mRNA_3351 (mRNA) Tribonema minus UTEX_B_3156
Overview
Homology
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: A0A835Z933_9STRA (Hist_deacetyl domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z933_9STRA) HSP 1 Score: 657 bits (1694), Expect = 1.120e-237 Identity = 347/347 (100.00%), Postives = 347/347 (100.00%), Query Frame = 1 Query: 1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAAHSLAQQGAALVRWP 1041 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAAHSLAQQGAALVRWP Sbjct: 1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAAHSLAQQGAALVRWP 347
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: D7FY69_ECTSI (Hist_deacetyl domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FY69_ECTSI) HSP 1 Score: 370 bits (949), Expect = 2.000e-124 Identity = 197/338 (58.28%), Postives = 230/338 (68.05%), Query Frame = 1 Query: 1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDA--GA---PFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAA 999 DVY V LP HRFPM KYR+VRE +Q EL G + +F+VSP AS DDL TTH YV R G T +E+R VGFPWSE V R+LSS+GGTVAA HAVC RD GA P LF+GH+AGGTHHAF DRGEGFCVFSDIAVAANVALRD+ E +R+ILI+D DVHQGNGNA LF V TFS+HCKANYFS ++ SD+D+EV+ AGD+ YLSL+ + +P L+D VRPDL+FYQ GVDPL DRLG L LTREGL RNR+VY AL R V+TMGGGYP+D+ SED+ IV +H DVY AA Sbjct: 15 DVYRVDLPDGHRFPMEKYRLVREGLQGELLGR-------------------VNGIPAVSFAVSPTASLDDLCTTHDKGYVERYFEGRFTNRENRTVGFPWSEASVKRSLSSVGGTVAAMHAVCADGELRDRRPGARRTPPSLFSGHIAGGTHHAFSDRGEGFCVFSDIAVAANVALRDYPETIRQILIVDCDVHQGNGNAVLFKSKPEVSTFSIHCKANYFSEKEDSDVDIEVEEGAGDEEYLSLLSERLPSLVDHVRPDLIFYQGGVDPLEHDRLGRLSLTREGLRLRNRLVYDTALARGIPTVLTMGGGYPKDLDPASEDFGHIVRSHRDVYEDAA 333
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: A0A7S1U809_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U809_9STRA) HSP 1 Score: 360 bits (924), Expect = 5.580e-120 Identity = 193/346 (55.78%), Postives = 233/346 (67.34%), Query Frame = 1 Query: 1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQ-RCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAAHSLAQQGAALVR 1035 DVYE PLP HRFPM KYR+VR +Q L LA F VSPLAS +DL+TTHCP YV R LTG LTP E+R +GFPWSE V+R +SS GGTVAAA AV R FAG VAGGTHHAFYD GEGFCVFSDIAVAAN ALR+HA +R++L++DLDVHQGNGNA LFA + AV+T+S C+ N FS R+ SD+DV V + AGDDAYL ++ + +P + ++VRP LVF+QAGVD L DRLG L L+REGL +RN +VY L + TRLVVT+GGGYP+D++ S +H IV AHADVY QA+ LA+ A R Sbjct: 63 DVYEFPLPEGHRFPMEKYRLVRRKLQHTLVPGG-----------------------LAAFDVSPLASREDLVTTHCPAYVDRFLTGELTPGENRCIGFPWSEAGVDRAVSSTGGTVAAARAVLEDGGPR--------FAGQVAGGTHHAFYDYGEGFCVFSDIAVAANCALREHAAWLRRVLVVDLDVHQGNGNAVLFADDPAVFTYSAQCEQNLFSKREASDVDVWVPSGAGDDAYLGMLRETLPAVFERVRPQLVFFQAGVDGLDADRLGRLGLSREGLRQRNDLVYDLVLGGKDTRLVVTLGGGYPKDLSTSSRPFHDIVDAHADVYVQASQRLARSSMAAAR 377
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: F0YDD4_AURAN (Uncharacterized protein HDA n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YDD4_AURAN) HSP 1 Score: 342 bits (876), Expect = 2.180e-113 Identity = 189/338 (55.92%), Postives = 228/338 (67.46%), Query Frame = 1 Query: 1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAAHSLAQ 1014 DV+E PLP HRFPM KYR+VRE +QAE + A F SPLAS DL TTHC Y R + G LT E+RN+GFPWS VNR LSS GGTVAAA AV AR AG + AGHVAGGTHHAF+DRGEGFCVFSDIAVAANV LRD+ ++V KIL++D+DVHQGNGNA LF G AV TFSMHC NYFS ++ SD+DVEV A AGD YL L++ +V ++L D+VF QAGVDP DRLG L+LT +GL RRN+++ A L++ +VVTMGGGYP+++ S +Y AIV AHADVYR+AA + A+ Sbjct: 27 DVWEFPLPENHRFPMAKYRLVREALQAE--------------------------GVAAAFEPSPLASLTDLTTTHCRGYCERFVGGKLTAAENRNIGFPWSPAGVNRALSSTGGTVAAARAVAD---ARRAGGGLRV-AGHVAGGTHHAFFDRGEGFCVFSDIAVAANVLLRDYGDVVEKILVVDVDVHQGNGNAKLFEGAPAVTTFSMHCDGNYFSEKRASDVDVEVPAGAGDGEYLRLLKSYV-QMLAGGGADVVFLQAGVDPSEHDRLGKLRLTADGLRRRNKLLLDAFLRKGASVVVTMGGGYPKNLDPASPEYRAIVEAHADVYREAAAASAR 333
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: A0A7S1IVC4_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IVC4_9EUGL) HSP 1 Score: 338 bits (867), Expect = 5.190e-112 Identity = 180/337 (53.41%), Postives = 217/337 (64.39%), Query Frame = 1 Query: 1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAAHSLA 1011 DVY+VPLP HRFPM KYRMVRE +Q L A F VSPLA+ DL H YV R TG T E+R VGFPWS VNR+LSS+GGTVAA H VCT A FA H+AGGTHHAF D GEGFC+FSDIAVAA VALRD+ ++++KILI+DLDVHQGNGNA LF D V+TFSMHCK NYFS +Q SD+D+E+ D YL++++ + +L D+V+PDLVF+QAGVD + D+LG + LTR GL RRNR VY A+ R +V+TMGGGYPRD+ S + IV HADVY A +LA Sbjct: 28 DVYKVPLPQGHRFPMEKYRMVRERLQCLLPQGE------------------------ALFEVSPLATTRDLCLVHDHTYVNRYRTGAFTDAENRKVGFPWSINSVNRSLSSVGGTVAATHMVCTGKA---------FFAAHLAGGTHHAFRDHGEGFCIFSDIAVAATVALRDYPKIIKKILIVDLDVHQGNGNAVLFKNEDRVFTFSMHCKQNYFSQKQTSDLDIELPKGCTDQEYLAVLQMHLARLFDRVQPDLVFFQAGVDVFYQDKLGKMLLTRGGLLRRNRHVYETAIFRQVPVVITMGGGYPRDVDPASTAFREIVEVHADVYVGAVEALA 331
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: A0A7S4B912_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B912_CHRCT) HSP 1 Score: 336 bits (861), Expect = 7.640e-111 Identity = 182/330 (55.15%), Postives = 216/330 (65.45%), Query Frame = 1 Query: 1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYR 990 D+YEVPLP HRFPM KYR+VR +Q EL S+ LATF SPLA+ DL T H YV R +TG TP+E+R VGFPWS V R+LSS GGTVAA HAVC R GAP FAGH+AGGTHHAF DRGEGFCVF+DIAVAA VALRD+ E V+++LI+DLDVHQGNG AA+FA N V+TFSMHC NYFS +Q SD+DVEV A D YL ++ + L +QVRP L F+QAGVDP D G LK++ GL RRNR+VY A + + LV TMGGGYP+D+ S + + AH DVYR Sbjct: 42 DLYEVPLPPGHRFPMAKYRLVRLGLQRELEPSN-----------------------LATFLPSPLAAVSDLTTCHDATYVERYVTGTFTPQENRRVGFPWSIESVKRSLSSTGGTVAATHAVCN----RTPGAP--RFAGHLAGGTHHAFADRGEGFCVFNDIAVAACVALRDYKESVQRVLIVDLDVHQGNGCAAIFADNPNVFTFSMHCAGNYFSKKQNSDIDVEVQPGATDAEYLEILHSHLGNLFEQVRPQLTFFQAGVDPHEADAFGKLKISSAGLKRRNRLVYKEAARHNSLLVATMGGGYPKDLDQESASFFQVCQAHMDVYR 342
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: A0A0M0J8G2_9EUKA (Histone deacetylase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0J8G2_9EUKA) HSP 1 Score: 325 bits (834), Expect = 1.400e-107 Identity = 169/324 (52.16%), Postives = 214/324 (66.05%), Query Frame = 1 Query: 43 MPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAAHSLAQ 1014 M KYR VRE +Q EL + LATF SPL S DL HC YV+R L G LT E R +GFPWS HVNR LSS GGTVAAAHAVC + A +FAGH+AGGTHHAF DRGEG+CVF+DIAVAA VALRDHA V+++L++D DVHQGNG A++FAG++ V+T S HC+AN FSAR+ SD+DV++ GD+AYL ++ +P L ++VRP L F+QAGVD DR+G LKL+ G+ +RN +VY+AA + RLVVTMGGGYP+D+ S +H +V +H D YRQ A + A+ Sbjct: 1 MQKYRYVREALQRELPST------------------------LATFYESPLVSEKDLTLVHCEGYVSRFLGGQLTRDELRRIGFPWSPQHVNRALSSTGGTVAAAHAVCRADATA-------IFAGHIAGGTHHAFADRGEGYCVFNDIAVAAAVALRDHAARVQRVLVVDCDVHQGNGTASIFAGDERVFTASFHCEANLFSAREVSDLDVDLPPGVGDEAYLEALQAHLPGLFERVRPQLCFFQAGVDVHESDRIGKLKLSSAGIKKRNALVYAAAARHGARLVVTMGGGYPKDLDESSVHFHRVVQSHMDCYRQCASAHAR 293
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: A0A7S1D7Q2_CYCTE (Hypothetical protein (Fragment) n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D7Q2_CYCTE) HSP 1 Score: 322 bits (826), Expect = 5.620e-106 Identity = 172/333 (51.65%), Postives = 222/333 (66.67%), Query Frame = 1 Query: 1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKL-LDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQA 996 DVYEV LP HRFPM KYR RE+IQ + + +A +++ VSPLA++D++ITTH PDY+ R +TG+ T +E RNVGFPWSE V R LSS GGTVAAA AVC + +++ HVAGGTHHAF+DRGEGFCVFSDIAVAANV L+ + LV+KILI+DLDVHQGNGNA LF G D V TFS+HC+ANYFS ++ SD+D+E+ A D+ YL+ + W+ ++ L + DLVF+QAGVD L DRLG + +T G+ RRN++V+ + LV+TMGGGYPR E + I+ AHA+VY QA Sbjct: 14 DVYEVILPPHHRFPMDKYRQTRELIQQYMMDAMTTAT---------------TAGVVSDLRVSPLATWDEIITTHSPDYLYRFVTGDQTDEELRNVGFPWSEAGVKRALSSTGGTVAAACAVCDALLQSGDDRTHPVWSAHVAGGTHHAFFDRGEGFCVFSDIAVAANVVLQRYPSLVKKILIVDLDVHQGNGNAVLFQGRDDVITFSIHCEANYFSPKEESDLDIELPAGCTDETYLTTLRHWLKQIELREPNFDLVFFQAGVDILEQDRLGRMSITSTGVERRNQLVFEFCTRNNLPLVITMGGGYPRT----GEPWKPIIEAHANVYTQA 327
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: A0A0G4EU19_VITBC (Hist_deacetyl domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4EU19_VITBC) HSP 1 Score: 322 bits (826), Expect = 6.200e-105 Identity = 175/338 (51.78%), Postives = 218/338 (64.50%), Query Frame = 1 Query: 1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFC--LFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAAL---QRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVYRQAA 999 D++EV LP H+FPM KYR VR +Q L ++ + A+F+ SPLAS +DL TTHCP YV G+L P + R +GFP VNR LSS+GGTVAA VC + + G LFAGH+AGGTHHAF DRGEGFC FSDIAVAANVALRD+A+++ +ILI+DLDVHQGNGNA LF V+T S+HC ANYFS ++ S +D+EV GD AYLSL+ + +P ++ + RPDL+FYQ+GVD L DR G L L+R GL RNR+VY A+ +VVTMGGGYPRD+ S Y +VSAHADVY AA Sbjct: 58 DLFEVTLPPDHKFPMAKYREVRLRLQRLLGRTTNTNTDSRDQGNA----------VWASFAPSPLASIEDLHTTHCPSYVRAFCEGSLDPMQYRRIGFPRGHESVNRALSSVGGTVAATRDVCLALRRQRKGQEPTRPLFAGHIAGGTHHAFRDRGEGFCAFSDIAVAANVALRDYADVIERILIVDLDVHQGNGNAVLFQDQSNVFTLSVHCTANYFSPKEASHVDIEVPEGTGDGAYLSLLAKTLPDIVREFRPDLIFYQSGVDCLKTDRFGKLSLSRGGLQTRNRLVYEMAMTDKHTPVPVVVTMGGGYPRDLEVESRSYQEVVSAHADVYVGAA 385
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Match: A0A1Z5K2H7_FISSO (Hist_deacetyl domain-containing protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K2H7_FISSO) HSP 1 Score: 304 bits (779), Expect = 3.630e-99 Identity = 168/329 (51.06%), Postives = 211/329 (64.13%), Query Frame = 1 Query: 1 DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSXXXXXXXXXXXXXXXXXXXSAPMLATFSVSPLASYDDLITTHCPDYVTRVLTGNLTPKESRNVGFPWSEGHVNRTLSSIGGTVAAAHAVCTSPAARDAGAPFCLFAGHVAGGTHHAFYDRGEGFCVFSDIAVAANVALRDHAELVRKILIIDLDVHQGNGNAALFAGNDAVYTFSMHCKANYFSARQYSDMDVEVDASAGDDAYLSLVEQWVPKLLDQVRPDLVFYQAGVDPLWCDRLGHLKLTREGLSRRNRIVYSAALQRCTRLVVTMGGGYPRDMTAGSEDYHAIVSAHADVY 987 DVYEVPLP HRFPM KY+ VR+++Q +LAGS F VSPLA+ ++L TTH +YV G TP+E RNVGFPWS V R SS+GGTVAAA VC+ P +A H+AGGTHHAFYDRGEGFCVFSD+AVAANV L + +++IL++DLDVHQGNGNA LF + V+TFS+HC ANYFSARQ SD+D+E+ + D+ YL + W+ +L +Q DL+F+QAGVD L DRLG + L+ EG+ RRN +VY A + LV+ MGGGYPR SED+ I+ AHA VY Sbjct: 5 DVYEVPLPPNHRFPMGKYKRVRKLVQHQLAGSENLQ-----------------------FLVSPLATTEELTTTHAFEYVQNFEKGYQTPQELRNVGFPWSPEGVLRAFSSVGGTVAAACHVCSQPN---------RWAAHLAGGTHHAFYDRGEGFCVFSDMAVAANVVLERYPH-IQRILLLDLDVHQGNGNAVLFQNDSQVFTFSLHCSANYFSARQRSDLDIELPPNCSDNTYLVTLRYWLQQL-EQQSYDLIFFQAGVDVLKEDRLGRMDLSLEGVRRRNGLVYEFAQRHQIPLVICMGGGYPR-----SEDWEPILEAHASVY 294 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|161438 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_3351 ID=mRNA_3351|Name=jgi.p|Trimin1|161438|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1044bp|location=Sequence derived from alignment at Contig_17:336921..341812+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. GATGTGTACGAGGTGCCGCTGCCAACAACCCACCGATTCCCAATGCCCAAback to top protein sequence of jgi.p|Trimin1|161438 >Trimin1|161438|e_gw1.17.208.1 ID=Trimin1|161438|e_gw1.17.208.1|Name=jgi.p|Trimin1|161438|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=348bp DVYEVPLPTTHRFPMPKYRMVREMIQAELAGSSSSGSSSSGSSSGGSSSSback to top mRNA from alignment at Contig_17:336921..341812+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_3351 ID=mRNA_3351|Name=jgi.p|Trimin1|161438|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4892bp|location=Sequence derived from alignment at Contig_17:336921..341812+ (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_17:336921..341812+ >mRNA_3351 ID=mRNA_3351|Name=jgi.p|Trimin1|161438|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1044bp|location=Sequence derived from alignment at Contig_17:336921..341812+ (Tribonema minus UTEX_B_3156 )back to top |