mRNA_3380 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|347920
Unique NamemRNA_3380
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A835ZAQ6_9STRA (V-SNARE domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAQ6_9STRA)

HSP 1 Score: 319 bits (817), Expect = 1.570e-109
Identity = 179/179 (100.00%), Postives = 179/179 (100.00%), Query Frame = 1
Query:    1 MASPMFESYVEEILTLAAEVRHLLQTGSVGDVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLRTASERRQLVSRVDGSDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGKWYRR 537
            MASPMFESYVEEILTLAAEVRHLLQTGSVGDVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLRTASERRQLVSRVDGSDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGKWYRR
Sbjct:    1 MASPMFESYVEEILTLAAEVRHLLQTGSVGDVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLRTASERRQLVSRVDGSDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGKWYRR 179          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A836CJ32_9STRA (Soluble NSF attachment protein receptor n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ32_9STRA)

HSP 1 Score: 127 bits (319), Expect = 2.440e-33
Identity = 90/192 (46.88%), Postives = 122/192 (63.54%), Query Frame = 1
Query:   13 MFESYVEEILTLAAEVRHLLQTGSV---------GDVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLR----TA---SERRQLVSRVDG-----SDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGK 525
            +FESY EE +TL  ++   +   S          G + +A + LG+A DLL+Q+EVEARS  DA TR DLQA+V ++K SLAS+R    TA   +ER+ L+S  DG     S   A+   R+R+L  GD L +Q+ MLA +K  +LE EGVAGE+T ELGRNRETIQSAH KV+E  +M   A++L++ M K
Sbjct:    4 IFESYHEEFVTLTTDLSRNISHASTYETNPAARSGQLRQANVLLGQADDLLKQMEVEARSTPDAPTRRDLQAKVASYKKSLASVRRDYQTAVEKTERQGLMSTADGLEHLYSQAGASKEHRERLLKTGDKLNEQSEMLANSKRTILEIEGVAGEITTELGRNRETIQSAHGKVREVSAMTANARRLVHNMSK 195          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A7S2V424_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V424_9STRA)

HSP 1 Score: 92.4 bits (228), Expect = 1.030e-19
Identity = 75/191 (39.27%), Postives = 109/191 (57.07%), Query Frame = 1
Query:    1 MASPMFESYVEEILTLAAEVRHLLQTGSVGDVD--------RAV-LQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLRTA-------SERRQLVSRVDGSDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGK 525
            MAS MFE Y EE  +L+ ++   +   +  + D        R V   L +A +LL+Q+E+EARS +D+  R +LQ + Q +  +L  LR          ERR L+    GS    +A QRQR+L +G  L  Q + L+ A+  + ETE VA E+T ELGRNRE I+S HSKV+E GSM   A+++++ M K
Sbjct:   21 MAS-MFEDYCEEFSSLSTQISKNISDITTYEDDAEKKKKLLRTVDTMLVQASELLQQMELEARSESDSGARQELQGRAQQYGTTLDRLRADHARARQDEERRDLMGGA-GSGKGISADQRQRLLKSGQLLDDQTSKLSNARAVIQETEEVALEITQELGRNREKIESVHSKVREVGSMTHTARRIIHSMNK 209          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A6U0HSB3_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A6U0HSB3_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 7.430e-16
Identity = 68/197 (34.52%), Postives = 105/197 (53.30%), Query Frame = 1
Query:    1 MASPMFESYVEEILTLAAEVRHLLQTGSV----------GDVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLR-------TASERRQLV-----SRVDGSDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGK 525
            M++  FE Y EE L L  ++   L +  +           D+  A   L +  DLL+Q+ VEAR A +  T+ DL  +V+  KA LA+LR       + +ER  L+     SRVDG    A+ + ++R+L   D +  Q   L  A+  + +TE  A E+T ELGRNRETIQSAH +V+E   + + A++++  M +
Sbjct:   27 MSTVSFERYDEEFLLLTEQIEKSLSSLDIESNQASSSAESDLKLASNILSQCDDLLKQMSVEARGADNPDTKRDLLHKVRICKAKLANLREDYDKAKSKAERMSLIGSSSGSRVDG----ASGSHKERLLANSDRIKSQNETLDRARRVMADTEETAMEITTELGRNRETIQSAHGRVREVSGLTNRARRIVQNMSR 219          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A6S8XXA7_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S8XXA7_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 1.290e-15
Identity = 69/193 (35.75%), Postives = 106/193 (54.92%), Query Frame = 1
Query:    1 MASPMFESYVEEILTLAAEVRHLL----------QTGSVGDVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLR----TAS---ERRQLVSRVDG-SDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGK 525
            M+S  FE Y EE L+L  +V+  L           + +  D+  A+  L +  DLL+Q+ VEAR A +A T+ +L  +V+  KA LA+LR    TA    ER  L+S   G S    A + ++R+L   + +  Q   L  A+  + +TE  A E+T ELGRNRETIQSAH +V+E   + + A++++  M +
Sbjct:    1 MSSISFERYDEEFLSLTEQVQKSLTSLDIESAQSSSSAESDLKFALNLLSQCEDLLKQMSVEARGADNADTKKELLHKVRVCKAKLANLRDDYETAKNEIERMSLISPSLGPSRGNGAGSHKERLLATSEKIKSQNDTLERARRIMADTEETAMEITTELGRNRETIQSAHGRVREVSGLTNRARRIVQNMSR 193          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A7R9ZE01_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9ZE01_9STRA)

HSP 1 Score: 75.1 bits (183), Expect = 3.670e-13
Identity = 64/196 (32.65%), Postives = 103/196 (52.55%), Query Frame = 1
Query:    1 MASPMFESYVEEILTLAAEVRHLLQT---------GSVG---DVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLRTASE------RRQLVSRVDGSDPAAAAAQ---RQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGK 525
            M+S  F+ Y EE L+L  +VR  L +         GS     D+      L +  DLL+Q+ +EARSA DA ++++L  +V+  K+ L+ LR+  E       R  +   +G+ P +       R+R+L   D L  Q   L  A+  + ETE  A E+T ELGRNRE I+SAH +V++   + + A++++  M +
Sbjct:   17 MSSIPFDRYDEEFLSLTEQVRRSLSSLEGDLESNGGSSSVESDLKMTANLLSQCDDLLKQMGLEARSAGDAQSKSELLGKVKKCKSKLSGLRSEYEAARTKMERSHLGLDNGNAPRSGGLSNDHRERLLKTNDQLENQNRTLDRARRVMAETEDTALEITEELGRNREKIESAHGRVRDVAGLTNRARRIVQSMNR 212          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A7S4MGJ4_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MGJ4_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 2.500e-12
Identity = 64/193 (33.16%), Postives = 102/193 (52.85%), Query Frame = 1
Query:    1 MASPMFESYVEEILTLAAEVRHLLQT--GSV--------GDVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLRTA-SERRQLVSRVD----GSDPAAAAAQ---RQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGK 525
            M+S  F+ Y EE L+L  +VR  L +  G +         D+      L +  DLL+Q+ +EARS  DA+ + +L  +V+  K+ L  LR+  +  R  + R +    GS P +  A    R+R+L     L +Q   L  A+  + ETE  A E+T ELGRNRE I+SAH +VK+   + + A++++  M +
Sbjct:   16 MSSIPFDRYDEEFLSLTEQVRRSLASLEGDIESGGSSVESDLKMTANLLSQCDDLLKQMGLEARSVGDASAKRELLDKVKKCKSKLQGLRSEYNAARNKMDRANLGLGGSAPHSGGASNDHRERLLKTSGQLEEQNRTLDRARRVMAETEETALEITEELGRNREKIESAHGRVKDVSGLTNRARRIVQSMNR 208          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A7S0FKY8_9STRA (Hypothetical protein (Fragment) n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0FKY8_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 2.560e-12
Identity = 63/193 (32.64%), Postives = 100/193 (51.81%), Query Frame = 1
Query:   16 FESYVEEILTLAAEVRHLLQTGSVGDVDRAVLQ---------LGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLR-------TASERRQLVSRVDGSDPAA-------AAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGK 525
            F+ Y EE   L ++VR  LQ+    D++ + +Q         L +  DLL+Q+ +EAR   +A T+A    +V+  K+SL+ LR       T  ER  L   +DGS           +  QR R+L   D +A Q   L  A+  + +TE  A E+T+EL RNRE I+SAH +V+E   + + A++++  M +
Sbjct:    6 FDRYDEEFEELTSQVRRSLQSLKTADIESSSVQSDLQMTANLLSQCDDLLKQMSIEARGVDNADTKAKCLYKVRQCKSSLSDLRSEYETENTKFERSALG--LDGSSGRGXXXXGGLSNEQRGRLLKTNDQIASQNRTLDNARRIMSDTEETAMEITSELARNREKIESAHGRVREVSGLTNRARRIVQSMSR 196          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: B8CG98_THAPS (V-SNARE domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CG98_THAPS)

HSP 1 Score: 68.6 bits (166), Expect = 6.750e-11
Identity = 69/196 (35.20%), Postives = 96/196 (48.98%), Query Frame = 1
Query:   16 FESYVEEILTLAAEV----RHLLQTGSVG-------DVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLR-------TASERRQLVSRVD-----GSDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGKWYR 534
            FE Y EE L+L  +V    R L  + S G       D+  A   L +A DLL+Q+ +EAR   DA  + DL  +V+  K  LA+LR       +  ER  L    D      +    ++  ++R+L   D L  Q+  LA A+  + ETEGVA E+T ELGR+RETI SAH + KE  +   E      +   W R
Sbjct:    7 FERYDEEFLSLTEQVTSKLRSLDPSTSSGLPPTAEADIKMAHNLLLQADDLLKQMGLEARGVDDAGVKRDLLGKVRVCKTRLANLRDDYEAAKSNVERNSLGLNSDIESGGRNSRGRSSGSKERLLSNTDALQSQSETLANARSIMAETEGVAMEITEELGRHRETITSAHGRGKEDSAEYGEEGGAAEVDFVWCR 202          
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Match: A0A7S2UKP9_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UKP9_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 2.910e-9
Identity = 60/192 (31.25%), Postives = 96/192 (50.00%), Query Frame = 1
Query:   16 FESYVEEILTLAAEVRHLL-------------QTGSVGDVDRAVLQLGEAHDLLRQLEVEARSATDAATRADLQAQVQAHKASLASLR-------TASERRQLV--SRVDGSDPAAAAAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQSAHSKVKETGSMMDEAKQLLNMMGK 525
            FE Y EE  +L  +V   L             QT     +      L +  DLL+Q+ VEAR   DA+ + DL  +V+  K  LA+LR       +  +R+ L+  + +  +     +  RQR+L+    ++ Q   L  A+  + ETE VA E+T+EL RNRETI+SAH +V+    + + A+++L  M +
Sbjct:    7 FERYDEEFDSLTQQVEQSLTKLKELPEKEDNNQTEESSSLRFTTGLLAQCDDLLKQMAVEARGVDDASLKRDLLHKVRICKTKLANLRDDVKTIQSDLDRKSLLRSNSLSQNGKQGNSDSRQRLLETTAHMSAQNDTLDHARRVMAETEDVALEITSELSRNRETIESAHGRVRNVSGLTNRARRILQNMSR 198          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347920 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 20
Match NameE-valueIdentityDescription
A0A835ZAQ6_9STRA1.570e-109100.00V-SNARE domain-containing protein n=1 Tax=Tribonem... [more]
A0A836CJ32_9STRA2.440e-3346.88Soluble NSF attachment protein receptor n=1 Tax=Tr... [more]
A0A7S2V424_9STRA1.030e-1939.27Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A6U0HSB3_9STRA7.430e-1634.52Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
A0A6S8XXA7_9STRA1.290e-1535.75Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A7R9ZE01_9STRA3.670e-1332.65Hypothetical protein n=1 Tax=Pseudictyota dubia Ta... [more]
A0A7S4MGJ4_9STRA2.500e-1233.16Hypothetical protein n=1 Tax=Odontella aurita TaxI... [more]
A0A7S0FKY8_9STRA2.560e-1232.64Hypothetical protein (Fragment) n=1 Tax=Minutocell... [more]
B8CG98_THAPS6.750e-1135.20V-SNARE domain-containing protein n=1 Tax=Thalassi... [more]
A0A7S2UKP9_9STRA2.910e-931.25Hypothetical protein n=1 Tax=Attheya septentrional... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:529614..532134 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|347920|estExt_Genemark1.C_Ctg_170071
BRITEko00000,ko00001,ko04131
KEGG Pathwayko04130,ko04138,map04130,map04138
KEGG koko:K08493
DescriptionSnare region anchored in the vesicle membrane C-terminus
COG categoryU
Max annot lvl2836|Bacillariophyta
EggNOG OGsKOG1666@1|root,KOG1666@2759|Eukaryota,2XCYN@2836|Bacillariophyta
Evalue1.57e-13
Seed ortholog2850.Phatr40521
Hectar predicted targeting categoryother localisation
TranscriptId348242
TrackFilteredModels1
ProteinId347920
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347920gene_3380Tribonema minus UTEX_B_3156 geneContig_17 529614..532134 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347920Trimin1|347920|estExt_Genemark1.C_Ctg_170071Tribonema minus UTEX_B_3156 polypeptideContig_17 529626..532134 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_3380_4exon_3380_4Tribonema minus UTEX_B_3156 exonContig_17 529614..529700 -
exon_3380_3exon_3380_3Tribonema minus UTEX_B_3156 exonContig_17 530684..530860 -
exon_3380_2exon_3380_2Tribonema minus UTEX_B_3156 exonContig_17 531757..531840 -
exon_3380_1exon_3380_1Tribonema minus UTEX_B_3156 exonContig_17 531931..532134 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_3380UTR3_3380Tribonema minus UTEX_B_3156 three_prime_UTRContig_17 529614..529625 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_3380CDS_3380Tribonema minus UTEX_B_3156 CDSContig_17 531931..532134 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_3380 ID=mRNA_3380|Name=jgi.p|Trimin1|347920|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=552bp|location=Sequence derived from alignment at Contig_17:529614..532134- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGTCGCCCATGTTTGAGTCCTATGTGGAAGAGATCTTGACCTTGGC
TGCCGAAGTGCGCCACCTCTTGCAGACAGGGTCGGTCGGAGACGTGGACA
GAGCTGTGCTGCAGTTGGGGGAGGCGCACGACTTGCTGAGACAGCTGGAA
GTCGAGGCCAGGAGTGCGACGGATGCCGCCACTCGTGCAGACTTGCAGGC
ACAGGTGCAGGCTCACAAGGCTTCGCTCGCATCACTCAGGACTGCCTCTG
AACGGCGCCAGCTGGTATCTCGCGTCGACGGCTCGGATCCAGCAGCGGCG
GCGGCGCAGCGGCAGCGCATGTTGGACGCGGGCGACACACTCGCTCAGCA
GGCGGCCATGCTCGCTGCCGCCAAGGGCGCTCTGCTGGAAACGGAGGGCG
TCGCAGGAGAGGTCACCGCAGAGCTGGGCCGCAACAGGGAAACGATACAG
AGTGCGCACAGCAAGGTCAAGGAAACGGGCTCGATGATGGACGAGGCCAA
GCAATTGCTCAACATGATGGGAAAATGGTACCGGCGATGATGGTGACGCT
GC
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protein sequence of jgi.p|Trimin1|347920

>Trimin1|347920|estExt_Genemark1.C_Ctg_170071 ID=Trimin1|347920|estExt_Genemark1.C_Ctg_170071|Name=jgi.p|Trimin1|347920|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=180bp
MASPMFESYVEEILTLAAEVRHLLQTGSVGDVDRAVLQLGEAHDLLRQLE
VEARSATDAATRADLQAQVQAHKASLASLRTASERRQLVSRVDGSDPAAA
AAQRQRMLDAGDTLAQQAAMLAAAKGALLETEGVAGEVTAELGRNRETIQ
SAHSKVKETGSMMDEAKQLLNMMGKWYRR*
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mRNA from alignment at Contig_17:529614..532134-

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_3380 ID=mRNA_3380|Name=jgi.p|Trimin1|347920|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2521bp|location=Sequence derived from alignment at Contig_17:529614..532134- (Tribonema minus UTEX_B_3156 )
ATGGCGTCGCCCATGTTTGAGTCCTATGTGGAAGAGATCTTGACCTTGGC TGCCGAAGTGCGCCACCTCTTGCAGACAGGGTCGGTCGGAGACGTGGACA GAGCTGTGCTGCAGTTGGGGGAGGCGCACGACTTGCTGAGACAGCTGGAA GTCGAGGCCAGGAGTGCGACGGATGCCGCCACTCGTGCAGACTTGCAGGC ACAGGTAATGCCAATTCCGTTGCATTCATGGGCAAACATTCTTGTGGAGA CACACGAGCTCAAACTGGCACATTGCCATGCTCCCTCACTGCAGGTGCAG GCTCACAAGGCTTCGCTCGCATCACTCAGGACTGCCTCTGAACGGCGCCA GCTGGTATCTCGCGTCGACGGCTCGGATGTGAGTTTAATGTGCAGAATTC TGCAAATGCAATCTATCTATCAAAGGAGTCTGATCTGGTAGACACAGCGG GCGCTTGCCGCGTTCCAGTTGCGACCGAAAGCGTTCGTCTACCAGTTCGT CCAATGCGTGACGCACCGTCCACAGCTATTTCTCTGAGTTGTGTTACAGG TGTTTAATGGCACACAGCCAACTCTCAGCGTACGATGATCCTCCCTGGAT GTATCGCCCGGGGACGGTATATCTGGGGCAAGCGTCTTGTTGCTCCACAC ACCAGCACGGCGTACCCTGGACCATGCTGAACAACGCAAGGGCTATTTCA CCTTACGCATGACAACTGCTCAGTGCTGATGTTGTGGACTGTGTTCAGAG ACATGGCAACTCTGCCCCTCCCTATCACCGGAACCAAAGTGAGAAGGATT CGGTGCTAAGCGCGGCCATGGCTTTGCAGCTGTTTCAGATGTAGTGCAGC GTACCATTTCAAGGTAAGAAAGGTGTGATTGCTGAACTCAGCACAGCTTA GTACTTCTGCACGTGCGCATGCTGCAAGCTGCAGCCGCGGGGCCTCACTT GGCCTGCTACCTGGCCAGCCCCCCCCCCCCCGCGCGCCCTTTCCAGCGGT ATTCACAAATCTTCTTCCAGGCAGTCGCTGTCCAGTGGCGCAGGGGACTG CTGCGGCTGCTGCTCAGGTTCTTCTACGCTGAAACAGCATGTTCCCAGAT CTCACGCGAATCACGATGCGATGTGCGCTGCCGGGAAAGCCTACCTTAAT GATGGTACATGGTAGCAAGATAGTTGTCCTTGCTCACCGCATCTTCCATC AGACGACTGCAATATCTGAGCTGCCAAGCGGCATAATTATAACAAACAAG GACGACTGCTTGTTGCATCCCCAGCCAGCAGCGGCGGCGGCGCAGCGGCA GCGCATGTTGGACGCGGGCGACACACTCGCTCAGCAGGCGGCCATGCTCG CTGCCGCCAAGGGCGCTCTGCTGGAAACGGAGGGCGTCGCAGGAGAGGTC ACCGCAGAGCTGGGCCGCAACAGGGAAACGATACAGAGTGCGCACAGCAA GGTGCGCATTCTTCCCGGTCAAGCGACGACTGGGACCGATGCATGAACGC ACCAGGCCAATTCGAGTACTTGAGATGCATCCCGCCTAGCTGGAGAGGTT GTTGCGCCGTGCCAGCGCAGTGGGTATGTCATCTGTTGTCTCAAGCCGGC CATGCGAGACGCGCCCGCTGCTGCTCCGTCGTAAGGACGTGCGAAGCTGG TGTGTCACGGAAGTCAAAATACTGTGTGTGGGCCTTCAAACCCCTATGTG CCTGCCTTATGTATGTGCGTGGAGTGCAGCAATGCTGCCGACCGAGCTTT GCATAGCGGACTGCACATGGCCATTGCGCGGCAGGCATTCTGGGCACCGA GAAGGTGGCCGGTTGTGGGCCTTTTGTGATCAGTAAGGCGCTCGTTTGAC CGTGGGAACACGCTAGTTGGGGTTACTGGGAACACGCCATCATTTCATGC CTTCATGCTGACCATTGCTGTGGCATGATGACACTCAACAGGCGCAGCCT CCTGGCTGCCTTTGAAATGCGACCAATGCAATGCGCTTGGTCCATTGGCG CTCATTTTCTGCCATTGAGTTGCAGCATGGCTCAGCGGCGTACTTTGACG GTGTACTGCCTGTGTGGTCCCACTCAGTACAGCGAATGCTGGCAGCAATC ATGCGCCGTCGGCGCCAGTTGCGCTTGTATGACGTCAGCTCATGAGTCAT TCCTGCTCGCGCTGCATCACACACAATTCTCTACTGTAATCGCGCCCGTG CGTGCATGCTGGCACTCATCCGATTTCAGGTGCGCTCGTCGCCTCTTTCC TTGTACTCAATGCGCCGCGCCCGTTGCAGCGCAGCGCTCCTGCGTGTCCA GCAACAGCACAGGGCGCCGTGCTCCGCGCACTCTCCTGCACACGTCCATG ATGGGTAGTGACTGTTTCTGGTGATGAGTGTATCGGCCACATTGCTCATC ACCACGTCCCTGCTGCCACTTGCAACTGCCACAGGTCAAGGAAACGGGCT CGATGATGGACGAGGCCAAGCAATTGCTCAACATGATGGGAAAATGGTAC CGGCGATGATGGTGACGCTGC
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Coding sequence (CDS) from alignment at Contig_17:529614..532134-

>mRNA_3380 ID=mRNA_3380|Name=jgi.p|Trimin1|347920|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=540bp|location=Sequence derived from alignment at Contig_17:529614..532134- (Tribonema minus UTEX_B_3156 )
ATGGCGTCGCCCATGTTTGAGTCCTATGTGGAAGAGATCTTGACCTTGGC
TGCCGAAGTGCGCCACCTCTTGCAGACAGGGTCGGTCGGAGACGTGGACA
GAGCTGTGCTGCAGTTGGGGGAGGCGCACGACTTGCTGAGACAGCTGGAA
GTCGAGGCCAGGAGTGCGACGGATGCCGCCACTCGTGCAGACTTGCAGGC
ACAGGTGCAGGCTCACAAGGCTTCGCTCGCATCACTCAGGACTGCCTCTG
AACGGCGCCAGCTGGTATCTCGCGTCGACGGCTCGGATCCAGCAGCGGCG
GCGGCGCAGCGGCAGCGCATGTTGGACGCGGGCGACACACTCGCTCAGCA
GGCGGCCATGCTCGCTGCCGCCAAGGGCGCTCTGCTGGAAACGGAGGGCG
TCGCAGGAGAGGTCACCGCAGAGCTGGGCCGCAACAGGGAAACGATACAG
AGTGCGCACAGCAAGGTCAAGGAAACGGGCTCGATGATGGACGAGGCCAA
GCAATTGCTCAACATGATGGGAAAATGGTACCGGCGATGA
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