Trimin1|178423|e_gw1.169.60.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|178423
Unique NameTrimin1|178423|e_gw1.169.60.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length532
Homology
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BLAST of jgi.p|Trimin1|178423 vs. uniprot
Match: A0A835Z6S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6S9_9STRA)

HSP 1 Score: 558 bits (1438), Expect = 8.640e-193
Identity = 531/531 (100.00%), Postives = 531/531 (100.00%), Query Frame = 0 
Query:    1 MTSWWRLKKQLQESNAAHTRRAVAREELFLSVLPRAAAGSQICEFAAGIGSVPLLERVRAQAPPFEWSNETSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSSRLATVAAFEGHLDALQYLHQEGCAWDESTTAAAAAGDHLHVLQWCRAATPPXXXXXXXXXXXXXXXXXXXXXXLLPELLRQGVGCLIPGSLLSRAANAGHLAMLQWMAANAPAGQPLWTASDDAVDACTKAAAHGHLDVLRCLRGELKCPWNEEXXXXXXXXXXXXXXQWLHAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAKKHETXXXXXXXXXXXXXXXXXXXXXXWDASTTAAALKPAXXXXXXXXXXXXXXXXXXXXXXXARHGLIDILMELHVLQGKKNSGVKRKCISLLAMNAAAAGGQLATVQWLRSLTPPCPWSVMTCVNAARSGNYELLRWMR 531
            MTSWWRLKKQLQESNAAHTRRAVAREELFLSVLPRAAAGSQICEFAAGIGSVPLLERVRAQAPPFEWSNETSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSSRLATVAAFEGHLDALQYLHQEGCAWDESTTAAAAAGDHLHVLQWCRAATPPXXXXXXXXXXXXXXXXXXXXXXLLPELLRQGVGCLIPGSLLSRAANAGHLAMLQWMAANAPAGQPLWTASDDAVDACTKAAAHGHLDVLRCLRGELKCPWNEEXXXXXXXXXXXXXXQWLHAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAKKHETXXXXXXXXXXXXXXXXXXXXXXWDASTTAAALKPAXXXXXXXXXXXXXXXXXXXXXXXARHGLIDILMELHVLQGKKNSGVKRKCISLLAMNAAAAGGQLATVQWLRSLTPPCPWSVMTCVNAARSGNYELLRWMR
Sbjct:    1 MTSWWRLKKQLQESNAAHTRRAVAREELFLSVLPRAAAGSQICEFAAGIGSVPLLERVRAQAPPFEWSNETSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSSRLATVAAFEGHLDALQYLHQEGCAWDESTTAAAAAGDHLHVLQWCRAATPPXXXXXXXXXXXXXXXXXXXXXXLLPELLRQGVGCLIPGSLLSRAANAGHLAMLQWMAANAPAGQPLWTASDDAVDACTKAAAHGHLDVLRCLRGELKCPWNEEXXXXXXXXXXXXXXQWLHAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXFAKKHETXXXXXXXXXXXXXXXXXXXXXXWDASTTAAALKPAXXXXXXXXXXXXXXXXXXXXXXXARHGLIDILMELHVLQGKKNSGVKRKCISLLAMNAAAAGGQLATVQWLRSLTPPCPWSVMTCVNAARSGNYELLRWMR 531
[Close]
BLAST of jgi.p|Trimin1|178423 vs. uniprot
Match: A0A835Z7E6_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E6_9STRA)

HSP 1 Score: 297 bits (761), Expect = 1.600e-91
Identity = 241/305 (79.02%), Postives = 261/305 (85.57%), Query Frame = 0 
Query:    1 MTSWWRLKKQLQESNAAHTRRAVAREELFLSVLPRAAAGSQICEFAAGIGSVPLLERVRAQAPPFEWSNETSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSSRLATVAAFEGHLDALQYLHQEGCAWDESTTAAAAAGDHLHVLQWCRAATPPXXXXXXXXXXXXXXXXXXXXXXLLPELLRQGVGCLIPGSLLSRAANAGHLAMLQWMAANAPAGQPLWTASDDAVDACTKAAAHGHLDVLRCLRGELKCPWNEEXXXXXXXXXXXXXXQWLHAGG 305
            M +WW+L++Q++ +NAA T+RA AREELFLSVLPRAAAGSQ CEFAA IGS PLLER+RAQ PPFEWS ETS+AA      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   S RLA +AAFEGHLD LQYL ++GCAWD+STTAAAAAG HLHVLQWCRAA PPXXXXXXXXXXXXXXXXXXXXXXL+PELLR+GV  L+  SL+S A            A NAPAGQPLWTASD+A DACT AAAHGHLDVLRCLRGEL+CPWNEEXXXXXXXXXXXXXXQWLHAGG
Sbjct:    1 MVAWWQLQRQVEGNNAARTKRAFAREELFLSVLPRAAAGSQTCEFAASIGSAPLLERLRAQVPPFEWSTETSIAAVGGGHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATSPRLANIAAFEGHLDVLQYLREQGCAWDDSTTAAAAAGGHLHVLQWCRAAVPPXXXXXXXXXXXXXXXXXXXXXXLIPELLREGVRWLVCISLMSTAXXXXXXXXXXXXAENAPAGQPLWTASDNAADACTIAAAHGHLDVLRCLRGELRCPWNEEXXXXXXXXXXXXXXQWLHAGG 305
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|178423 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A835Z6S9_9STRA8.640e-193100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z7E6_9STRA1.600e-9179.02Ankyrin repeat-containing domain protein (Fragment... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 69..274
e-value: 1.4E-6
score: 29.5
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 282..530
e-value: 5.7E-9
score: 37.6
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 104..416
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 62..274
coord: 371..531
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 62..274
coord: 371..531
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 254..456
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 254..456

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_169contigContig_169:82669..87519 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178423mRNA_17003Tribonema minus UTEX_B_3156 mRNAContig_169 82669..87519 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|178423|e_gw1.169.60.1 ID=Trimin1|178423|e_gw1.169.60.1|Name=jgi.p|Trimin1|178423|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=532bp
MTSWWRLKKQLQESNAAHTRRAVAREELFLSVLPRAAAGSQICEFAAGIG
SVPLLERVRAQAPPFEWSNETSVAAAGGGHLGVLKWLRNQDPPCSWNAEA
CEAAVSSGHLDVLRWMRSQPLPCPWDAMSSRLATVAAFEGHLDALQYLHQ
EGCAWDESTTAAAAAGDHLHVLQWCRAATPPCPWDTGVAYAAVESGSLQV
VQWLLPELLRQGVGCLIPGSLLSRAANAGHLAMLQWMAANAPAGQPLWTA
SDDAVDACTKAAAHGHLDVLRCLRGELKCPWNEEACSAAAQNGHLNVLQW
LHAGGCPWDDNTSWHAADRGDLEMFKWACSRGCPCTTTTSQLIAEQGNFE
MLRWAHENGCPWDATTCTTLAANGHLDMLKWAHTNGCPFAKKHETCSAAA
LNGELEILQWLHEQDCPWDASTTAAALKPANLKIYSWLKNNGCPAAAATA
AAAARHGLIDILMELHVLQGKKNSGVKRKCISLLAMNAAAAGGQLATVQW
LRSLTPPCPWSVMTCVNAARSGNYELLRWMR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf