Trimin1|153093|gw1.17.226.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|153093
Unique NameTrimin1|153093|gw1.17.226.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length103
Homology
BLAST of jgi.p|Trimin1|153093 vs. uniprot
Match: A0A835Z6I7_9STRA (Ankyrin repeat protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6I7_9STRA)

HSP 1 Score: 200 bits (508), Expect = 5.910e-65
Identity = 103/103 (100.00%), Postives = 103/103 (100.00%), Query Frame = 0
Query:    1 LQDHGLTALHYAVFNGNTLCVEVLCANASGHDANGHHCSCIDMVSTMGCTALHLAAAEASNAAAIIEILLSSGADAAIRDGQGRTAADVAAEKGRHQYAEVLS 103
            LQDHGLTALHYAVFNGNTLCVEVLCANASGHDANGHHCSCIDMVSTMGCTALHLAAAEASNAAAIIEILLSSGADAAIRDGQGRTAADVAAEKGRHQYAEVLS
Sbjct:    1 LQDHGLTALHYAVFNGNTLCVEVLCANASGHDANGHHCSCIDMVSTMGCTALHLAAAEASNAAAIIEILLSSGADAAIRDGQGRTAADVAAEKGRHQYAEVLS 103          
BLAST of jgi.p|Trimin1|153093 vs. uniprot
Match: D7FUI1_ECTSI (Ankyrin repeat protein E2_17 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUI1_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.870e-21
Identity = 50/103 (48.54%), Postives = 65/103 (63.11%), Query Frame = 0
Query:    1 LQDHGLTALHYAVFNGNTLCVEVLCANASGHDANGHHCSCIDMVSTMGCTALHLAAAEASNAAAIIEILLSSGADAAIRDGQGRTAADVAAEKGRHQYAEVLS 103
            + D GL+ALHYA +NG+  CVE+LC N  GHD  G   SCID+ S  G T LHLAA++  N    I+ LL +GAD +IRD  G+TA + A + GR   A  L+
Sbjct:    1 MDDFGLSALHYASWNGHVRCVEILCINDLGHDGAGLQRSCIDLRSIKGWTPLHLAASDGVNGMKCIDALLRAGADRSIRDVDGKTALEAAIDAGRDDCARALN 103          
BLAST of jgi.p|Trimin1|153093 vs. uniprot
Match: A0A7S4VTH5_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4VTH5_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.370e-8
Identity = 48/130 (36.92%), Postives = 65/130 (50.00%), Query Frame = 0
Query:    1 LQDHGLTALHYAVFNGNTLCVEVLCANASG-HDANGHHCSCIDMVSTMGCTALHLAAAEASNAAAIIE-------------------------ILLSSGADA-AIRDGQGRTAADVAAEKGRHQYAEVLS 103
            + + GLTALHYAV+NG+  CVE+L AN  G H   G  CS I++ S  G TALH+ A      AA++E                         +LL  GAD  A+RD +G++A D+A E G      V +
Sbjct:   31 VDEKGLTALHYAVWNGHLQCVEILVANHWGKHHETGDVCSSINLQSKTGYTALHIVA---MRMAALLEDESYDANENSDERQTKESENIECCRLLLMVGADCIALRDIEGKSAIDLAREAGNESLVSVFN 157          
BLAST of jgi.p|Trimin1|153093 vs. uniprot
Match: A0A482S1M6_9ARCH (Ankyrin repeat protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S1M6_9ARCH)

HSP 1 Score: 53.1 bits (126), Expect = 5.520e-7
Identity = 24/53 (45.28%), Postives = 36/53 (67.92%), Query Frame = 0
Query:    1 LQDHGLTALHYAVFNGNTLCVEVLCANASGHDANGHHCSCIDMVSTMGCTALH 53
            + + GLTALHYAV+NG+  CV++L  N+ G D+ G   +C++M S +G T  H
Sbjct:   31 IDEWGLTALHYAVWNGHVECVKLLVFNSHGVDSKGQKTTCLNMKSCIGLTGTH 83          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|153093 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835Z6I7_9STRA5.910e-65100.00Ankyrin repeat protein (Fragment) n=1 Tax=Tribonem... [more]
D7FUI1_ECTSI1.870e-2148.54Ankyrin repeat protein E2_17 n=2 Tax=Ectocarpus Ta... [more]
A0A7S4VTH5_9STRA1.370e-836.92Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A482S1M6_9ARCH5.520e-745.28Ankyrin repeat protein n=1 Tax=archaeon TaxID=1906... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 65..79
score: 36.31
coord: 5..20
score: 39.41
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 47..78
e-value: 0.017
score: 24.3
coord: 4..33
e-value: 0.51
score: 19.4
IPR002110Ankyrin repeatPFAMPF00023Ankcoord: 4..25
e-value: 6.3E-4
score: 20.1
coord: 47..80
e-value: 1.2E-5
score: 25.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 47..81
score: 11.78128
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..103
e-value: 3.0E-21
score: 77.7
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 4..102
NoneNo IPR availablePANTHERPTHR24180CYCLIN-DEPENDENT KINASE INHIBITOR 2C-RELATEDcoord: 4..102
NoneNo IPR availablePANTHERPTHR24180:SF15CYCLIN-DEPENDENT KINASE INHIBITOR 2Ccoord: 4..102
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 47..80
score: 10.577295

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_17contigContig_17:380229..380537 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|153093mRNA_3359Tribonema minus UTEX_B_3156 mRNAContig_17 380229..380537 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|153093|gw1.17.226.1 ID=Trimin1|153093|gw1.17.226.1|Name=jgi.p|Trimin1|153093|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=103bp
LQDHGLTALHYAVFNGNTLCVEVLCANASGHDANGHHCSCIDMVSTMGCT
ALHLAAAEASNAAAIIEILLSSGADAAIRDGQGRTAADVAAEKGRHQYAE
VLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf