mRNA_17006 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353543
Unique Name	mRNA_17006
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353543 vs. uniprot
Match: A0A835ZFL9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFL9_9STRA)

HSP 1 Score: 1115 bits (2883), Expect = 0.000e+0
Identity = 1006/1006 (100.00%), Postives = 1006/1006 (100.00%), Query Frame = 1

Query:    1 MQVGFLDADRGAKELPPSLKLRRWIYPSRGFADPTQRIPAVTCLRISGGAMGYLAVGMSDGSVAVIRAGLSSLSAFARAEAEGGASVWYRYVGHAPHAVTALRWSRDERRLFSACAGGTVVSAFLPSPNHTRQSSTLVAGLALXXXXXXXXXXXARAMVVAKEGAPVVQLDWGEGVATAVRDVLLVVSPRRALLLYFSTRPPPDQPAPPGAGDVVASAAVDLDLRPVDIDGAGKAPLTHGGCLWGPLPEAGGDGAGDETGVSPPVVPTKAFVSQPGGRLWCMSLADGEVQSTHRPRFQASTNPFDAAIAAPEVNMGLLLPFIEGGPLLSWVPHDEDAAXXXXXXXXXXXXXXXXXXSAQPAVGEHAPPATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASXADTVAVAVPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSSGGXXXXRGETAXXXXXXXXXXXXXXXXXXXXXVVLVNPFANAVVCACGGELTGGVTALAAVGAVDDDPVYPPFFCAYALHGRGMVSRLLVTLRDLGLEPPSTPPMGDLRGASPGSAQQREAVTPVRRGASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVTALRRASDHALRGAEAVLDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGQGELSPGHRQRSSSLLLEVEQLVLATHEALGGQGDGQAAAQVANEGADDDLEARMRASDAATQHDTTNSRTAXXXXXXXXXXXXXXXXXXXXXRAIREVSDQYTSALASVSSVAAVPRATGQQGAAAAATGPLDRAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGGTAFGLLASWAKSMGQVPATSGLKELCDEAWASAAGFYAP 3018
            MQVGFLDADRGAKELPPSLKLRRWIYPSRGFADPTQRIPAVTCLRISGGAMGYLAVGMSDGSVAVIRAGLSSLSAFARAEAEGGASVWYRYVGHAPHAVTALRWSRDERRLFSACAGGTVVSAFLPSPNHTRQSSTLVAGLALXXXXXXXXXXXARAMVVAKEGAPVVQLDWGEGVATAVRDVLLVVSPRRALLLYFSTRPPPDQPAPPGAGDVVASAAVDLDLRPVDIDGAGKAPLTHGGCLWGPLPEAGGDGAGDETGVSPPVVPTKAFVSQPGGRLWCMSLADGEVQSTHRPRFQASTNPFDAAIAAPEVNMGLLLPFIEGGPLLSWVPHDEDAAXXXXXXXXXXXXXXXXXXSAQPAVGEHAPPATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASXADTVAVAVPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSSGGXXXXRGETAXXXXXXXXXXXXXXXXXXXXXVVLVNPFANAVVCACGGELTGGVTALAAVGAVDDDPVYPPFFCAYALHGRGMVSRLLVTLRDLGLEPPSTPPMGDLRGASPGSAQQREAVTPVRRGASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVTALRRASDHALRGAEAVLDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGQGELSPGHRQRSSSLLLEVEQLVLATHEALGGQGDGQAAAQVANEGADDDLEARMRASDAATQHDTTNSRTAXXXXXXXXXXXXXXXXXXXXXRAIREVSDQYTSALASVSSVAAVPRATGQQGAAAAATGPLDRAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGGTAFGLLASWAKSMGQVPATSGLKELCDEAWASAAGFYAP
Sbjct:    1 MQVGFLDADRGAKELPPSLKLRRWIYPSRGFADPTQRIPAVTCLRISGGAMGYLAVGMSDGSVAVIRAGLSSLSAFARAEAEGGASVWYRYVGHAPHAVTALRWSRDERRLFSACAGGTVVSAFLPSPNHTRQSSTLVAGLALXXXXXXXXXXXARAMVVAKEGAPVVQLDWGEGVATAVRDVLLVVSPRRALLLYFSTRPPPDQPAPPGAGDVVASAAVDLDLRPVDIDGAGKAPLTHGGCLWGPLPEAGGDGAGDETGVSPPVVPTKAFVSQPGGRLWCMSLADGEVQSTHRPRFQASTNPFDAAIAAPEVNMGLLLPFIEGGPLLSWVPHDEDAAXXXXXXXXXXXXXXXXXXSAQPAVGEHAPPATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAASXADTVAVAVPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLSSSGGXXXXRGETAXXXXXXXXXXXXXXXXXXXXXVVLVNPFANAVVCACGGELTGGVTALAAVGAVDDDPVYPPFFCAYALHGRGMVSRLLVTLRDLGLEPPSTPPMGDLRGASPGSAQQREAVTPVRRGASPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVTALRRASDHALRGAEAVLDEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGQGELSPGHRQRSSSLLLEVEQLVLATHEALGGQGDGQAAAQVANEGADDDLEARMRASDAATQHDTTNSRTAXXXXXXXXXXXXXXXXXXXXXRAIREVSDQYTSALASVSSVAAVPRATGQQGAAAAATGPLDRAPAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMGGTAFGLLASWAKSMGQVPATSGLKELCDEAWASAAGFYAP 1006

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353543 vs. uniprot

BLAST of jgi.p|Trimin1|353543 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A835ZFL9_9STRA	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_169	contig	Contig_169:114682..122872 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353543\|estExt_Genemark1.C_Ctg_1690011
Hectar predicted targeting category	other localisation
Ec32 ortholog description	WD40-repeat-containing domain
Ec32 ortholog	Ec-21_006370.1
TranscriptId	353865
Track	FilteredModels1
ProteinId	353543

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353543	gene_17006	Tribonema minus UTEX_B_3156	gene	Contig_169 114682..122872 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353543	Trimin1\|353543\|estExt_Genemark1.C_Ctg_1690011	Tribonema minus UTEX_B_3156	polypeptide	Contig_169 114682..122872 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_17006_9	exon_17006_9	Tribonema minus UTEX_B_3156	exon	Contig_169 114682..114756 -
exon_17006_8	exon_17006_8	Tribonema minus UTEX_B_3156	exon	Contig_169 115678..116130 -
exon_17006_7	exon_17006_7	Tribonema minus UTEX_B_3156	exon	Contig_169 116181..116270 -
exon_17006_6	exon_17006_6	Tribonema minus UTEX_B_3156	exon	Contig_169 117137..118669 -
exon_17006_5	exon_17006_5	Tribonema minus UTEX_B_3156	exon	Contig_169 118997..119211 -
exon_17006_4	exon_17006_4	Tribonema minus UTEX_B_3156	exon	Contig_169 120151..120272 -
exon_17006_3	exon_17006_3	Tribonema minus UTEX_B_3156	exon	Contig_169 121198..121422 -
exon_17006_2	exon_17006_2	Tribonema minus UTEX_B_3156	exon	Contig_169 121862..122138 -
exon_17006_1	exon_17006_1	Tribonema minus UTEX_B_3156	exon	Contig_169 122842..122872 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_17006	CDS_17006	Tribonema minus UTEX_B_3156	CDS	Contig_169 122842..122872 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_169:114682..122872-
coding sequence from alignment at Contig_169:114682..122872-

spliced messenger RNA

>mRNA_17006 ID=mRNA_17006|Name=jgi.p|Trimin1|353543|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3021bp|location=Sequence derived from alignment at Contig_169:114682..122872- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAAGTCGGATTCCTCGATGCGGACAGAGGCGCGAAGGAGCTGCCGCC
GAGCCTGAAGCTGCGGCGATGGATCTACCCCTCGCGCGGCTTTGCGGACC
CCACGCAGCGCATCCCAGCGGTGACGTGTCTGCGCATCAGTGGCGGCGCG
ATGGGCTACCTGGCGGTGGGCATGTCGGATGGGTCGGTGGCAGTGATCAG
GGCGGGGCTGTCATCGCTCAGCGCGTTTGCGCGCGCGGAGGCGGAGGGGG
GCGCCAGCGTGTGGTACCGCTACGTGGGGCACGCGCCGCACGCGGTGACA
GCGCTGAGGTGGAGCCGCGACGAGCGGAGACTGTTCTCGGCGTGTGCCGG
AGGAACTGTTGTAAGCGCATTCCTCCCCTCCCCGAATCACACGCGCCAGT
CTAGCACTCTGGTCGCAGGTCTCGCATTAGCGCTGGGGAAGGGGGCGGGG
CAGGGGTCGGGGGCACGGGCTATGGTGGTTGCTAAAGAGGGGGCTCCTGT
GGTGCAGCTGGACTGGGGGGAGGGCGTGGCGACGGCCGTGAGAGACGTGC
TGCTGGTGGTGTCCCCGCGCCGAGCGCTGCTGCTGTACTTCAGCACGCGG
CCGCCGCCCGACCAGCCCGCGCCGCCGGGCGCAGGGGACGTCGTCGCGAG
TGCAGCTGTGGATCTCGACTTGCGGCCAGTGGACATTGACGGAGCTGGCA
AGGCCCCCCTCACCCACGGCGGCTGCTTGTGGGGACCCCTTCCAGAGGCA
GGGGGCGATGGGGCGGGGGATGAGACGGGGGTCTCACCCCCTGTTGTGCC
CACAAAAGCCTTTGTGTCTCAGCCGGGGGGGCGCCTCTGGTGCATGTCTC
TGGCGGACGGGGAGGTGCAGTCCACCCACCGACCGCGATTCCAAGCCTCC
ACCAACCCCTTCGACGCAGCCATCGCCGCCCCAGAGGTCAATATGGGCCT
GCTACTGCCGTTCATAGAGGGCGGTCCTCTGCTGAGCTGGGTTCCCCATG
ATGAAGACGCTGCTGCTGCCGTCGCCGCCGCCGCCGCTGCTGCCGCTGCC
GCCGCTGCTGCAACAGCGAGTGCACAACCTGCTGTCGGCGAACACGCTCC
ACCTGCTACTGCTGCTGCTGGCGAAGGCACCAGCAGCAGCAGCGCCGCCG
CTGTTGATGCCGCTGATGGCGACAGCGCGGCTGCTGCCGACACCAGTGCC
CCTGCCACCGGCGCCAGCGCCAGCACCGCCAGCAGCAGCGACGCAAGCGC
TGATGCTGGCGCTGGAGGGTCTCCTGCCGCTGCGGACGCTGCCAGCGGTG
CAGATACTGTTGCCGTCGCTGTGCCAGGCGCTAATGCGTCCACCTCAGAA
ACACCAGAATCAGGCAGCACCACAGCTGACACCGGCACCAGCAGCGCTGG
GACTGCAGGCACTGGCCTCAGCAGCAGCGGCGGCGGCGGCGGCAGCAGAG
GCGAAACCGCCACTGCCGCAGGCGCGTCACAGCGAGCAACCACCGCCGCC
GCCGCCGCTGCCACCGCAGCAGCCGTCGTGCTCGTGAACCCATTCGCCAA
CGCGGTGGTGTGCGCGTGCGGCGGCGAGCTGACTGGCGGCGTGACGGCGC
TCGCGGCCGTCGGCGCCGTGGACGACGACCCCGTGTACCCGCCGTTCTTC
TGCGCGTACGCGCTGCACGGGCGCGGCATGGTCAGCCGCCTGCTCGTCAC
GCTGCGCGACCTGGGCCTTGAGCCCCCCTCGACGCCCCCCATGGGGGATT
TGAGAGGCGCCAGCCCCGGCAGCGCTCAGCAACGGGAGGCCGTGACGCCC
GTCAGGAGGGGCGCGTCACCGCCGCAGCAGCGGAGTCCGCAGGCGAGCGG
CGGCGGCGGCGGCAGCGGCAACCCGTTTGTGACCCCGCCGCAGCTGCGCG
GTGCGGGCGGCGGCAGCGCGTCCGCAGCGTCAGCGGGGGAGGCGTCGGCG
GAAGCGGCGGCGGCGGCGACGGCGGCGGCAGGGAGCAGCGGCGGCGGCGC
AGCAGCGGCGGAGGAGGAGGCGGCGGCAGCGGCGGCGCACGCGGCGGAGG
TCACGGCGCTGCGGCGCGCCAGCGACCACGCGCTGCGCGGCGCGGAGGCG
GTGCTCGATGAGGCGGCAGCGCTCACTGCAAGCTCGGACGAGGCTGCAAC
TGGCAACCCCCCCTCCGCCCGCCGCCGCCTCCGCGCATCCGCTGCCGCCG
CAGCTGCAGAGGGTGCGGCAGCAGCGGCGGCGGCGGCGGAGGCGGAAGAG
GAGGCGGCGGCAGAGGAGGAGGAGGGGCAGGGGGAGCTGAGTCCGGGGCA
CAGGCAGCGCAGCTCGTCACTGCTGCTGGAGGTCGAGCAGCTGGTGCTGG
CGACACACGAGGCGCTGGGGGGGCAGGGGGACGGTCAAGCCGCAGCGCAA
GTGGCCAACGAGGGCGCCGACGACGACCTGGAGGCGCGCATGCGCGCGAG
CGACGCCGCCACGCAGCATGACACGACGAACTCACGCACCGCAGCCGGTG
ATGGCGCCGACGATGACCTGGAGACGCGCATGCGCGCGAGCGACGCCGCC
ACGCAGCGCGCCATCCGCGAGGTCTCCGACCAGTACACAAGCGCGCTGGC
CTCCGTGTCGAGCGTTGCTGCCGTGCCTCGCGCCACCGGTCAGCAAGGCG
CCGCTGCCGCCGCCACCGGGCCGCTTGACCGCGCACCCGCGGCAGCAGCG
GCGGCAGCAGGGGCGCCGCTGACGCCGCCATCGGCAGCAGCGGCGGTAGC
AGCAGCGGCGGCGGCAGCGGATGGCGATGGTGGCAGCGGAGAAGCAGCAG
CGCTCGGCAACAGCGGCAGGCATCGCCGCCAGAGCTCAGCGCCTGTTGGC
GGCGCAGCGGGAGGCGCGGGTTCGCCGGGTGGGGGAGGGGGCATGGGCGG
CACGGCGTTTGGGTTGCTGGCCAGCTGGGCCAAGTCTATGGGGCAGGTCC
CCGCAACTTCCGGACTCAAGGAACTGTGCGACGAGGCCTGGGCCTCTGCG
GCAGGGTTTTACGCGCCTTGA

protein sequence of jgi.p|Trimin1|353543

>Trimin1|353543|estExt_Genemark1.C_Ctg_1690011 ID=Trimin1|353543|estExt_Genemark1.C_Ctg_1690011|Name=jgi.p|Trimin1|353543|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=1007bp
MQVGFLDADRGAKELPPSLKLRRWIYPSRGFADPTQRIPAVTCLRISGGA
MGYLAVGMSDGSVAVIRAGLSSLSAFARAEAEGGASVWYRYVGHAPHAVT
ALRWSRDERRLFSACAGGTVVSAFLPSPNHTRQSSTLVAGLALALGKGAG
QGSGARAMVVAKEGAPVVQLDWGEGVATAVRDVLLVVSPRRALLLYFSTR
PPPDQPAPPGAGDVVASAAVDLDLRPVDIDGAGKAPLTHGGCLWGPLPEA
GGDGAGDETGVSPPVVPTKAFVSQPGGRLWCMSLADGEVQSTHRPRFQAS
TNPFDAAIAAPEVNMGLLLPFIEGGPLLSWVPHDEDAAAAVAAAAAAAAA
AAAATASAQPAVGEHAPPATAAAGEGTSSSSAAAVDAADGDSAAAADTSA
PATGASASTASSSDASADAGAGGSPAAADAASGADTVAVAVPGANASTSE
TPESGSTTADTGTSSAGTAGTGLSSSGGGGGSRGETATAAGASQRATTAA
AAAATAAAVVLVNPFANAVVCACGGELTGGVTALAAVGAVDDDPVYPPFF
CAYALHGRGMVSRLLVTLRDLGLEPPSTPPMGDLRGASPGSAQQREAVTP
VRRGASPPQQRSPQASGGGGGSGNPFVTPPQLRGAGGGSASAASAGEASA
EAAAAATAAAGSSGGGAAAAEEEAAAAAAHAAEVTALRRASDHALRGAEA
VLDEAAALTASSDEAATGNPPSARRRLRASAAAAAAEGAAAAAAAAEAEE
EAAAEEEEGQGELSPGHRQRSSSLLLEVEQLVLATHEALGGQGDGQAAAQ
VANEGADDDLEARMRASDAATQHDTTNSRTAAGDGADDDLETRMRASDAA
TQRAIREVSDQYTSALASVSSVAAVPRATGQQGAAAAATGPLDRAPAAAA
AAAGAPLTPPSAAAAVAAAAAAADGDGGSGEAAALGNSGRHRRQSSAPVG
GAAGGAGSPGGGGGMGGTAFGLLASWAKSMGQVPATSGLKELCDEAWASA
AGFYAP*

mRNA from alignment at Contig_169:114682..122872-

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_17006 ID=mRNA_17006|Name=jgi.p|Trimin1|353543|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=8191bp|location=Sequence derived from alignment at Contig_169:114682..122872- (Tribonema minus UTEX_B_3156 )
ATGCAAGTCGGATTCCTCGATGCGGACAGAGGTGCTGCTGTTGCCTGGCC
CTGCGTCGGCATATTCGAGCGGTAGCGGCGGCAGGAGACCACCCATTACC
TATCAGTGTATATCGGCCTCCAAGCTTTTTGTTGCATGTGGCACAAATAC
CGGAGCTGTACATATACACTCGTGGGCGGATCGCACCCCCCCTGCGCATA
GTGCTGCAGCAGGTGAGCATTTGTGTATTGTGATCTGCTGAACTCTTTTT
GTGCCGAAAATGGTGTCCCTTTGCTTTCGGCGATCTGTGCTTTTATGTGC
AAGTGGTATGACAACTTGATGCTGGCACATCCTGCATGCACGCAAGAGCA
GCAGCAGCAGCAGCAGCAGCAAAGAGTGTGCAAGTTTGCTCTGATAACAT
ATTTTTGATGGAAGTTCACTCTTTATTGTGGATATACACGTGTCGATTGC
CTCTCGGGCACCACTTGGCATGCTGAGAACCGCTGCTTAAACTTCGACCA
CACCTCCAGGCTTCATCGTTTCAATGTGGTCCGTGCCCACATGTACATAC
ATATGTATATGCAACACATTGAACATGGGCAAATTTGTACAACTGCAGCA
TCCCATCACTGCGAAGTGGCAAGGCCACACGCTTGGCTGCGTGCGCATGC
TTTCATCTGCTGTTGACGGCACTGCTGACCCTTCACCGCTCTGTCTGCCC
CCCCCTCAAACACCCACAAACCGCCACGCGCCAGGCGCGAAGGAGCTGCC
GCCGAGCCTGAAGCTGCGGCGATGGATCTACCCCTCGCGCGGCTTTGCGG
ACCCCACGCAGCGCATCCCAGCGGTGACGTGTCTGCGCATCAGTGGCGGC
GCGATGGGCTACCTGGCGGTGGGCATGTCGGATGGGTCGGTGGCAGTGAT
CAGGGCGGGGCTGTCATCGCTCAGCGCGTTTGCGCGCGCGGAGGCGGAGG
GGGGCGCCAGCGTGTGGTACCGCTACGTGGGGCACGCGCCGCACGCGGTG
ACAGCGCTGAGGTGAGTTGAAGTGGCGGTTGAGGTTGATGGCTGCTGAGG
GGGGGGCGCCTGTGCAGTGGTGTAGCAGTGGGACAATGTCGGACGGGTCG
GTGGCGGTGATCAGGGCGGGGATGTCATCGCTCTGAGGTGAAGTTGAAGT
GGCGGTGTGTAGCGCCCTGATGGTGTCAGTTGAAGTTGCTGGTCGCTGAA
GGGGCGCCTTGTGCAGTGCTGTAGCAGCGGGACCGTGTCGACGCCTTGAT
GCCTTATTATTATGTGTGTGGCACATCCCAAGTTCCTCAACAGTACCTAA
TCACATAATCATGGATGCTGTCCGTATATTAGATTGGTGGAAGGCACTTG
CGGCTAACCACTTCTTGTCACCTAGAGCTCTACAATCTTTTGAATCGTTT
TCGTTAAACTCTCAATGGTGTCTGTGCCCAAAACTGTATGTCCGCTGCAG
GTGGAGCCGCGACGAGCGGAGACTGTTCTCGGCGTGTGCCGGAGGAACTG
TTGTAAGCGCATTCCTCCCCTCCCCGAATCACACGCGCCAGTCTAGCACT
CTGGTCGCAGGTCTCGCATTAGCGCTGGGGAAGGGGGCGGGGCAGGGGTC
GGGGGCACGGGCTATGGTGGTTGCTAAAGAGGGGGCTCCTGTGGTGCAGC
TGGACTGGGGGGAGGGCGTGGCGACGTCGGTTGGGGGCATTGGGTAGGTA
TCCTGTGGTCACATACATACATGCCTTTTGTGTGTGGCGCGTTCCAGCGT
GCCTAGAGGTTGTGCTCACTGCTGTGGACTCTGTACTGTTTCACTGATAT
TCCCAAGTAAAGTGTGTGAGCGCCTTTAATTCTCACAGCGGGCATAAATA
GTGATTGTCGAGGCCTATGTTTAATTGAAGTTGTACTGTAGGTACTGGAT
GAGCACTGATTTTTAAATGTAGACGTGTAGGCAATATGCATGGTGCTGCT
GTCAGGGTTTGACAACGCTGAAGTAGAGGAATTGATGGGTGGTGCATGGA
AGTCAGTAAGGTTAGGATTTTCATACATAGACAACTGTTGCTCTCCCAGC
AGCTACAGCAGTACTGAATGTGTGATAATTTGTGATACTCCAGGCATCTT
GCAGTGGATTTACTGCAGCTCTTCGCATGCAGGTGCTAGGAATATCATAC
TTATAGAACTGTTGCTGTTCTCCGAGCAGCTACAGCAGTACTGCATGTGT
AAGACACCAGGCATCAGGCAGAGAAGTTACTGCAGCTCTGCGCATGCAAT
GCGTACTGCAGTGCAGCAGACAGCCCCCAGCAGTCTTGCTTGTCACATGA
CTGCCTCCAAGCACTGCACATGTTTGGGGTGCCACATCCATGATTTGTCT
CAATCCGTGCCTGTGTAGTTACCTCTAGAGATTGTGAGGACCCGCGATAG
AAGCACCATGCTGAGCGCTGCTGCTCCGCAGCTCCGCACCAGCGCTCATC
CACCGTGATGATTAACACACATCTGGTGTTTTTCGGTCGTTCTGCTCTGC
GCACCGCGCATCTCACCGCACTCTGCACCTTCTCCTGAGCTGCTTGTTGA
ACCTCAAATTGCTTTTGTTGACTTGCCTATTGCTTGTTGAATTACAACAG
GGCCGTGAGAGACGTGCTGCTGGTGGTGTCCCCGCGCCGAGCGCTGCTGC
TGTACTTCAGCACGCGGCCGCCGCCCGACCAGCCCGCGCCGCCGGGCGCA
GGGGACGTCGTCGCGAGTGCAGGTATGTATGCATCCCACGCACCTTGCTC
CTAGGGTTAGAGCTAGGGTGAGGGTCGTCGCGAGTGCAGGTATGTATGCA
TCCCATGCGACTTATATGTAGGGTTAGAGCTAGGGTAGGGTCGTCTCGAG
TGCATTTATGTATACATCCCATACAACTTGTTCCTTGGTTGGGGTTAGAA
TTAGGGTTAAGGTCAGGGTTAGTGGCGGCGCACTCCGTCACAGGTTGTTG
TGTCTGAGTGAGTGACGAGGGCTAAAGTCTTGCGACGAAACGACAAGTGA
AGAAAGATGTGCTTGCTCGGCTGTGTATGCTGGCCACATCCCTGAGCTCT
AGACGTAGCAACCCTAGATTAGGGCTAGGTCAGCGAGATCAAGTTCGCAT
GACAAAATGACAAGTGAAAGGATGTGCCAACCTGCTGTGTATGCTGTCCG
CGTTGTTGAATTTTAGCGTTGGGTAGGTCTACGGTTAGGTTTGAGGACTT
CACATCATCTGTCCCTGCTCGCAAGCAGCAATCCACTCACTTGGGGACCA
TCCCTGCTCGATTGCAGGAATCGTTCCTGACCTCTCACCCTTGACCCCGT
ATGCAAGGCTCAGCAGCTGCATCAACTCAACTTCGTGTTCTTGTACCCAA
TGCCGTACACTCAATGCCTGTTGATGTCTTGCATATGTCTGTGTTTGTCA
TCGGCAGCCGCGGGATTGCGTATGCACCCTTCTGACATTTGATTGGCAAG
ACATTTTTCTCGTTGTACTCAAAAGCAGCTACCCCTGCGGGAGAGGCTGG
ACAGTGGGGCGGGGACACGGAACATGTCGCCAACTCGAACGCGTTGCACC
TCACATTTCTGGAACTTCATGTACACAACATCAACTCGCCTCGAAGCTGT
CGCTTTTCACCTCCAATGCATTCAACGTCTTCGCTTCACCTCTGTACTCT
CGCCCCCGCAGCTGTGGATCTCGACTTGCGGCCAGTGGACATTGACGGAG
CTGGCAAGGCCCCCCTCACCCACGGCGGCTGCTTGTGGGGACCCCTTCCA
GAGGCAGGGGGCGATGGGGCGGGGGATGAGACGGGGGTCTCACCCCCTGT
TGTGCCCACAAAAGCCTTTGTGTCTCAGCCGGGGGGGCGCCTCTGGTGCA
TGTCTCTGGCGGACGGGGAGGTGCAGGTGAGACGTGCCGCTCGCATGCAG
TGTTGAAGTTGAAATCTTGAAGTTGACAGAAGTCACATGTGACGTGCCGT
CGCCAAGCGCTTGTGCCGTGCAAGGGGAGCAGTGTTGCTGCCAGTCATTG
GCAGCTCAGAAGGCGCAGGTGTGAGCTACATAGTGCCTCATACACACATA
CTTGAACTTGATTCAAGTTTCTACCTCATAATACTGACGCATGTCGAGCT
GCGTCGCCGCACCTATGCGCCACGTCATGCGTTGCCATTTACATGCGGCA
TGATGATAATCGCTCCCCCCTTGCGCTGTCTGTTACAACTTCAACTTCTG
CAGTCCACCCACCGACCGCGATTCCAAGCCTCCACCAACCCCTTCGACGC
AGCCATCGCCGCCCCAGAGGTCAATATGGGCCTGCTACTGCCGTTCATAG
AGGGCGGTCCTCTGCTGAGCTGGGTTCCCCATGATGAAGACGCTGCTGCT
GCCGTCGCCGCCGCCGCCGCTGCTGCCGCTGCCGCCGCTGCTGCAACAGC
GAGTGCACAACCTGCTGTCGGCGAACACGCTCCACCTGCTACTGCTGCTG
CTGGCGAAGGCACCAGCAGCAGCAGCGCCGCCGCTGTTGATGCCGCTGAT
GGCGACAGCGCGGCTGCTGCCGACACCAGTGCCCCTGCCACCGGCGCCAG
CGCCAGCACCGCCAGCAGCAGCGACGCAAGCGCTGATGCTGGCGCTGGAG
GGTCTCCTGCCGCTGCGGACGCTGCCAGCGGTGCAGATACTGTTGCCGTC
GCTGTGCCAGGCGCTAATGCGTCCACCTCAGAAACACCAGAATCAGGCAG
CACCACAGCTGACACCGGCACCAGCAGCGCTGGGACTGCAGGCACTGGCC
TCAGCAGCAGCGGCGGCGGCGGCGGCAGCAGAGGCGAAACCGCCACTGCC
GCAGGCGCGTCACAGCGAGCAACCACCGCCGCCGCCGCCGCTGCCACCGC
AGCAGCCGTCGTGCTCGTGAACCCATTCGCCAACGCGGTGGTGTGCGCGT
GCGGCGGCGAGCTGACTGGCGGCGTGACGGCGCTCGCGGCCGTCGGCGCC
GTGGACGACGACCCCGTGTACCCGCCGTTCTTCTGCGCGTACGCGCTGCA
CGGGCGCGGCATGGTCAGCCGCCTGCTCGTCACGCTGCGCGACCTGGGCC
TTGAGCCCCCCTCGACGCCCCCCATGGGGGATTTGAGAGGCGCCAGCCCC
GGCAGCGCTCAGCAACGGGAGGCCGTGACGCCCGTCAGGAGGGGCGCGTC
ACCGCCGCAGCAGCGGAGTCCGCAGGCGAGCGGCGGCGGCGGCGGCAGCG
GCAACCCGTTTGTGACCCCGCCGCAGCTGCGCGGTGCGGGCGGCGGCAGC
GCGTCCGCAGCGTCAGCGGGGGAGGCGTCGGCGGAAGCGGCGGCGGCGGC
GACGGCGGCGGCAGGGAGCAGCGGCGGCGGCGCAGCAGCGGCGGAGGAGG
AGGCGGCGGCAGCGGCGGCGCACGCGGCGGAGGTCACGGCGCTGCGGCGC
GCCAGCGACCACGCGCTGCGCGGCGCGGAGGCGGTGCTCGATGAGGCGGC
AGCGCTCACTGCAAGCTCGGACGAGGCTGCAACTGGCAACCCCCCCTCCG
CCCGCCGCCGCCTCCGCGCATCCGCTGCCGCCGCAGCTGCAGAGGGTGCG
GCAGCAGCGGCGGCGGCGGCGGAGGCGGAAGAGGAGGCGGCGGCAGAGGA
GGAGGAGGGGCAGGGGGAGCTGAGTCCGGGGCACAGGCAGCGCAGCTCGT
CACTGCTGCTGGAGGTCGAGCAGCTGGTGCTGGCGACACACGAGGCGCTG
GGGGGGCAGGGGGACGGTCAAGCCGCAGCGCAAGTGGTGAGCGCTGCTTT
GCCCCTCAGCATAAACAGCTGCTGTGCTTGTTGCCATAGCTTTTCTGCGG
ACTTCTCGCACGCTTTGTGAGTGCAGTGACTGTGAGGTCAGGCTGCTGTG
CCATGCTCATTATGAGAGACCTTGACGTACTGCACGGCGCAAGTGAATCT
GTGCGCGACAATTGATCACAGCCTTGAGGTGTCAATGCCGCGCGCATCAC
AGCAGCAGCGTGAAAAGAAAGCCTTGCACAGTGTGGCCCAATACTCATCA
TTTGAACTGTGCGGCAGACTGTGTGGCCCAGAGTGGGGCAAACTCTGGCG
GTTGGGTGAGGCTGCGGCGTCTTGAATGTGCCTTGTTGCATTGCTCAACT
TGATGTTGCAGATGGAGCGCATGCCGCGCTCCCGCGACCTGAGCGCTGTC
ATCAAAGCGCGCCGTTTTGCGCACTTCAAAGCGCCAACGCGTGTCTGCGT
TGCTGATGTCTACAATGCGTCTCCTGGCGCGGGGCACAAATGCTGCTGTC
ATCGCACGAGCTACGGGCAGGGGGCTCACGACTCCCCAATTGTGGGCATC
ATAATTTGCTCCATTGTCACGTTCGCGCCGCAACGCAGAGTACAGTTCAG
AGAAGTCGCTGCGCGCATGTGGGCTCCGCAGCACGACGCATCAAACTCAC
ACGCCGCTTGCTGCAACGGACCGACACGAGGACAATGGCAATGTGTGCCA
TTGCGCAGGCTGATGAGGGCGTTGCCTCAGCGTATGGCTCTCAGGAGCCG
CTGTGCGCATGGAGGCTCCGCAGCACCCCGCATGGAACTCACACGCCGTT
TGCTGCAACTGACTGACACGAGGACACCATGACCACGTATGTCACTGCTC
AGGCCAACGAGGGCGCCGACGACGACCTGGAGGCGCGCATGCGCGCGAGC
GACGCCGCCACGCAGCATGACACGACGAACTCACGCACCGCAGTTGAATG
ACACGAGGACAATGATGATTTCATTGCGATGTCATCGCGCAGGCCGGTGA
TGGCGCCGACGATGACCTGGAGACGCGCATGCGCGCGAGCGACGCCGCCA
CGCAGCGCGCCATCCGCGAGGTCTCCGACCAGTACACAAGCGCGCTGGCC
TCCGTGTCGAGCGTTGCTGCCGTGCCTCGCGCCACCGGTCAGCAAGGCGC
CGCTGCCGCCGCCACCGGGCCGCTTGACCGCGCACCCGCGGCAGCAGCGG
CGGCAGCAGGGGCGCCGCTGACGCCGCCATCGGCAGCAGCGGCGGTAGCA
GCAGCGGCGGCGGCAGCGGATGGCGATGGTGGCAGCGGAGAAGCAGCAGC
GCTCGGCAACAGCGGCAGGCATCGCCGCCAGAGCTCAGCGCCTGTTGGCG
GCGCAGCGGGAGGCGCGGGTTCGCCGGGTGGGGGAGGGGGCATGGGCGGC
ACGGCGTTTGGGTTGCTGGCCAGCTGGGCCAAGTCTATGGGGCAGGTTAG
TACAGTATTATGAATGCTATTGGGCAGATTAGTACAGTTGTATGGGTAAG
GATTGTACTAGGGTGTTGTGCTGCAGGCGGTCAAGCATACTTTCTGCCAT
GAGCATAGTTTGATGCTTGAGACTGCAGATTTTGGAATTCATCATCTAAA
TAACTGCGCGTTGCATCAGCTGCGCGGATGTCCTAGTGGGCTGGACACCA
TCATAATTGAGAAGCTGCACGCGCCACTCAAATGCATATGTTCACGAGTG
GAGAGGGCGAGAGCAGTACCGTGCAGCAGCGCTCAGGTGCAGCGCTCAAA
ACAACTCAGCAGCTGCGCTGCTCCACCTGACGCAGCTGCGTGTCTGCAGA
AGCGCGCAAGGCAGTCCACCAAGCCCTTTCAAAATCAATACATACCTTTT
GAAAAATGTGGGGCCCGCGCACAGCTGTGCTCATTGCTGAGCATTGCTGT
AACTGGAAGTGCAAGCGCAGGCGGTTCAACCAGAATTGCAGTCGATCCTT
CCTCGAATGGTTGATTTGGGGAGGTTAAGTTGAAGTGAACGCATGCATGC
AGGACACCGTCTGGTCTGCTAAGTGGGCAGATGCAGCTACACTGTACTGG
CTGATGAGGGCACTCTGCAAGGCCGCAAGGAAGTTTGAGGTATTGAAGTC
CAGGCTTGCTCATTCCGGCAGACTGCGGCCCCTGCCGTCTGGTTTTCGAT
ACAGCGCCTGAAGTCCCACACATATGATGACCTGCAATGAACGGGTTCAG
CCCGCTGCTTTGTAGGTCTGGGTGCAAAGTGGCAGTTCCATCGTGCGAGG
ACAGTACCCCCTGGGTTGAAGTTGCAGCTAGTTCAATGCGCATGCCAGCC
TGCAGCATGCGCGCGGGGCGGGCAGTCGCTCAACCGCACTGTACCCCCGG
GTGTTGGCTGTTGCAGGTCCCCGCAACTTCCGGACTCAAGGAACTGTGCG
ACGAGGCCTGGGCCTCTGCGGCAGGGTTTTACGCGCCTTGA

Coding sequence (CDS) from alignment at Contig_169:114682..122872-

>mRNA_17006 ID=mRNA_17006|Name=jgi.p|Trimin1|353543|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=3021bp|location=Sequence derived from alignment at Contig_169:114682..122872- (Tribonema minus UTEX_B_3156 )
ATGCAAGTCGGATTCCTCGATGCGGACAGAGGCGCGAAGGAGCTGCCGCC
GAGCCTGAAGCTGCGGCGATGGATCTACCCCTCGCGCGGCTTTGCGGACC
CCACGCAGCGCATCCCAGCGGTGACGTGTCTGCGCATCAGTGGCGGCGCG
ATGGGCTACCTGGCGGTGGGCATGTCGGATGGGTCGGTGGCAGTGATCAG
GGCGGGGCTGTCATCGCTCAGCGCGTTTGCGCGCGCGGAGGCGGAGGGGG
GCGCCAGCGTGTGGTACCGCTACGTGGGGCACGCGCCGCACGCGGTGACA
GCGCTGAGGTGGAGCCGCGACGAGCGGAGACTGTTCTCGGCGTGTGCCGG
AGGAACTGTTGTAAGCGCATTCCTCCCCTCCCCGAATCACACGCGCCAGT
CTAGCACTCTGGTCGCAGGTCTCGCATTAGCGCTGGGGAAGGGGGCGGGG
CAGGGGTCGGGGGCACGGGCTATGGTGGTTGCTAAAGAGGGGGCTCCTGT
GGTGCAGCTGGACTGGGGGGAGGGCGTGGCGACGGCCGTGAGAGACGTGC
TGCTGGTGGTGTCCCCGCGCCGAGCGCTGCTGCTGTACTTCAGCACGCGG
CCGCCGCCCGACCAGCCCGCGCCGCCGGGCGCAGGGGACGTCGTCGCGAG
TGCAGCTGTGGATCTCGACTTGCGGCCAGTGGACATTGACGGAGCTGGCA
AGGCCCCCCTCACCCACGGCGGCTGCTTGTGGGGACCCCTTCCAGAGGCA
GGGGGCGATGGGGCGGGGGATGAGACGGGGGTCTCACCCCCTGTTGTGCC
CACAAAAGCCTTTGTGTCTCAGCCGGGGGGGCGCCTCTGGTGCATGTCTC
TGGCGGACGGGGAGGTGCAGTCCACCCACCGACCGCGATTCCAAGCCTCC
ACCAACCCCTTCGACGCAGCCATCGCCGCCCCAGAGGTCAATATGGGCCT
GCTACTGCCGTTCATAGAGGGCGGTCCTCTGCTGAGCTGGGTTCCCCATG
ATGAAGACGCTGCTGCTGCCGTCGCCGCCGCCGCCGCTGCTGCCGCTGCC
GCCGCTGCTGCAACAGCGAGTGCACAACCTGCTGTCGGCGAACACGCTCC
ACCTGCTACTGCTGCTGCTGGCGAAGGCACCAGCAGCAGCAGCGCCGCCG
CTGTTGATGCCGCTGATGGCGACAGCGCGGCTGCTGCCGACACCAGTGCC
CCTGCCACCGGCGCCAGCGCCAGCACCGCCAGCAGCAGCGACGCAAGCGC
TGATGCTGGCGCTGGAGGGTCTCCTGCCGCTGCGGACGCTGCCAGCGGTG
CAGATACTGTTGCCGTCGCTGTGCCAGGCGCTAATGCGTCCACCTCAGAA
ACACCAGAATCAGGCAGCACCACAGCTGACACCGGCACCAGCAGCGCTGG
GACTGCAGGCACTGGCCTCAGCAGCAGCGGCGGCGGCGGCGGCAGCAGAG
GCGAAACCGCCACTGCCGCAGGCGCGTCACAGCGAGCAACCACCGCCGCC
GCCGCCGCTGCCACCGCAGCAGCCGTCGTGCTCGTGAACCCATTCGCCAA
CGCGGTGGTGTGCGCGTGCGGCGGCGAGCTGACTGGCGGCGTGACGGCGC
TCGCGGCCGTCGGCGCCGTGGACGACGACCCCGTGTACCCGCCGTTCTTC
TGCGCGTACGCGCTGCACGGGCGCGGCATGGTCAGCCGCCTGCTCGTCAC
GCTGCGCGACCTGGGCCTTGAGCCCCCCTCGACGCCCCCCATGGGGGATT
TGAGAGGCGCCAGCCCCGGCAGCGCTCAGCAACGGGAGGCCGTGACGCCC
GTCAGGAGGGGCGCGTCACCGCCGCAGCAGCGGAGTCCGCAGGCGAGCGG
CGGCGGCGGCGGCAGCGGCAACCCGTTTGTGACCCCGCCGCAGCTGCGCG
GTGCGGGCGGCGGCAGCGCGTCCGCAGCGTCAGCGGGGGAGGCGTCGGCG
GAAGCGGCGGCGGCGGCGACGGCGGCGGCAGGGAGCAGCGGCGGCGGCGC
AGCAGCGGCGGAGGAGGAGGCGGCGGCAGCGGCGGCGCACGCGGCGGAGG
TCACGGCGCTGCGGCGCGCCAGCGACCACGCGCTGCGCGGCGCGGAGGCG
GTGCTCGATGAGGCGGCAGCGCTCACTGCAAGCTCGGACGAGGCTGCAAC
TGGCAACCCCCCCTCCGCCCGCCGCCGCCTCCGCGCATCCGCTGCCGCCG
CAGCTGCAGAGGGTGCGGCAGCAGCGGCGGCGGCGGCGGAGGCGGAAGAG
GAGGCGGCGGCAGAGGAGGAGGAGGGGCAGGGGGAGCTGAGTCCGGGGCA
CAGGCAGCGCAGCTCGTCACTGCTGCTGGAGGTCGAGCAGCTGGTGCTGG
CGACACACGAGGCGCTGGGGGGGCAGGGGGACGGTCAAGCCGCAGCGCAA
GTGGCCAACGAGGGCGCCGACGACGACCTGGAGGCGCGCATGCGCGCGAG
CGACGCCGCCACGCAGCATGACACGACGAACTCACGCACCGCAGCCGGTG
ATGGCGCCGACGATGACCTGGAGACGCGCATGCGCGCGAGCGACGCCGCC
ACGCAGCGCGCCATCCGCGAGGTCTCCGACCAGTACACAAGCGCGCTGGC
CTCCGTGTCGAGCGTTGCTGCCGTGCCTCGCGCCACCGGTCAGCAAGGCG
CCGCTGCCGCCGCCACCGGGCCGCTTGACCGCGCACCCGCGGCAGCAGCG
GCGGCAGCAGGGGCGCCGCTGACGCCGCCATCGGCAGCAGCGGCGGTAGC
AGCAGCGGCGGCGGCAGCGGATGGCGATGGTGGCAGCGGAGAAGCAGCAG
CGCTCGGCAACAGCGGCAGGCATCGCCGCCAGAGCTCAGCGCCTGTTGGC
GGCGCAGCGGGAGGCGCGGGTTCGCCGGGTGGGGGAGGGGGCATGGGCGG
CACGGCGTTTGGGTTGCTGGCCAGCTGGGCCAAGTCTATGGGGCAGGTCC
CCGCAACTTCCGGACTCAAGGAACTGTGCGACGAGGCCTGGGCCTCTGCG
GCAGGGTTTTACGCGCCTTGA