mRNA_17023 (mRNA) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|353549 vs. uniprot
Match: A0A835ZAZ9_9STRA (PCI domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAZ9_9STRA) HSP 1 Score: 815 bits (2105), Expect = 4.020e-296 Identity = 449/449 (100.00%), Postives = 449/449 (100.00%), Query Frame = 1
Query: 22 MSDRLEERKDFTEDLKVKVPEATRLTEGGKLNEALDLLMTLERNCRVGNDXXXXXXXXXXXXXXXXXXXXXXXXNATATLLAKRRGQQGRTITAMVQECMLWLDETPDKATKIALIVALRDITDGKIFVEGERARLTRLLADIKEKDGDVAGAQEVLQEVAVETYGALDKKEKTDFILEQVRLTLLKKDYVRALIQSRKINRKIIEGDDMQELKVRFYRLMLDYDLHEKDPFSLCCDYHAIFATAIIKADAQQRQAALKSCVVYLVLSPYTNTQQDMLHRVSRYPELDELTSYKTLLKLFTTYEIIDYPLPFAAELEAHIKESIAATGTDPELGPPLLEQWLKDLHTRVVQHNIRVAAKYYKQIRTARLATLLGLDEGTTERSLSTMVSDGTLYARINRPEGIISFSKPQPSEEVLSSWNSDLSSLLRLLEHTTHLINKETMLAGNVKA 1368
MSDRLEERKDFTEDLKVKVPEATRLTEGGKLNEALDLLMTLERNCRVGNDXXXXXXXXXXXXXXXXXXXXXXXXNATATLLAKRRGQQGRTITAMVQECMLWLDETPDKATKIALIVALRDITDGKIFVEGERARLTRLLADIKEKDGDVAGAQEVLQEVAVETYGALDKKEKTDFILEQVRLTLLKKDYVRALIQSRKINRKIIEGDDMQELKVRFYRLMLDYDLHEKDPFSLCCDYHAIFATAIIKADAQQRQAALKSCVVYLVLSPYTNTQQDMLHRVSRYPELDELTSYKTLLKLFTTYEIIDYPLPFAAELEAHIKESIAATGTDPELGPPLLEQWLKDLHTRVVQHNIRVAAKYYKQIRTARLATLLGLDEGTTERSLSTMVSDGTLYARINRPEGIISFSKPQPSEEVLSSWNSDLSSLLRLLEHTTHLINKETMLAGNVKA
Sbjct: 1 MSDRLEERKDFTEDLKVKVPEATRLTEGGKLNEALDLLMTLERNCRVGNDXXXXXXXXXXXXXXXXXXXXXXXXNATATLLAKRRGQQGRTITAMVQECMLWLDETPDKATKIALIVALRDITDGKIFVEGERARLTRLLADIKEKDGDVAGAQEVLQEVAVETYGALDKKEKTDFILEQVRLTLLKKDYVRALIQSRKINRKIIEGDDMQELKVRFYRLMLDYDLHEKDPFSLCCDYHAIFATAIIKADAQQRQAALKSCVVYLVLSPYTNTQQDMLHRVSRYPELDELTSYKTLLKLFTTYEIIDYPLPFAAELEAHIKESIAATGTDPELGPPLLEQWLKDLHTRVVQHNIRVAAKYYKQIRTARLATLLGLDEGTTERSLSTMVSDGTLYARINRPEGIISFSKPQPSEEVLSSWNSDLSSLLRLLEHTTHLINKETMLAGNVKA 449
BLAST of jgi.p|Trimin1|353549 vs. uniprot
Match: D8LEC4_ECTSI (PCI domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LEC4_ECTSI) HSP 1 Score: 490 bits (1261), Expect = 6.170e-168 Identity = 269/445 (60.45%), Postives = 336/445 (75.51%), Query Frame = 1
Query: 22 MSDRLEERKDFTEDLKVKVPEATRLTEGGKLNEALDLLMTLERNCRVGNDXXXXXXXXXXXXXXXXXXXXXXXXNATATLLAKRRGQQGRTITAMVQECMLWLDETPDKATKIALIVALRDITDGKIFVEGERARLTRLLADIKEKDGDVAGAQEVLQEVAVETYGALDKKEKTDFILEQVRLTLLKKDYVRALIQSRKINRKIIEGDDMQELKVRFYRLMLDYDLHEKDPFSLCCDYHAIFATAIIK-ADAQQRQAALKSCVVYLVLSPYTNTQQDMLHRVSRYPELDELTSYKTLLKLFTTYEIIDYPLPFAAELEAHIKESIAATGTDPELGPPLLEQWLKDLHTRVVQHNIRVAAKYYKQIRTARLATLLGLDEGTTERSLSTMVSDGTL-YARINRPEGIISFSKPQPSEEVLSSWNSDLSSLLRLLEHTTHLINKETML 1350
M DRLEERKDFT ++ K+PEA +L EGGKL + LD++M+LER CRVGND XXXXXXXXX N T TL++KRRGQ + +TAMVQE + WLDETPDK T++ L+VALRDITDGKI+VE ERA+LTR+LA IKE+DGDVAGA EVLQEV VETYGAL KKEK DFILEQ+RLTL KKD+VRALIQSRKINRK++ +DMQ++KVRFY+LM++YD HEK F LC D+H+I+ T ++ + ++ + L++ V++LVLSP N QQDML RV+ Y +L+EL +YK L+KLFTT EII YP+ LE+ + A G GP LL +W +DL R+VQHNIR A YYKQI T RLA LLGLDE ER ++ MVSDG+L YA+I+RP+GII+F K +PSEE+LS WNSD+ LL+L+E + HLINKE ML
Sbjct: 1 MGDRLEERKDFTAEVTAKLPEAKKLAEGGKLADGLDIIMSLERLCRVGNDFPNLKEVIXXXXXXXXXVEDWAQLNTTLTLISKRRGQHSKAVTAMVQEAVGWLDETPDKDTRVLLLVALRDITDGKIYVEAERAKLTRMLAKIKEEDGDVAGAAEVLQEVHVETYGALTKKEKADFILEQIRLTLAKKDFVRALIQSRKINRKVLLDEDMQDIKVRFYKLMIEYDTHEKATFDLCQDFHSIYDTPSVRDKEGEEWKQYLQAAVLFLVLSPNGNHQQDMLFRVAEYKKLEELPAYKMLVKLFTTPEIIGYPVENQEALES---DPCLAAG-----GPELLAKWKEDLKLRIVQHNIRTVASYYKQINTKRLADLLGLDENQAERKVADMVSDGSLAYAKIDRPKGIINFDKRKPSEEILSEWNSDIGQLLQLVERSCHLINKENML 437
BLAST of jgi.p|Trimin1|353549 vs. uniprot
Match: A0A7S2V6L0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V6L0_9STRA) HSP 1 Score: 424 bits (1089), Expect = 1.340e-141 Identity = 235/459 (51.20%), Postives = 305/459 (66.45%), Query Frame = 1
Query: 34 LEERKDFTEDLKVKVPEATRLTEGGKLNEALDLLMTLERNCRVGNDXXXXXXXXXXXXXXXXXXXXXXXXNATATLLAKRRGQQGRTITAMVQECMLWLDETPDKATKIALIVALRDITDGKIFVEGERARLTRLLADIKEKDGDVAGAQEVLQEVAVETYGALDKKEKTDFILEQVRLTLLKKDYVRALIQSRKINRKIIEGDDMQELKVRFYRLMLDYDLHEKDPFSLCCDYHAIFATAIIKADAQQRQAALKSCVVYLVLSPYTNTQQDMLHRVSRYPELDELTSYKTLLKLFTTYEIIDYPLPFAAELEAHIKESIAATGTDPELGPPLLEQWLKDLHTRVVQHNIRVAAKYYKQIRTARLATLLGLDEGTTERSLSTMVSDGT--------------------LYARINRPEGIISFSKPQPSEEVLSSWNSDLSSLLRLLEHTTHLINKETML 1350
LE +KDFT+++ K+P A +L+EGG+L EALD L +E+ CR+GND NAT TL++KRR Q + + MVQE M W++ETP K+AL+ LRDITDGKIF+E ERARLTR LA + E G V A +VLQEV VETYG+LDK+EK +FILEQ+RLTL KKDYVRALIQSRKI+RK++E +DMQ++K+ FYRLM++Y +E+DP LC YH+I T + D Q + AL++ V++LVLSP TNTQQD+L +V+ L++L ++K L +FTT ++I YPL +LEAH + A P L ++W + L TR VQH+IRV +KYYK+IR RLA LLGLD TE LSTMVS G+ LYARI+RP GI+SFSK QP EE+LS+WN+D+S LL L+E T HLINKE ML
Sbjct: 3 LEIKKDFTKEVSEKLPIAIKLSEGGQLTEALDSLAGVEKKCRLGNDTKNLKEIILTMVKMCRKCEDWEQLNATLTLVSKRRSQSTKAVLGMVQEAMGWIEETPTPEAKLALLNTLRDITDGKIFLEAERARLTRQLAALHEAAGRVDQAADVLQEVHVETYGSLDKREKAEFILEQIRLTLAKKDYVRALIQSRKISRKVLEEEDMQDIKINFYRLMIEYHTYEEDPLELCRHYHSILHTPKVAEDDAQWKEALEATVLFLVLSPQTNTQQDLLQKVALDTRLEKLPNFKNLTTVFTTQQVIGYPLQGQQDLEAHPCLARHAP-------PTLPQKWAQQLRTRTVQHSIRVVSKYYKRIRMQRLAELLGLDVPQTESHLSTMVSAGSELVTPTGPSEKDVSAGEGSALYARIDRPAGIVSFSKHQPPEEILSAWNADISELLGLVEKTCHLINKENML 454
BLAST of jgi.p|Trimin1|353549 vs. uniprot
Match: A0A7S2RAT1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RAT1_9STRA) HSP 1 Score: 396 bits (1017), Expect = 1.410e-130 Identity = 213/443 (48.08%), Postives = 294/443 (66.37%), Query Frame = 1
Query: 34 LEERKDFTEDLKVKVPEATRLTEGGKLNEALDLLMTLERNCRVGNDXXXXXXXXXXXXXXXXXXXXXXXXNATATLLAKRRGQQGRTITAMVQECMLWLDETPDKATKIALIVALRDITDGKIFVEGERARLTRLLADIKEKDGDVAGAQEVLQEVAVETYGALDKKEKTDFILEQVRLTLLKKDYVRALIQSRKINRKIIEGDDMQELKVRFYRLMLDYDLHEKDPFSLCCDYHAIFATAIIKADAQQRQAA----LKSCVVYLVLSPYTNTQQDMLHRVSRYPELDELTSYKTLLKLFTTYEIIDYPLPFAAELEAHIKESIAATGTDPELGPPLLEQWLKDLHTRVVQHNIRVAAKYYKQIRTARLATLLGLDEGTTERSLSTMVSDGTLYARINRPEGIISFSKPQPSEEVLSSWNSDLSSLLRLLEHTTHLINKETML 1350
+E+++D++E VPEAT L++ G+L++A+D+L++LE+ CR+GND N+ +AKR Q + A+V CM W+D TPDKATK+ L+VALR++TDGKI+VE ERAR+TR LA+IKE DGD+AGA +VL +V VETYGAL K+EK DFILEQ+R+T+ K+D+VR LI ++K+ +KII+ D+Q+LK+R++RLM +Y LHEKD F L +++++ T I D + LKSC+++L L+P TN Q DMLHR++ +L++L + ++KLFTT EII +PLP +E +KE GT PEL P W + H R QHN+RV AKYYK+IR RLA LLGL E+ LS +VS G LYA+I+RP GI SF +EE LS W+SD+ LL L+E T HLINKE ML
Sbjct: 37 IEKKEDYSELAGTLVPEATLLSQNGELSKAVDMLLSLEKKCRLGNDVSTLKLTVTTICELCRGQGDWAKLNSALGTIAKRHQQSKYAVMAVVNLCMGWIDTTPDKATKVDLLVALREVTDGKIYVEAERARITRQLAEIKEADGDIAGACDVLLDVYVETYGALSKREKVDFILEQIRMTIAKQDWVRVLIVAKKVQKKIIDEPDLQDLKMRYHRLMTEYYLHEKDAFELAQSFYSLYDTPCIAEDDSDLVSGWKHHLKSCILFLCLAPQTNHQADMLHRIAAIEKLEQLDEWHGVVKLFTTDEIITFPLPQQPVVEQLLKE----VGT-PELFP----YWQQQTHERTTQHNMRVVAKYYKRIRMVRLAELLGLTVDEAEKQLSALVSQGALYAKIDRPAGIASFKSRATAEETLSEWSSDIGQLLSLVERTCHLINKENML 470
BLAST of jgi.p|Trimin1|353549 vs. uniprot
Match: A0A4D9CRV0_9STRA (PCI domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CRV0_9STRA) HSP 1 Score: 388 bits (996), Expect = 8.630e-128 Identity = 214/450 (47.56%), Postives = 299/450 (66.44%), Query Frame = 1
Query: 22 MSDRLEERKDFTEDLKVKVPEATRLTEGGKLNEALDLLMTLERNCRVGNDXXXXXXXXXXXXXXXXXXXXXXXXNATATLLAKRRGQQGRTITAMVQECM--LWLDETPDKATKIALIVALRDITDGKIFVEGERARLTRLLADIKEKDGDVAGAQEVLQEVAVETYGALDKKEKTDFILEQVRLTLLKKDYVRALIQSRKINRKIIEGDD--MQELKVRFYRLMLDY-DLHEKDPFSLCCDYHAIFATAIIKADAQQRQAALKSCVVYLVLSPYTNTQQDMLHRVSRYPE--LDELTSYKTLLKLFTTYEIIDYPLPFAAELEAHIKESIAATGTDPELGPPLLEQWLKDLHTRVVQHNIRVAAKYYKQIRTARLATLLGLDEGTTERSLSTMVSDGTLYARINRPEGIISFSKPQPSEEVLSSWNSDLSSLLRLLEHTTHLINKETML 1350
M +L E+KD + + +PEA L + GKL EA++LL+ +E+ R+GND N T T L+KRR Q I+AMVQE M +LD TPD +K LIV LRDITDGKIFVE ERARLTR L+ + E +G VA A +++Q+V VETYG+LDK+EK +FILEQ+RLTL KKD++R I ++K+ +K++EG+D +Q LK++FYRLM++Y L EK+ F + YH+I+ T +++A+ + +AAL +CV++L+++P++N Q DMLHR+ R E L +L YK +LK +TT EII YPLP ++E+H ++ G L + WL+ L TRV+QHNIRV + YYK+IR R A LL LD E +++T+VS+G LYARI+RP +SFS + +EE LS W +D+S LLRL+E TTHLINKE ML
Sbjct: 1 MDGQLIEKKDCSAAVAAALPEAKSLADAGKLAEAVELLLGVEKQARMGNDVTSLKEVVLATIRLVREKKDWEQMNTTLTQLSKRRSQNKAAISAMVQEAMGPSYLDATPDAESKRKLIVTLRDITDGKIFVETERARLTRTLSHLLEAEGKVAEACDIIQDVHVETYGSLDKQEKLEFILEQIRLTLAKKDFIRTYIIAKKVTKKLLEGEDPALQALKLKFYRLMIEYHSLAEKEAFEIAQHYHSIYNTPVVRAEESEWRAALSACVLFLIIAPHSNQQSDMLHRLVRQEEDQLAQLPVYKEILKTYTTREIIRYPLPQLPDIESHPALTL--------YGHELAQHWLQQLRTRVIQHNIRVLSAYYKKIRLTRAADLLSLDVSELENNIATLVSEGALYARIDRPANQVSFSPTKIAEETLSDWAADISELLRLVERTTHLINKEQML 442
BLAST of jgi.p|Trimin1|353549 vs. uniprot
Match: A0A7S1ZZ80_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZZ80_TRICV) HSP 1 Score: 370 bits (951), Expect = 1.490e-120 Identity = 213/452 (47.12%), Postives = 286/452 (63.27%), Query Frame = 1
Query: 31 RLEERKDFTEDLKVKVPEATRLTEGG--KLNEALDLLMTLERNCRVGNDXXXXXXXXXXXXXXXXXXXXXXXXNATATLLAKRRGQQGRTITAMVQECMLWLDE----TP-------DKATKIALIVALRDITDGKIFVEGERARLTRLLADIKEKDGDVAGAQEVLQEVAVETYGALDKKEKTDFILEQVRLTLLKKDYVRALIQSRKINRKIIEGDDMQELKVRFYRLMLDYDLHEKDPFSLCCDYHAIFATAIIKADAQQRQAALKSCVVYLVLSPYTNTQQDMLHRVSRYPELDELTSYKTLLKLFTTYEIIDYPLPFAAELEAHIKESIAATGTDPELGPPLLEQWLKDLHTRVVQHNIRVAAKYYKQIRTARLATLLGLDEGTTERSLSTMVSDGTLYARINRPEGIISFSKPQPSEEVLSSWNSDLSSLLRLLEHTTHLINKETM 1347
+LEER D + ++ K+ +A L G L EAL LL LE+ CRVGND A LA RR Q+ + ++A+VQ+ + W+ + TP KA + L+VAL +ITDGKIF+E ERARLTR LA IKE+DGD+A A EVLQ+V VETYG+L K+EK +FILEQ+RLTL KKDY+RA I + KINRK + + M+ K++F+ LM +Y HEKD L DYH+I++T+ ++A+ + AL+S V++L LS Y+N QQDML+R++ P L+++ S K +KL EII YPLP AELEA ++ GP L W K HTR+VQHN+RVAA YY++I RLA LLGL+ E +S MVSDG++YA+I+RP II FS+ + E +LS W SD+SSLL L+E TTHLI+KE M
Sbjct: 34 QLEERADLSAEVDTKLEQARSLVAAGPENLREALALLAALEKRCRVGNDTPSLVRVCEESLQLCKDCNDDEALVAALKNLATRRSQKTKAVSALVQKAIPWVLQGDGFTPLPVQNEEQKAIREKLVVALMEITDGKIFLEAERARLTRALATIKEEDGDIAAAAEVLQDVHVETYGSLSKREKVEFILEQMRLTLGKKDYIRAAIVAGKINRKAVSEEGMEGEKIKFFTLMTEYHRHEKDAIELAKDYHSIYSTSSVQANEADWKDALQSTVLFLALSQYSNEQQDMLNRINLDPNLEKIESCKETVKLLLKKEIIHYPLPHQAELEAMPSFTVG--------GPDLTAHWHKIFHTRIVQHNVRVAALYYRRIHGRRLAQLLGLEPAELEAEISNMVSDGSVYAKIDRPNDIIRFSQKKTPEAILSDWASDISSLLHLVESTTHLIHKEQM 477
BLAST of jgi.p|Trimin1|353549 vs. uniprot
Match: A0A6V2BEV7_9STRA (Hypothetical protein n=3 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6V2BEV7_9STRA) HSP 1 Score: 363 bits (931), Expect = 7.610e-118 Identity = 209/452 (46.24%), Postives = 285/452 (63.05%), Query Frame = 1
Query: 31 RLEERKDFTEDLKVKVPEATRLTEGG--KLNEALDLLMTLERNCRVGNDXXXXXXXXXXXXXXXXXXXXXXXXNATATLLAKRRGQQGRTITAMVQECMLW---------LDETPDKATKIA--LIVALRDITDGKIFVEGERARLTRLLADIKEKDGDVAGAQEVLQEVAVETYGALDKKEKTDFILEQVRLTLLKKDYVRALIQSRKINRKIIEGDDMQELKVRFYRLMLDYDLHEKDPFSLCCDYHAIFATAIIKADAQQRQAALKSCVVYLVLSPYTNTQQDMLHRVSRYPELDELTSYKTLLKLFTTYEIIDYPLPFAAELEAHIKESIAATGTDPELGPPLLEQWLKDLHTRVVQHNIRVAAKYYKQIRTARLATLLGLDEGTTERSLSTMVSDGTLYARINRPEGIISFSKPQPSEEVLSSWNSDLSSLLRLLEHTTHLINKETM 1347
+LE+R D + + K+ +A +L E L EAL LL LE+ CRVGND AT L+ RR Q+ + ++A+V + + W LD + D+ I L+V LRDITDGKIF+E ERARLTR LA IKE++GD+A A VLQ+V VETYG+L K+EK +FILEQ+RLTL K+DY+RA I + KINRK I + M++ K++F+ LM +Y HEKD F L DYH+I++T+ ++AD Q + AL+S V++L LSPY+N QQDM++R+ P L+++ S + LKL EII++PLP ELE+ +I G L W K HTR+VQHN+RVAA YY++I RLA LLGL E +++MVSDG++YA+I+RP II F+ + E VLS W SD+SSLL L+E TTHLI+KE M
Sbjct: 12 QLEDRVDLSAETDSKLLQAQQLVEASTDNLREALALLAALEKRCRVGNDTTSLVKVCEASLQLCKDASDDEALVATLKNLSTRRSQKSKAVSALVHKAITWVLEGDGYSPLDVSTDEQRVIRERLVVTLRDITDGKIFLEAERARLTRALATIKEEEGDIAAAANVLQDVHVETYGSLSKREKVEFILEQMRLTLGKQDYIRAAIVAGKINRKAIAEEGMEQEKIKFFTLMTEYHRHEKDAFELAKDYHSIYSTSSVQADENQWRDALQSSVLFLALSPYSNEQQDMMNRIYIDPNLEKIDSCRETLKLLLRKEIINFPLPHQTELESMGAFTIG--------GDELTSHWRKTFHTRIVQHNVRVAALYYRRIHGKRLAQLLGLKPAELEAEIASMVSDGSVYAKIDRPGDIIRFAAKKTPEAVLSDWASDISSLLDLVESTTHLIHKENM 455
BLAST of jgi.p|Trimin1|353549 vs. uniprot
Match: A0A7S2GQN4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GQN4_9STRA) HSP 1 Score: 363 bits (932), Expect = 9.200e-118 Identity = 207/445 (46.52%), Postives = 279/445 (62.70%), Query Frame = 1
Query: 34 LEERKDFTEDLKVKVPEATRLTEGGKLNEALDLLMTLERNCRVGNDXXXXXXXXXXXXXXXXXXXXXXXXNATATLLAKRRGQQGRTITAMVQECMLWLDETPDKATKIALIVALRDITDGKIFVEGERARLTRLLADIKEKDGDVAGAQEVLQEVAVETYGALDKKEKTDFILEQVRLTLLKKDYVRALIQSRKINRKIIEGDDMQELKVRFYRLMLDYDLHEKDPFSLCCDYHAIFATAIIKADAQQRQA---ALKSCVVYLVLSPYTNTQQDMLHRVSRYPELDE---LTSYKTLLKLFTTYEIIDYPLPFAAELEAHIKESIAATGTDPELGPPLLEQWLKDLHTRVVQHNIRVAAKYYKQIRTARLATLLGLDEGTTERSLSTMVSDGTLYARINRPEGIISFSKPQPSEEVLSSWNSDLSSLLRLLEHTTHLINKETML 1350
+E+ +DFTE K ++ EA L + G+L +A++LL++LE+ CR+G D NAT +++KR Q I+A+V + WLDETPDK TK+ L+ L ++T GKI+VEGERA LTR LA IKE DGDV GA + EV VETYGAL+K+EK DFILEQ+RL +LKKD VRA I S+K++RK ++ ++ Q+LK+RFY+LM++Y EKD F L D+H+I+ T + D + LKSC+ +L+LS ++ Q DMLHR++ +L E L ++ +K FTT EII +PL LE ++ ++ + E K H R QHNIRVAAK YK+IRT RLA LLGL E LS +V+DG L ARINRP IISF KP EE LS+W SD++SLL +EHT HLINKE M+
Sbjct: 35 IEKTEDFTELAKTQIAEAQLLVDNGELQKAIELLLSLEKKCRLGLDIANLKQTVTAMTLLCRKTGDWDKLNATLLVISKRHQQSKHAISAVVAQGSSWLDETPDKETKVKLLKTLLEVTVGKIYVEGERATLTRQLAAIKEADGDVDGACAAMLEVYVETYGALNKREKIDFILEQIRLCILKKDMVRAYIVSKKVSRKSLDDNEHQDLKLRFYKLMIEYHTAEKDAFELAQDFHSIYQTPCVLEDDGEGTGWRYQLKSCIAFLILSAHSPGQSDMLHRMAADVKLQEDASLGEWRNTVKAFTTPEIIAFPLEDQQALEDQLRSAVP--------NAEIWEHMRKMSHERTTQHNIRVAAKNYKRIRTTRLAELLGLTTDEIETQLSRLVADGMLMARINRPANIISFKKPVSHEETLSAWASDIASLLTHVEHTCHLINKENMI 471
BLAST of jgi.p|Trimin1|353549 vs. uniprot
Match: A0A7S2S703_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S703_9STRA) HSP 1 Score: 359 bits (921), Expect = 2.670e-116 Identity = 204/454 (44.93%), Postives = 289/454 (63.66%), Query Frame = 1
Query: 31 RLEERKDFTEDLKVKVPEATRLTEGGKLN--EALDLLMTLERNCRVGNDXXXXXXXXXXXXXXXXXXXXXXXXNATATLLAKRRGQQGRTITAMVQECMLWL-----------DETPDKATKIALIVALRDITDGKIFVEGERARLTRLLADIKEKDGDVAGAQEVLQEVAVETYGALDKKEKTDFILEQVRLTLLKKDYVRALIQSRKINRKIIEGDDMQELKVRFYRLMLDYDLHEKDPFSLCCDYHAIFATAIIKADAQQRQAALKSCVVYLVLSPYTNTQQDMLHRVSRYPELDELTSYKTLLKLFTTYEIIDYPLPFAAELEAHIKESIAATGTDPELGPPLLEQWLKDLHTRVVQHNIRVAAKYYKQIRTARLATLLGLDEGTTERSLSTMVSDGTLYARINRPEGIISFSKPQPSEEVLSSWNSDLSSLLRLLEHTTHLINKETMLA 1353
+LEER D +++ K+ +A L E + N EAL LL LE+ CR+GND +T LA RR Q+ + ++A+V++ + W+ KA + L+VALRDITDGKIF+E ERARLTR LA IKE+DGD+ GA +VLQEV VETYG+L K+EK +FILEQ+RLTL KKDYVR I S KINRK I + M++ K++++ LM +Y HE++ + L DYH I+ T+ ++A+ ++ + AL+ VV+L LSPY+ QQDML+R++ P L+++ + K +KLF E I YP+P+ +ELE S++ D E+ L+ W K TR++QHN+RVA+ YY++I RLA LLGL ER ++ MVS+G +YA+I+RP II F++ + E VLS W SD+SSLL L+E TTHLINKE M++
Sbjct: 14 QLEERVDLSKETDEKIAQARSLIETSQSNLREALALLAALEKRCRIGNDSPSLVSVCEASLQLCKDCSDEEALISTLKNLATRRSQKTKAVSALVEKAIPWVLKGKGFEPLDVSNEEQKAIREKLVVALRDITDGKIFLERERARLTRALAIIKEQDGDIPGASDVLQEVHVETYGSLSKREKIEFILEQMRLTLGKKDYVRTAIVSGKINRKAIAEEGMEQEKIQYFTLMTEYHKHERNSYELAKDYHQIYQTSTVQANEEKWREALQCTVVFLSLSPYSMEQQDMLNRINIDPNLEKIIACKDTVKLFLKKEFIKYPMPYQSELE-----SLSVFHADGEV---LMAHWKKTFRTRIIQHNVRVASLYYRRIHGKRLAQLLGLSPDELEREIANMVSNGDVYAKIDRPCDIIRFAQKKTPEAVLSDWASDVSSLLNLVESTTHLINKENMMS 459
BLAST of jgi.p|Trimin1|353549 vs. uniprot
Match: A0A7S1UA35_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UA35_9STRA) HSP 1 Score: 359 bits (922), Expect = 4.980e-116 Identity = 208/456 (45.61%), Postives = 285/456 (62.50%), Query Frame = 1
Query: 31 RLEERKDFTEDLKVKVPEATRLTEGGKLNEALDLLMTLERNCRVGNDXXXXXXXXXXXXXXXXXXXXXXXXNATATLLAKRRGQQGRTITAMVQECMLWLDETPDKATKIA-LIVALRDITDGKIFVEGERARLTRLLADIKEKDGDVAGAQEVLQEVAVETYGALDKKEKTDFILEQVRLTLLKKDYVRALIQSRKINRKIIEGDDMQELKVRFYRLMLDYDLHEKDPFSLCCDYHAIFATAIIKADAQQRQAALKSCVVYLVLSPYTNTQQDMLHRVSRYPE--LDELTSYKTLLKLFTTYEIIDYPLPFAAELEAHIKESIAATGTD-PELGPPLL----------EQWLKDLHTRVVQHNIRVAAKYYKQIRTARLATLLGLDEGTTERSLSTMVSDGTLYARINRPEGIISFSKPQP--SEEVLSSWNSDLSSLLRLLEHTTHLINKETML 1350
+L+E+KD++ +++ ++P A L EGG+L EA+D LM LE+ CR+GND N T ++KRR Q I AM E M +LDE T++ L+ LR++TDG+IFVE ERA+LT+ LADIKE+DG V A ++LQEV VETYGAL KKEK +FILEQ+RL+L K+D+VRALI SRK+N+K++E D M +LK+++Y LM+ Y E + + LC YHAI T ++AD + QAAL + V++ LS Y N D L R+ + L +L +++ L TT EI+ YP+ A E+H ++AA+ P L PPLL E W LH RV QHNIRV AKYY+ IR ARLA LL LD +ER+++ +V +G L+ARI+RP GI+ F K + + VL WNSD+S LL L++ TTHLI KE ML
Sbjct: 27 QLKEKKDYSAEVESRLPGAQALAEGGQLREAIDGLMGLEKACRLGNDNISLKKLVLAMVKMCHAAGDWDMVNTTLLTISKRRSQSKVAIIAMTNEAMTYLDEPGLARTEVQKLLETLREVTDGRIFVEAERAKLTKRLADIKEEDGLVDEACDILQEVHVETYGALTKKEKAEFILEQIRLSLKKRDFVRALINSRKVNKKVLEEDGMDDLKLKYYLLMITYFQREANAWELCQCYHAILKTPKVRADEEAWQAALGATVLFRALSKYDNETSDFLFRLKEEEKDRLGQLPAFEELATALTTDEIVGYPMAAQAAYESHFSVNLAASPDGGPALMPPLLPGLENTFKAAEYWASLLHKRVTQHNIRVVAKYYRCIRIARLAQLLALDVAGSERAIAELVEEGDLWARIDRPAGIVKFRKTEDLSPDAVLGEWNSDISQLLGLVQETTHLIQKENML 482 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353549 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >mRNA_17023 ID=mRNA_17023|Name=jgi.p|Trimin1|353549|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1480bp|location=Sequence derived from alignment at Contig_169:232266..241161- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon. TGGCTCTCTGGTAGCAGCATCATGAGCGATCGCTTGGAAGAGCGCAAGGAback to top protein sequence of jgi.p|Trimin1|353549 >Trimin1|353549|estExt_Genemark1.C_Ctg_1690027 ID=Trimin1|353549|estExt_Genemark1.C_Ctg_1690027|Name=jgi.p|Trimin1|353549|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=450bp MSDRLEERKDFTEDLKVKVPEATRLTEGGKLNEALDLLMTLERNCRVGNDback to top mRNA from alignment at Contig_169:232266..241161- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_17023 ID=mRNA_17023|Name=jgi.p|Trimin1|353549|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8896bp|location=Sequence derived from alignment at Contig_169:232266..241161- (Tribonema minus UTEX_B_3156 )back to top Coding sequence (CDS) from alignment at Contig_169:232266..241161- >mRNA_17023 ID=mRNA_17023|Name=jgi.p|Trimin1|353549|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1350bp|location=Sequence derived from alignment at Contig_169:232266..241161- (Tribonema minus UTEX_B_3156 )back to top |