Trimin1|347881|estExt_Genemark1.C_Ctg_170002 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|347881
Unique NameTrimin1|347881|estExt_Genemark1.C_Ctg_170002
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length415
Homology
BLAST of jgi.p|Trimin1|347881 vs. uniprot
Match: A0A836CIJ6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIJ6_9STRA)

HSP 1 Score: 614 bits (1583), Expect = 1.530e-218
Identity = 311/311 (100.00%), Postives = 311/311 (100.00%), Query Frame = 0
Query:  104 ASGEVTPPAELSPLHVGSVLHAPTRYSQKAEEEKARSKRNRMTQKAACITATARHGADVADANSALAQLQGLTAKAFATEGYTILPHHPRLQALARAILDAVPADMNPDVAPWEKVFNTVDGTRKQVKMEDVKRATSKYMPVKRLLVDELAPVVNDILLGLSGLEVVKPALLLSKRTARRDALAQQPHRDWPLKQLLAAIGNGQDGFPVGVLLSLQDGGQLHVWPGSHDTPKEQPIKLSDRVTIRLNAGDIVLFHGALVHAGAGYVGKPGTYHLRVHFYTQSAHGRSAWTIFNETEELQLIDEDQCRRTRR 414
            ASGEVTPPAELSPLHVGSVLHAPTRYSQKAEEEKARSKRNRMTQKAACITATARHGADVADANSALAQLQGLTAKAFATEGYTILPHHPRLQALARAILDAVPADMNPDVAPWEKVFNTVDGTRKQVKMEDVKRATSKYMPVKRLLVDELAPVVNDILLGLSGLEVVKPALLLSKRTARRDALAQQPHRDWPLKQLLAAIGNGQDGFPVGVLLSLQDGGQLHVWPGSHDTPKEQPIKLSDRVTIRLNAGDIVLFHGALVHAGAGYVGKPGTYHLRVHFYTQSAHGRSAWTIFNETEELQLIDEDQCRRTRR
Sbjct:  104 ASGEVTPPAELSPLHVGSVLHAPTRYSQKAEEEKARSKRNRMTQKAACITATARHGADVADANSALAQLQGLTAKAFATEGYTILPHHPRLQALARAILDAVPADMNPDVAPWEKVFNTVDGTRKQVKMEDVKRATSKYMPVKRLLVDELAPVVNDILLGLSGLEVVKPALLLSKRTARRDALAQQPHRDWPLKQLLAAIGNGQDGFPVGVLLSLQDGGQLHVWPGSHDTPKEQPIKLSDRVTIRLNAGDIVLFHGALVHAGAGYVGKPGTYHLRVHFYTQSAHGRSAWTIFNETEELQLIDEDQCRRTRR 414          
BLAST of jgi.p|Trimin1|347881 vs. uniprot
Match: A0A835YNV3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNV3_9STRA)

HSP 1 Score: 257 bits (656), Expect = 2.930e-77
Identity = 130/241 (53.94%), Postives = 168/241 (69.71%), Query Frame = 0
Query:  169 LAQLQGLTAKAFATEGYTILPHHPRLQALARAILDAVPADMNPDVAPWEKVFNTVDGTRKQVKMEDVKRATSKYMPVKRLLVDELAPVVNDILLGLSGLEVVKPALLLSKRTARRDALAQQPHRDWPLKQLLAAIGNGQDGFPVGVLLSLQDGGQLHVWPGSHDTPKEQPIKLSDRVTIRLNAGDIVLFHGALVHAGAGYVGKPGTYHLRVHFYTQSAHGRSAWTIFNETEELQLIDEDQC 409
            +AQLQ  T ++ AT+GY ++P +    ALAR +L A+P  +N    PWE VFNTV GTR QVK+ DV    S +  VK+L++ EL P++N+ LLGLS +EV +PA+LLSK+T    A+AQ PHRDWP+++L  A+    DGFPVGVLLSL DGG LH+WPGS D    Q ++  DR+++ L AGDIVLFHGA+VH GAGY G  G YHLR+HFYTQS+HG + W I NETE     +  QC
Sbjct:  216 VAQLQDTTTRSLATDGYYVVPGNETFAALARRLLTAMPTTINTAADPWENVFNTVPGTRCQVKLPDV-GPRSPFAAVKQLVMKELVPLINETLLGLSDVEVTRPAILLSKKTPAEHAIAQGPHRDWPVRRLKNALKK-HDGFPVGVLLSLHDGGILHLWPGSFDA---QEVREQDRISVNLRAGDIVLFHGAIVHEGAGYQGAAGEYHLRLHFYTQSSHGVNPWPISNETEHCHTSEWHQC 451          
BLAST of jgi.p|Trimin1|347881 vs. uniprot
Match: A0A836CGF2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGF2_9STRA)

HSP 1 Score: 256 bits (654), Expect = 3.150e-76
Identity = 129/236 (54.66%), Postives = 169/236 (71.61%), Query Frame = 0
Query:  169 LAQLQGLTAKAFATEGYTILPHHPRLQALARAILDAVPADMNPDVAPWEKVFNTVDGTRKQVKMEDVKRATSKYMPVKRLLVDELAPVVNDILLGLSGLEVVKPALLLSKRTARRDALAQQPHRDWPLKQLLAAIGNGQDGFPVGVLLSLQDGGQLHVWPGSHDTPKEQPIKLSDRVTIRLNAGDIVLFHGALVHAGAGYVGKPGTYHLRVHFYTQSAHGRSAWTIFNETEELQLI 404
            +AQLQ  T ++ AT+GY ++P +    ALA+ +L A+P  +N    PWE VFNTV GTR QVK+ DV  A S +  VK+L++ EL P++N+ LLGLS +EV +PA+LLSK+T    A+AQ PHRDWP+++L  A+    DGFPVGVLLSL DGG LH+WPGS D    Q ++  DR+++ L AGDIVLFHGA+VH GAGY G  G YHLR+HFYTQSAHG + W I NETE ++ +
Sbjct:  336 VAQLQDTTTRSLATDGYCVVPGNETFAALAQRLLTAMPTTINTAADPWENVFNTVPGTRCQVKLPDV-GARSPFAAVKQLVMKELVPLINETLLGLSDVEVTRPAILLSKKTPAEHAIAQGPHRDWPVRRLKYALKK-HDGFPVGVLLSLHDGGTLHLWPGSFDA---QEVREQDRISVNLRAGDIVLFHGAVVHEGAGYQGAAGEYHLRLHFYTQSAHGVNPWPISNETEPVRKM 566          
BLAST of jgi.p|Trimin1|347881 vs. uniprot
Match: A0A836CEY9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEY9_9STRA)

HSP 1 Score: 246 bits (628), Expect = 1.820e-73
Identity = 125/235 (53.19%), Postives = 161/235 (68.51%), Query Frame = 0
Query:  169 LAQLQGLTAKAFATEGYTILPHHPRLQALARAILDAVPADMNPDVAPWEKVFNTVDGTRKQVKMEDVKRATSKYMPVKRLLVDELAPVVNDILLGLSGLEVVKPALLLSKRTARRDALAQQPHRDWPLKQLLAAIGNGQDGFPVGVLLSLQDGGQLHVWPGSHDTPKEQPIKLSDRVTIRLNAGDIVLFHGALVHAGAGYVGKPGTYHLRVHFYTQSAHGRSAWTIFNETEELQL 403
            LAQL+  T +A AT+G+ +L  +P    L + +L  VP+ +N    PWE +FNTV GTR Q+K+ DV  A S Y  VK L++ ELAP+++  L+GLS   V +PALLLSK T+  DA++Q PHRDWPLK+L  A+    DGFPVGVL+SL D G+LH+WP S D      +   DR+TI LNAGDI++FHGALVH GAGY+G+ G YHLR+HFYTQS  G + W I NETE   L
Sbjct:   94 LAQLESATTRALATDGFCVLKQNPAFIDLTQRLLAVVPSTINTAARPWENIFNTVPGTRCQLKLTDV-GARSPYAEVKELVLHELAPLIDRTLMGLSHKGVYRPALLLSKMTSAADAMSQGPHRDWPLKRLKTAL-RVNDGFPVGVLMSLHDNGKLHLWPRSFDATH---VNADDRITITLNAGDIIIFHGALVHEGAGYIGEEGEYHLRLHFYTQSTRGANVWQISNETEHASL 323          
BLAST of jgi.p|Trimin1|347881 vs. uniprot
Match: A0A836CHB8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHB8_9STRA)

HSP 1 Score: 215 bits (547), Expect = 7.290e-65
Identity = 107/200 (53.50%), Postives = 141/200 (70.50%), Query Frame = 0
Query:  205 VPADMNPDVAPWEKVFNTVDGTRKQVKMEDVKRATSKYMPVKRLLVDELAPVVNDILLGLSGLEVVKPALLLSKRTARRDALAQQPHRDWPLKQLLAAIGNGQDGFPVGVLLSLQDGGQLHVWPGSHDTPKEQPIKLSDRVTIRLNAGDIVLFHGALVHAGAGYVGKPGTYHLRVHFYTQSAHGRSAWTIFNETEELQLI 404
            +P  +N    PWE VFN V GTR QVK+ DV  A S +  VK+L++ EL P++N+ LLGLS +EV +PA+LLSK+T    A+ Q PHRDWP ++L  A+    DGFPVGVLLSL +GG LH+WPGS D    + ++  DR++++L A DIV+FHGA+VH GAGY G  G +HLR+HFYTQSA G + W I NETE ++ I
Sbjct:    1 MPTTINTAADPWENVFNAVPGTRCQVKLPDV-GARSPFAAVKQLVMKELVPLINETLLGLSDMEVTRPAILLSKKTPAEHAITQGPHRDWPTRRLKNALKK-HDGFPVGVLLSLHNGGVLHLWPGSFDA---EEVREQDRISVKLQARDIVMFHGAIVHEGAGYQGAVGEHHLRLHFYTQSARGINPWPISNETEHVRTI 195          
BLAST of jgi.p|Trimin1|347881 vs. uniprot
Match: A0A835YKI9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKI9_9STRA)

HSP 1 Score: 202 bits (515), Expect = 6.380e-60
Identity = 102/180 (56.67%), Postives = 129/180 (71.67%), Query Frame = 0
Query:  215 PWEKVFNTVDGTRKQVKMEDVKRATSKYMPVKRLLVDELAPVVNDILLGLSGLEVVKPALLLSKRTARRDALAQQPHRDWPLKQLLAAIGNGQDGFPVGVLLSLQDGGQLHVWPGSHDTPKEQPIKLSDRVTIRLNAGDIVLFHGALVHAGAGYVGKPGTYHLRVHFYTQSAHGRSAWTI 394
            PWE++FN V  TR QVK+ DV  + S ++  KRL+  EL P++N  LLGL   EV +PALLLS +T++  A AQ PHRDW L  L AA+ +    FPVGV++SL D G+LHVWPGS D  +   +   DRVT+RL+AGDI+LFHGAL+HAGAGY G  G YHLR+HFYTQ+AHGR AW +
Sbjct:   21 PWERIFNPVH-TRHQVKLFDV-ASRSPFVKAKRLVEQELGPLINRTLLGLGDREVTRPALLLSNKTSKELAHAQPPHRDWMLNNLKAALKHNNS-FPVGVIISLHDSGELHVWPGSFDATE---VNEKDRVTVRLDAGDIILFHGALIHAGAGYEGDDGEYHLRLHFYTQTAHGREAWPV 194          
BLAST of jgi.p|Trimin1|347881 vs. uniprot
Match: A0A835Z366_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z366_9STRA)

HSP 1 Score: 194 bits (492), Expect = 2.140e-55
Identity = 100/236 (42.37%), Postives = 145/236 (61.44%), Query Frame = 0
Query:  169 LAQLQGLTAKAFATEGYTILPHHPRLQALARAILDAVPADMNPDVAPWEKVFNTVDGTRKQVKMEDVKRATSKYMPVKRLLVDELAPVVNDILLGLSGLEVVKPALLLSKRTARRDALAQQPHRDWPLKQLLAAIGNGQDGFPVGVLLSLQDGGQLHVWPGSHDTPKEQPIKLSDRVTIRLNAGDIVLFHGALVHAGAGYVGKPGTYHLRVHFYTQSAHGRSAWTIFNETEELQLI 404
            +AQL+    +A +T+GY +   +   ++ A  +L  +P D++     W ++FN+V+GTR Q+ + +V +  S Y   K+  + E+AP++N  LLG    +VVK A+LLSK+T+  DAL+Q PHRDWPL                    SL D G  H+WPGS D      ++  +R+T+ LNAGD++LFHGALVH GAGY G  G YH+R+HFYTQSAHG +AW I +ETE + L+
Sbjct:   78 IAQLEATAIRALSTDGYCVFRGNDAFRSKALGLLAEMPDDIDTSTH-WRRIFNSVEGTRYQLPLPEVGKR-SPYTKAKQFALSEIAPLINRTLLGSRLKKVVKAAILLSKKTSAADALSQGPHRDWPLD-------------------SLHDNGAFHLWPGSFDATS---VRAQERITVHLNAGDVILFHGALVHEGAGYEGAAGEYHMRLHFYTQSAHGPNAWPIADETERVALV 289          
BLAST of jgi.p|Trimin1|347881 vs. uniprot
Match: A0A835YIS5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIS5_9STRA)

HSP 1 Score: 168 bits (426), Expect = 1.240e-46
Identity = 95/199 (47.74%), Postives = 127/199 (63.82%), Query Frame = 0
Query:  215 PWEKVFNTVDGTRKQVKMEDVKRATSKYMPVKRLLVDELAPVVNDILLGLSGLEVVKPALLLSKRTARRDALAQQ----PHRDWPLKQLLAAIGNGQDGFPVGVLLSLQDGGQLHVWPGSHDTPKEQPIKLSDRVTIRLNAGDIVLFHGALVHAGAGYVGKPGTYHLRVHFYTQSAHGRSAWTIFNETEELQLIDEDQC 409
            PWE++ N V  TR QVK+ DV  + S  +  KRL+  EL P++N  LLGL G    + +   S  T ++D +  +    P     L  L AA+ +  D FPVGV +SL DGG+LHVWPGS DT +   +   DRVT+RL+A DI+LFHGAL+HAGAGY G  G YHLR+H+YTQ+AHGR AW + N+TE +  ID+ + 
Sbjct:   21 PWERIVNPVH-TRHQVKLFDV-ASRSPLVKAKRLVEQELGPLINRTLLGLGG----QGSDAASTSTFQQDVVGARTCAAPSPRLMLNNLKAALKHN-DSFPVGVNISLHDGGELHVWPGSFDTTE---VNKKDRVTVRLDARDIILFHGALIHAGAGYEGDDGEYHLRLHYYTQTAHGRDAWPVVNKTELVGHIDDAEA 209          
BLAST of jgi.p|Trimin1|347881 vs. uniprot
Match: A0A835ZF14_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF14_9STRA)

HSP 1 Score: 165 bits (417), Expect = 7.620e-43
Identity = 100/253 (39.53%), Postives = 148/253 (58.50%), Query Frame = 0
Query:  162 VADANSALAQLQGLTAKAFATEGYTILPHHPR---LQALARAILDAVPADMNPDVAP-WEKVFNTVDGTRKQVKMEDVKRATSKYMPVKRLLVDELAPVVNDILLGLSGLEVVKPALLLSKRTARRDALAQQPHRDWPLKQLLAAIGNGQDGFPVGVLLSLQDGGQLHVWPGSHDTPKEQPIKLSDRVTIRLNAGDIVLFHGALVHAGAGYV---GKPG-TYHLRVHFYTQSAHGR-SAWTIFNETEELQLID 405
            +ADA  A AQL+    K  A  GYT++        L ++   +L  +P     +V   W  + N V   R  +K+ ++ +   +Y+  K +++++L+P  ND+L G     V KP+ LLS++T + DAL Q PHRDW L Q+L A     DG PVG+++SLQDGG  H+WP SHD    Q ++ +  + I+ NAGDI+LFHGALV  GAGY    G+ G  YHLR+HFY +   G+ +AW + N+ E + LI+
Sbjct:  189 MADARVAKAQLEANLTKLLAVPGYTVVRRSEGDDCLSSIVEELLKTLPELTEKEVTTKWSVLRNNVLNCRYHMKLFEMVKG--RYLGAKNVVMNKLSPYNNDVLFGNRDRAVHKPSFLLSRKTEKADALGQGPHRDWVLNQILDAQQT-TDGCPVGIIISLQDGGAFHLWPNSHDA---QEVRANGMMKIQFNAGDILLFHGALVREGAGYELAEGEQGWAYHLRLHFYLRITIGKDNAWEVDNQFELVPLIE 435          
BLAST of jgi.p|Trimin1|347881 vs. uniprot
Match: A0A836CIB9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIB9_9STRA)

HSP 1 Score: 103 bits (257), Expect = 1.010e-20
Identity = 47/77 (61.04%), Postives = 58/77 (75.32%), Query Frame = 0
Query:  310 FPVGVLLSLQDGGQLHVWPGSHDTPKEQPIKLSDRVTIRLNAGDIVLFHGALVHAGAGYVGKPGTYHLRVHFYTQSA 386
            FPVGVL+SL DGG  H+W GS D  +   ++  DR+TIRL+AGD+V+FH ALVH GAGY G  G  H+R+HFYTQSA
Sbjct:   68 FPVGVLMSLHDGGAFHLWAGSFDATE---VRKEDRITIRLDAGDVVIFHSALVHEGAGYEGDEGDVHMRLHFYTQSA 141          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|347881 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 12
Match NameE-valueIdentityDescription
A0A836CIJ6_9STRA1.530e-218100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YNV3_9STRA2.930e-7753.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CGF2_9STRA3.150e-7654.66Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CEY9_9STRA1.820e-7353.19Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CHB8_9STRA7.290e-6553.50Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YKI9_9STRA6.380e-6056.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z366_9STRA2.140e-5542.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YIS5_9STRA1.240e-4647.74Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZF14_9STRA7.620e-4339.53Uncharacterized protein (Fragment) n=1 Tax=Tribone... [more]
A0A836CIB9_9STRA1.010e-2061.04Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008775Phytanoyl-CoA dioxygenasePFAMPF05721PhyHcoord: 202..366
e-value: 6.4E-5
score: 23.3
NoneNo IPR availableGENE3D2.60.120.620q2cbj1_9rhob like domaincoord: 161..407
e-value: 1.8E-14
score: 55.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 59..75
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 115..142
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 47..83
NoneNo IPR availableSUPERFAMILY51197Clavaminate synthase-likecoord: 283..368

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:5077..10552 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|347881mRNA_3308Tribonema minus UTEX_B_3156 mRNAContig_17 5077..10707 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|347881|estExt_Genemark1.C_Ctg_170002 ID=Trimin1|347881|estExt_Genemark1.C_Ctg_170002|Name=jgi.p|Trimin1|347881|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=415bp
MLQSLKLAFWNPPAAAPAAAIVEAAHLNGAAAAGTGAAAAAALYGAPPPP
PPAAAKKPAGKKRTPEEEAARQRGEEAGAEGGGSGGAGIAAAAAAVAAAA
AASASGEVTPPAELSPLHVGSVLHAPTRYSQKAEEEKARSKRNRMTQKAA
CITATARHGADVADANSALAQLQGLTAKAFATEGYTILPHHPRLQALARA
ILDAVPADMNPDVAPWEKVFNTVDGTRKQVKMEDVKRATSKYMPVKRLLV
DELAPVVNDILLGLSGLEVVKPALLLSKRTARRDALAQQPHRDWPLKQLL
AAIGNGQDGFPVGVLLSLQDGGQLHVWPGSHDTPKEQPIKLSDRVTIRLN
AGDIVLFHGALVHAGAGYVGKPGTYHLRVHFYTQSAHGRSAWTIFNETEE
LQLIDEDQCRRTRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008775Phytyl_CoA_dOase