Trimin1|347902|estExt_Genemark1.C_Ctg_170046 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347902
Unique NameTrimin1|347902|estExt_Genemark1.C_Ctg_170046
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length85
Homology
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BLAST of jgi.p|Trimin1|347902 vs. uniprot
Match: A0A836CJN7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJN7_9STRA)

HSP 1 Score: 153 bits (386), Expect = 6.420e-47
Identity = 84/84 (100.00%), Postives = 84/84 (100.00%), Query Frame = 0 
Query:    1 MRTVAVCLLCLAASANAFLFAPAGVRSTALAQSTKSTTQVEKVVKDRQFNELLTKLNDSSIRGLTSDDKTPTYAVSADDESKSE 84
            MRTVAVCLLCLAASANAFLFAPAGVRSTALAQSTKSTTQVEKVVKDRQFNELLTKLNDSSIRGLTSDDKTPTYAVSADDESKSE
Sbjct:    1 MRTVAVCLLCLAASANAFLFAPAGVRSTALAQSTKSTTQVEKVVKDRQFNELLTKLNDSSIRGLTSDDKTPTYAVSADDESKSE 84
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347902 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CJN7_9STRA6.420e-47100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:347724..349302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347902mRNA_3353Tribonema minus UTEX_B_3156 mRNAContig_17 347679..349605 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347902|estExt_Genemark1.C_Ctg_170046 ID=Trimin1|347902|estExt_Genemark1.C_Ctg_170046|Name=jgi.p|Trimin1|347902|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=85bp
MRTVAVCLLCLAASANAFLFAPAGVRSTALAQSTKSTTQVEKVVKDRQFN
ELLTKLNDSSIRGLTSDDKTPTYAVSADDESKSE*
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