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLRTA-------SERRQLVSRVDGSDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGK 175
            MAS MFE Y EE  +L+ ++   +   +  + D        R V   L +A +LL+Q+E+EARS +D+  R +LQ + Q +  +L  LR          ERR L+    GS    +A QRQR+L +G  L  Q + L+ A+  + ETE VA E+T ELGRNRE I+S HSKV+E GSM   A+++++ M K
Sbjct:   21 MAS-MFEDYCEEFSSLSTQISKNISDITTYEDDAEKKKKLLRTVDTMLVQASELLQQMELEARSESDSGARQELQGRAQQYGTTLDRLRADHARARQDEERRDLMGGA-GSGKGISADQRQRLLKSGQLLDDQTSKLSNARAVIQETEEVALEITQELGRNREKIESVHSKVREVGSMTHTARRIIHSMNK 209          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A6U0HSB3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0HSB3_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.810e-15
Identity = 68/197 (34.52%), Postives = 105/197 (53.30%), Query Frame = 0
Query:    1 MASPMFESYVEEILTLAAEVRHLLQTGSV----------GDVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLR-------TASERRQLV-----SRVDGSDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGK 175
            M++  FE Y EE L L  ++   L +  +           D+  A   L +  DLL+Q+ VEAR A +  T+ DL  +V+  KA LA+LR       + +ER  L+     SRVDG    A+ + ++R+L   D +  Q   L  A+  + +TE  A E+T ELGRNRETIQSAH +V+E   + + A++++  M +
Sbjct:   27 MSTVSFERYDEEFLLLTEQIEKSLSSLDIESNQASSSAESDLKLASNILSQCDDLLKQMSVEARGADNPDTKRDLLHKVRICKAKLANLREDYDKAKSKAERMSLIGSSSGSRVDG----ASGSHKERLLANSDRIKSQNETLDRARRVMADTEETAMEITTELGRNRETIQSAHGRVREVSGLTNRARRIVQNMSR 219          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A6S8XXA7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XXA7_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.160e-15
Identity = 69/193 (35.75%), Postives = 106/193 (54.92%), Query Frame = 0
Query:    1 MASPMFESYVEEILTLAAEVRHLL----------QTGSVGDVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLR----TAS---ERRQLVSRVDG-SDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGK 175
            M+S  FE Y EE L+L  +V+  L           + +  D+  A+  L +  DLL+Q+ VEAR A +A T+ +L  +V+  KA LA+LR    TA    ER  L+S   G S    A + ++R+L   + +  Q   L  A+  + +TE  A E+T ELGRNRETIQSAH +V+E   + + A++++  M +
Sbjct:    1 MSSISFERYDEEFLSLTEQVQKSLTSLDIESAQSSSSAESDLKFALNLLSQCEDLLKQMSVEARGADNADTKKELLHKVRVCKAKLANLRDDYETAKNEIERMSLISPSLGPSRGNGAGSHKERLLATSEKIKSQNDTLERARRIMADTEETAMEITTELGRNRETIQSAHGRVREVSGLTNRARRIVQNMSR 193          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A7R9ZE01_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZE01_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 8.920e-13
Identity = 64/196 (32.65%), Postives = 103/196 (52.55%), Query Frame = 0
Query:    1 MASPMFESYVEEILTLAAEVRHLLQT---------GSVG---DVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLRTASE------RRQLVSRVDGSDPAAAAAQ---RQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGK 175
            M+S  F+ Y EE L+L  +VR  L +         GS     D+      L +  DLL+Q+ +EARSA DA ++++L  +V+  K+ L+ LR+  E       R  +   +G+ P +       R+R+L   D L  Q   L  A+  + ETE  A E+T ELGRNRE I+SAH +V++   + + A++++  M +
Sbjct:   17 MSSIPFDRYDEEFLSLTEQVRRSLSSLEGDLESNGGSSSVESDLKMTANLLSQCDDLLKQMGLEARSAGDAQSKSELLGKVKKCKSKLSGLRSEYEAARTKMERSHLGLDNGNAPRSGGLSNDHRERLLKTNDQLENQNRTLDRARRVMAETEDTALEITEELGRNREKIESAHGRVRDVAGLTNRARRIVQSMNR 212          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A7S4MGJ4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MGJ4_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 6.070e-12
Identity = 64/193 (33.16%), Postives = 102/193 (52.85%), Query Frame = 0
Query:    1 MASPMFESYVEEILTLAAEVRHLLQT--GSV--------GDVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLRTA-SERRQLVSRVD----GSDPAAAAAQ---RQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGK 175
            M+S  F+ Y EE L+L  +VR  L +  G +         D+      L +  DLL+Q+ +EARS  DA+ + +L  +V+  K+ L  LR+  +  R  + R +    GS P +  A    R+R+L     L +Q   L  A+  + ETE  A E+T ELGRNRE I+SAH +VK+   + + A++++  M +
Sbjct:   16 MSSIPFDRYDEEFLSLTEQVRRSLASLEGDIESGGSSVESDLKMTANLLSQCDDLLKQMGLEARSVGDASAKRELLDKVKKCKSKLQGLRSEYNAARNKMDRANLGLGGSAPHSGGASNDHRERLLKTSGQLEEQNRTLDRARRVMAETEETALEITEELGRNREKIESAHGRVKDVSGLTNRARRIVQSMNR 208          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A7S0FKY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FKY8_9STRA)

HSP 1 Score: 71.2 bits (173), Expect = 6.260e-12
Identity = 63/193 (32.64%), Postives = 100/193 (51.81%), Query Frame = 0
Query:    6 FESYVEEILTLAAEVRHLLQTGSVGDVDRAVLQ---------LGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLR-------TASERRQLVSRVDGSDPAA-------AAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGK 175
            F+ Y EE   L ++VR  LQ+    D++ + +Q         L +  DLL+Q+ +EAR   +A T+A    +V+  K+SL+ LR       T  ER  L   +DGS           +  QR R+L   D +A Q   L  A+  + +TE  A E+T+EL RNRE I+SAH +V+E   + + A++++  M +
Sbjct:    6 FDRYDEEFEELTSQVRRSLQSLKTADIESSSVQSDLQMTANLLSQCDDLLKQMSIEARGVDNADTKAKCLYKVRQCKSSLSDLRSEYETENTKFERSALG--LDGSSGRGXXXXGGLSNEQRGRLLKTNDQIASQNRTLDNARRIMSDTEETAMEITSELARNREKIESAHGRVREVSGLTNRARRIVQSMSR 196          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: B8CG98_THAPS (V-SNARE domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG98_THAPS)

HSP 1 Score: 67.8 bits (164), Expect = 1.190e-10
Identity = 67/183 (36.61%), Postives = 93/183 (50.82%), Query Frame = 0
Query:    6 FESYVEEILTLAAEV----RHLLQTGSVG-------DVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLR-------TASERRQLVSRVD-----GSDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDE 165
            FE Y EE L+L  +V    R L  + S G       D+  A   L +A DLL+Q+ +EAR   DA  + DL  +V+  K  LA+LR       +  ER  L    D      +    ++  ++R+L   D L  Q+  LA A+  + ETEGVA E+T ELGR+RETI SAH + KE  +   E
Sbjct:    7 FERYDEEFLSLTEQVTSKLRSLDPSTSSGLPPTAEADIKMAHNLLLQADDLLKQMGLEARGVDDAGVKRDLLGKVRVCKTRLANLRDDYEAAKSNVERNSLGLNSDIESGGRNSRGRSSGSKERLLSNTDALQSQSETLANARSIMAETEGVAMEITEELGRHRETITSAHGRGKEDSAEYGE 189          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A7S2UKP9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKP9_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 7.050e-9
Identity = 60/192 (31.25%), Postives = 96/192 (50.00%), Query Frame = 0
Query:    6 FESYVEEILTLAAEVRHLL-------------QTGSVGDVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLR-------TASERRQLV--SRVDGSDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGK 175
            FE Y EE  +L  +V   L             QT     +      L +  DLL+Q+ VEAR   DA+ + DL  +V+  K  LA+LR       +  +R+ L+  + +  +     +  RQR+L+    ++ Q   L  A+  + ETE VA E+T+EL RNRETI+SAH +V+    + + A+++L  M +
Sbjct:    7 FERYDEEFDSLTQQVEQSLTKLKELPEKEDNNQTEESSSLRFTTGLLAQCDDLLKQMAVEARGVDDASLKRDLLHKVRICKTKLANLRDDVKTIQSDLDRKSLLRSNSLSQNGKQGNSDSRQRLLETTAHMSAQNDTLDHARRVMAETEDVALEITSELSRNRETIESAHGRVRNVSGLTNRARRILQNMSR 198          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 19
Match NameE-valueIdentityDescription
A0A835ZAQ6_9STRA3.820e-109100.00V-SNARE domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CJ32_9STRA5.990e-3346.88Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S2V424_9STRA2.530e-1939.27Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U0HSB3_9STRA1.810e-1534.52Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6S8XXA7_9STRA3.160e-1535.75Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7R9ZE01_9STRA8.920e-1332.65Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S4MGJ4_9STRA6.070e-1233.16Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0FKY8_9STRA6.260e-1232.64Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
B8CG98_THAPS1.190e-1036.61V-SNARE domain-containing protein n=1 Tax=Thalassi... [more]
A0A7S2UKP9_9STRA7.050e-931.25Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 46..82
NoneNo IPR availablePFAMPF12352V-SNARE_Ccoord: 113..173
e-value: 2.9E-7
score: 30.7
NoneNo IPR availableGENE3D1.20.5.110coord: 102..178
e-value: 7.5E-15
score: 56.9
NoneNo IPR availablePANTHERPTHR21230VESICLE TRANSPORT V-SNARE PROTEIN VTI1-RELATEDcoord: 3..175
NoneNo IPR availablePANTHERPTHR21230:SF26VESICLE TRANSPORT V-SNARE 13coord: 3..175
NoneNo IPR availableSUPERFAMILY58038SNARE fusion complexcoord: 116..173
IPR007705Vesicle transport v-SNARE, N-terminalPFAMPF05008V-SNAREcoord: 38..81
e-value: 1.8E-6
score: 28.2
IPR038407Vesicle transport v-SNARE, N-terminal domain superfamilyGENE3D1.20.58.400coord: 2..91
e-value: 1.3E-7
score: 33.7

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:529626..532134 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347920mRNA_3380Tribonema minus UTEX_B_3156 mRNAContig_17 529614..532134 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347920|estExt_Genemark1.C_Ctg_170071 ID=Trimin1|347920|estExt_Genemark1.C_Ctg_170071|Name=jgi.p|Trimin1|347920|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=180bp
MASPMFESYVEEILTLAAEVRHLLQTGSVGDVDRAVLQLGEAHDLLRQLE
VEARSATDAATRADLQAQVQAHKASLASLRTASERRQLVSRVDGSDPAAA
AAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQ
SAHSKVKETGSMMDEAKQLLNMMGKWYRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007705Vesicle_trsprt_v-SNARE_N
IPR038407v-SNARE_N_sf