mRNA_17004 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|178394
Unique Name	mRNA_17004
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|178394 vs. uniprot
Match: A0A835Z7E6_9STRA (Ankyrin repeat-containing domain protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7E6_9STRA)

HSP 1 Score: 514 bits (1325), Expect = 3.670e-177
Identity = 483/483 (100.00%), Postives = 483/483 (100.00%), Query Frame = 1

Query:    1 MVAWWQLQRQVEGNNAARTKRAFAREELFLSVLPRAAAGSQTCEFAASIGSAPLLERLRAQVPPFEWSTETSIAAVGGGHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATSPRLANIAAFEGHLDVLQYLREQGCAWDDSTTAAAAAGGHLHVLQWCRAAVPPXXXXXXXXXXXXXXXXXXXXXXLIPELLREGVRWLVCISLMSTAXXXXXXXXXXXXAENAPAGQPLWTASDNAADACTIAAAHGHLDVLRCLRGELRCPWNEEXXXXXXXXXXXXXXQWLHAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDSSLDCTCCYCKAQTLAMVQWLRSLAPPCPWTSMTCWKAAKSGNYELLRWMCESDPDPCPWDARVCT 1449
            MVAWWQLQRQVEGNNAARTKRAFAREELFLSVLPRAAAGSQTCEFAASIGSAPLLERLRAQVPPFEWSTETSIAAVGGGHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATSPRLANIAAFEGHLDVLQYLREQGCAWDDSTTAAAAAGGHLHVLQWCRAAVPPXXXXXXXXXXXXXXXXXXXXXXLIPELLREGVRWLVCISLMSTAXXXXXXXXXXXXAENAPAGQPLWTASDNAADACTIAAAHGHLDVLRCLRGELRCPWNEEXXXXXXXXXXXXXXQWLHAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDSSLDCTCCYCKAQTLAMVQWLRSLAPPCPWTSMTCWKAAKSGNYELLRWMCESDPDPCPWDARVCT
Sbjct:    1 MVAWWQLQRQVEGNNAARTKRAFAREELFLSVLPRAAAGSQTCEFAASIGSAPLLERLRAQVPPFEWSTETSIAAVGGGHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATSPRLANIAAFEGHLDVLQYLREQGCAWDDSTTAAAAAGGHLHVLQWCRAAVPPXXXXXXXXXXXXXXXXXXXXXXLIPELLREGVRWLVCISLMSTAXXXXXXXXXXXXAENAPAGQPLWTASDNAADACTIAAAHGHLDVLRCLRGELRCPWNEEXXXXXXXXXXXXXXQWLHAGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSDSSLDCTCCYCKAQTLAMVQWLRSLAPPCPWTSMTCWKAAKSGNYELLRWMCESDPDPCPWDARVCT 483

[Close]

BLAST of jgi.p|Trimin1|178394 vs. uniprot
Match: A0A835Z6S9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6S9_9STRA)

HSP 1 Score: 298 bits (764), Expect = 5.070e-92
Identity = 241/305 (79.02%), Postives = 261/305 (85.57%), Query Frame = 1

Query:    1 MVAWWQLQRQVEGNNAARTKRAFAREELFLSVLPRAAAGSQTCEFAASIGSAPLLERLRAQVPPFEWSTETSIAAVGGGHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDATSPRLANIAAFEGHLDVLQYLREQGCAWDDSTTAAAAAGGHLHVLQWCRAAVPPXXXXXXXXXXXXXXXXXXXXXXLIPELLREGVRWLVCISLMSTAXXXXXXXXXXXXAENAPAGQPLWTASDNAADACTIAAAHGHLDVLRCLRGELRCPWNEEXXXXXXXXXXXXXXQWLHAGG 915
            M +WW+L++Q++ +NAA T+RA AREELFLSVLPRAAAGSQ CEFAA IGS PLLER+RAQ PPFEWS ETS+AA      XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   S RLA +AAFEGHLD LQYL ++GCAWD+STTAAAAAG HLHVLQWCRAA PPXXXXXXXXXXXXXXXXXXXXXXL+PELLR+GV  L+  SL+S A            A NAPAGQPLWTASD+A DACT AAAHGHLDVLRCLRGEL+CPWNEEXXXXXXXXXXXXXXQWLHAGG
Sbjct:    1 MTSWWRLKKQLQESNAAHTRRAVAREELFLSVLPRAAAGSQICEFAAGIGSVPLLERVRAQAPPFEWSNETSVAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMSSRLATVAAFEGHLDALQYLHQEGCAWDESTTAAAAAGDHLHVLQWCRAATPPXXXXXXXXXXXXXXXXXXXXXXLLPELLRQGVGCLIPGSLLSRAANAGHLAMLQWMAANAPAGQPLWTASDDAVDACTKAAAHGHLDVLRCLRGELKCPWNEEXXXXXXXXXXXXXXQWLHAGG 305

[Close]

BLAST of jgi.p|Trimin1|178394 vs. uniprot
Match: A0A7S1VGX5_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Sexangularia sp. CB-2014 TaxID=1486929 RepID=A0A7S1VGX5_9EUKA)

HSP 1 Score: 53.5 bits (127), Expect = 3.980e-5
Identity = 24/46 (52.17%), Postives = 31/46 (67.39%), Query Frame = 1

Query:  385 SPRLANIAAFEGHLDVLQYLREQGCAWDDSTTAAAAAGGHLHVLQW 522
            SP L   AA  G +D L++LRE+GCAWD+S   AA A G L +L+W
Sbjct:   82 SPTLCAGAAQAGAIDCLEWLRERGCAWDESVVTAAVAAGDLPLLRW 127

[Close]

BLAST of jgi.p|Trimin1|178394 vs. uniprot
Match: A0A6H5KEA5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEA5_9PHAE)

HSP 1 Score: 56.2 bits (134), Expect = 4.540e-5
Identity = 24/38 (63.16%), Postives = 26/38 (68.42%), Query Frame = 1

Query:  418 GHLDVLQYLREQGCAWDDSTTAAAAAGGHLHVLQWCRA 531
            G+LD+L   R  GC W   T AAAA GGHLHVLQW RA
Sbjct:   29 GNLDLLAAARRSGCPWSHRTAAAAAEGGHLHVLQWARA 66

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|178394 vs. uniprot

BLAST of jgi.p|Trimin1|178394 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A835Z7E6_9STRA	3.670e-177	100.00	Ankyrin repeat-containing domain protein (Fragment...	[more]
A0A835Z6S9_9STRA	5.070e-92	79.02	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S1VGX5_9EUKA	3.980e-5	52.17	Hypothetical protein (Fragment) n=1 Tax=Sexangular...	[more]
A0A6H5KEA5_9PHAE	4.540e-5	63.16	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_169	contig	Contig_169:88999..93116 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|178394\|e_gw1.169.44.1
Hectar predicted targeting category	other localisation
TranscriptId	178716
Track	FilteredModels1
ProteinId	178394

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|178394	gene_17004	Tribonema minus UTEX_B_3156	gene	Contig_169 88999..93116 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_17004_1	exon_17004_1	Tribonema minus UTEX_B_3156	exon	Contig_169 88999..89268 +
exon_17004_2	exon_17004_2	Tribonema minus UTEX_B_3156	exon	Contig_169 90955..91388 +
exon_17004_3	exon_17004_3	Tribonema minus UTEX_B_3156	exon	Contig_169 91500..92088 +
exon_17004_4	exon_17004_4	Tribonema minus UTEX_B_3156	exon	Contig_169 92961..93116 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_17004	CDS_17004	Tribonema minus UTEX_B_3156	CDS	Contig_169 88999..89268 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|178394	Trimin1\|178394\|e_gw1.169.44.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_169 88999..93116 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_169:88999..93116+
coding sequence from alignment at Contig_169:88999..93116+

spliced messenger RNA

>mRNA_17004 ID=mRNA_17004|Name=jgi.p|Trimin1|178394|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1449bp|location=Sequence derived from alignment at Contig_169:88999..93116+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGTGGCCTGGTGGCAGCTTCAAAGGCAGGTCGAGGGAAACAACGCAGC
GCGTACGAAGCGTGCTTTCGCAAGGGAGGAGCTCTTTCTCTCAGTTCTCC
CCAGGGCCGCCGCCGGCAGCCAGACCTGCGAATTCGCTGCAAGCATTGGC
TCAGCGCCGCTGCTTGAGCGCCTCAGGGCTCAGGTCCCCCCGTTTGAGTG
GAGTACGGAGACAAGCATCGCTGCTGTGGGTGGGGGCCATCTCAGCGTGT
TGAAGTGGCTACGCAACCAGGACCCGCCCTGCAGCTGGAACGATGAAGCA
TGCGAAGGGGCCGTAAGCGGTGGCCACCACGATGTCCTCCGCTGGATGCG
CTCTCAGCCATCGCCGTGTCCCTGGGATGCGACATCACCCAGGCTGGCCA
ACATTGCAGCTTTCGAAGGGCATCTGGACGTGCTGCAGTACCTGCGCGAG
CAGGGCTGCGCCTGGGACGATAGTACAACCGCTGCGGCGGCGGCGGGCGG
CCATCTGCACGTCCTGCAGTGGTGCCGCGCCGCAGTGCCGCCGTGTTCCT
GGGACATAGACGTCGCCGAAGCAGCTGTTAAGAGTGGCAACCTGACCCTG
GTGCAGTGGCTAATCCCAGAGCTCCTGCGGGAAGGCGTGAGGTGGCTCGT
ATGCATCTCGCTGATGTCCACCGCTGCGAGAGCCGGACACCTGACAGTGC
TGCAGTGGCTGGCGGAGAACGCTCCGGCCGGCCAGCCGCTGTGGACCGCG
AGCGACAACGCAGCGGACGCGTGCACGATAGCGGCGGCGCACGGGCACCT
GGACGTCCTGCGCTGCCTGCGCGGGGAGCTCAGGTGCCCGTGGAACGAGG
AGGCCTGCTCCGCCGCGGCGCAGAACGGCCATCTCGACGTGCTCCAGTGG
CTCCATGCCGGCGGCTGCCCGTGGGACAAGCACACAAGCTACTACGCGGC
GAAGCGCGGCGATCTCGATATGTTCCAGTGGGCGTGCAGCCGCGGGTGCC
CGTGGAGCAAGATCACGAGTCGGGTCGCAGCAGAGCAGGGCCATTTCGAG
ATGCTCCAGTGGGCACATGAGAATGGGTGCCCCTGGGACACAGCCACGTG
CACCGCTCTCGCCGCAAATGGACGCCTGGACATGCTCCAGTGGGCGCACG
CGAATGGCTGCCCCTTCAATGAGAGCACATGCAGCGCAGCGGCGTTGAAC
GGCAAGTTCGACACCCTGCAGTGGCTTCATGAGCAGGTATGCAAAAGCGA
CTCTAGCCTTGACTGCACATGCTGCTATTGCAAAGCTCAAACGCTCGCAA
TGGTGCAGTGGCTGCGCAGCCTCGCCCCGCCGTGTCCGTGGACGTCAATG
ACATGCTGGAAAGCCGCGAAGAGCGGCAACTATGAGCTGCTGCGGTGGAT
GTGCGAGTCGGACCCCGACCCCTGTCCCTGGGATGCGCGCGTCTGTACC

protein sequence of jgi.p|Trimin1|178394

>Trimin1|178394|e_gw1.169.44.1 ID=Trimin1|178394|e_gw1.169.44.1|Name=jgi.p|Trimin1|178394|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=483bp
MVAWWQLQRQVEGNNAARTKRAFAREELFLSVLPRAAAGSQTCEFAASIG
SAPLLERLRAQVPPFEWSTETSIAAVGGGHLSVLKWLRNQDPPCSWNDEA
CEGAVSGGHHDVLRWMRSQPSPCPWDATSPRLANIAAFEGHLDVLQYLRE
QGCAWDDSTTAAAAAGGHLHVLQWCRAAVPPCSWDIDVAEAAVKSGNLTL
VQWLIPELLREGVRWLVCISLMSTAARAGHLTVLQWLAENAPAGQPLWTA
SDNAADACTIAAAHGHLDVLRCLRGELRCPWNEEACSAAAQNGHLDVLQW
LHAGGCPWDKHTSYYAAKRGDLDMFQWACSRGCPWSKITSRVAAEQGHFE
MLQWAHENGCPWDTATCTALAANGRLDMLQWAHANGCPFNESTCSAAALN
GKFDTLQWLHEQVCKSDSSLDCTCCYCKAQTLAMVQWLRSLAPPCPWTSM
TCWKAAKSGNYELLRWMCESDPDPCPWDARVCT

mRNA from alignment at Contig_169:88999..93116+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_17004 ID=mRNA_17004|Name=jgi.p|Trimin1|178394|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=4118bp|location=Sequence derived from alignment at Contig_169:88999..93116+ (Tribonema minus UTEX_B_3156 )
ATGGTGGCCTGGTGGCAGCTTCAAAGGCAGGTCGAGGGAAACAACGCAGC
GCGTACGAAGCGTGCTTTCGCAAGGGAGGAGCTCTTTCTCTCAGTTCTCC
CCAGGGCCGCCGCCGGCAGCCAGACCTGCGAATTCGCTGCAAGCATTGGC
TCAGCGCCGCTGCTTGAGCGCCTCAGGGCTCAGGTCCCCCCGTTTGAGTG
GAGTACGGAGACAAGCATCGCTGCTGTGGGTGGGGGCCATCTCAGCGTGT
TGAAGTGGCTACGCAACCAGGTACGCAGCATACCGAGCCTCTTGGCGTGA
GGGTTTTCACATCAATCGTCAGGGTGACAGCCGTATTCGCTCGCACAGAC
AACGATCGATTCACATGGTCGTCAGCAACTGCTTAAAAAAACATCAGTCT
GCAGTGTAGGCTGATGAAGGTGCAAGTCGACAAAGCGCAAATAGCCATGC
GTTTGTCTGCTCCTTCACGCGCTTGTAATGCACTTCAAGGCCAAAGAGGG
TATGTCATTATACTGAAATAGCAGACCTGCAACAAATAGTTGATTGACTG
TTTTACGCTACCAACATTTTTTCCCCTTGTTCCCTACATGATGCCAGTTT
TCAGGGTGGCAACTCTAAGAAACTCTTGAGCAAGTTATTTCTGTTCAGCA
TGTCCACAAATAGACGTGCATGTTGGAAATGGTGCATATATGTATGTGTT
ATGTTGTAATGTCCATTGCCGTCGTGACCTGCCATTTTAAGGCAACTGGC
CCTCCACGTTTATTGAACCCTTTCTGGTGGGCAACGTATTCGACTTAGAG
ACCCTGATCGATCGAAAATGACTCGAACGTTCGATGTGTTCGTTCGGTTC
GAAAGTTCGTTCGAAATTCCCGGTTCGTTCGCGATCTCGAACAGTCGACC
ACAATCATGTCCGAACATGCTCGAACATTGCGTTCGAACGTGTTCGAACA
CATTCGGACATGTTCGAGCACACTCGAATAATGCGTTCGTAATGTTCGGA
CATGTTCGAACGCATCGAACATCGTGGTTGAAGTTGCCGTTGCAGTTGGT
CCAAAAGGTGCACGTGCTGCGATCATGGCCGCTGGGGGCTTGTTGCGATA
CAGCAGTGTATATACCACCATGCTATACTTCAGCGCGGCACGTGATCTCT
GCGAAGTAGCCACATCACTCACGGACATGTGTACACGAACCAGCAAAAGC
ACCAACATCGCTTTGTCCGTGTGCACCACGGTCGGCAGCAGCAACAGCGA
AAGCTGGTGACGACGCAGCTGGTTGCCTCGTGAAGCAGTGCTGAAGCGCG
TGCAGTGCTCGTTGTGCTACACGAAAGAACAGAACAACAGGTTTATCTTC
ACTTGCAAGCAGAGAGGAGCCAGGGCCAGAAGTGAACATAGATCTGGCTT
CTCTTTGCACAGCACTCATTTACTTGCAGGGACTGATGTTGCAGTGTGTC
TGGGTTATGTGTGGGTGTTTTGGCAGATAATTGGTGAATACTTAGTTCGA
ACATGTTCGGACGTTCGATCGAAATTTTTTGTTCGTTCGAAAAGTGTTCG
GACAGTTTCAATCAGGGTCTCTAATTCGACTATGTGGAAAGGGTGCAATG
CACTAACGTCCTACTTCGTGTTATGAGGTGTGGCGAACTTCAAGAGTCCT
CCAGACGCCTTCAGCGCGCACTCAGTCTGCAACTTCACTATCAACCACTG
CTGACGGCTAGTTTGGCACCTGCTCGCACTTTAAATTTCCCTGTGTATTA
AGACGCAGAGATAACCTGCAGTCTGCATTTATGTGTTTGTGTTCATGAAC
TATTACCACCCCGATTGCTCTGCAGCAGCACCATGCCACATGCTGCTTTT
CCAAAGTATAGAAATGGTCGACCCAGCAGACATGCCTGTCAAGACGTAGC
TTGCTACACTCGCTCCTGCTCATCCTCAGTCTCTCCATACAACGATGCCC
TTGCAGGACCCGCCCTGCAGCTGGAACGATGAAGCATGCGAAGGGGCCGT
AAGCGGTGGCCACCACGATGTCCTCCGCTGGATGCGCTCTCAGCCATCGC
CGTGTCCCTGGGATGCGACATCACCCAGGCTGGCCAACATTGCAGCTTTC
GAAGGGCATCTGGACGTGCTGCAGTACCTGCGCGAGCAGGGCTGCGCCTG
GGACGATAGTACAACCGCTGCGGCGGCGGCGGGCGGCCATCTGCACGTCC
TGCAGTGGTGCCGCGCCGCAGTGCCGCCGTGTTCCTGGGACATAGACGTC
GCCGAAGCAGCTGTTAAGAGTGGCAACCTGACCCTGGTGCAGTGGCTAAT
CCCAGAGCTCCTGCGGGAAGGCGTGAGGTGGCTCGTATGCATCTCGCTGA
TGTCCACCGCTGCGAGAGCCGGACACCTGACAGTGCTGCAGTTCCTGCAC
GCCATGCCGGACTATCCCGACCGAGAGGACGCCTTGAAGAGCCTGTTCAG
CGTCCATACGCACATTGTGGTGGCGCGCGGGGGTCATGTGGCAGTGCTCA
GGTGGCTGGCGGAGAACGCTCCGGCCGGCCAGCCGCTGTGGACCGCGAGC
GACAACGCAGCGGACGCGTGCACGATAGCGGCGGCGCACGGGCACCTGGA
CGTCCTGCGCTGCCTGCGCGGGGAGCTCAGGTGCCCGTGGAACGAGGAGG
CCTGCTCCGCCGCGGCGCAGAACGGCCATCTCGACGTGCTCCAGTGGCTC
CATGCCGGCGGCTGCCCGTGGGACAAGCACACAAGCTACTACGCGGCGAA
GCGCGGCGATCTCGATATGTTCCAGTGGGCGTGCAGCCGCGGGTGCCCGT
GGAGCAAGATCACGAGTCGGGTCGCAGCAGAGCAGGGCCATTTCGAGATG
CTCCAGTGGGCACATGAGAATGGGTGCCCCTGGGACACAGCCACGTGCAC
CGCTCTCGCCGCAAATGGACGCCTGGACATGCTCCAGTGGGCGCACGCGA
ATGGCTGCCCCTTCAATGAGAGCACATGCAGCGCAGCGGCGTTGAACGGC
AAGTTCGACACCCTGCAGTGGCTTCATGAGCAGGTATGCAAAAGCGACTC
TAGCCTTGACTGCACATGCTGCTATTGCAAAGCTCAAACGGTTGCAGAAT
GAGTCTTTCACTGGTTGCTGGCTCTGCAGACTGAGCGTCACCCTGTCACG
GTCGTCCTTTCTTATGGTTGGTAGGTTGCAACGTTAACCACGCACTCACT
CTTCTGGCAGCCTGAGCCAGACAATTCACTGGGTGTTCAAATTACAATAC
ATTAGAGCCGCAATTGTTATAGCTTCCAGTTGTTGGCATTGGTTTTACCA
TGATGCATGGACATTGCAGCATGTTTTCATACAGCACACCACCCTATTTG
CCACATATGATGTGTCGAACAGCAACTGGTTTGACTTTGTTGTTGTTGTT
TGCCCAGTGATGCATACCACACCTTGCAGCCATTGCTTTGCATTTCCAGT
GGAGAATGTCGAGCCAAACGCGGCGCCTGGTTGCTCTACACAAGTATGCG
CCTTCAAATTACGTTGGCCTTCAGGGCCCACACCTAGTCGATATTTTCAT
GTCCATCCTTACCATTGAAGGCCGCTGCCGCAGCGGTGCATTCGTGGTCG
CAAACCCCCTTATGCCATGCCCTATATTCTGCAGTACTGATGCCAATCAC
ATACATGCATGAAAGGTACTCAGATGACGGCACCAATACCCAAAAACCTT
GAACCTGTCCTCTCAGGCTTGCCCATGGGACGCCAGCGCCACCACTTCAG
CCCTCCAGCCTCGTGCCTCCAACCTGCACATCTACCGCTGGCTCAGAGAC
CCCGGACGCCCTGCGGCAGCCGCCACCGCAGCGGCGGCCGCACGGCACGG
CCTCACCGACGTCCTCAAGGACCTGCATGAGCTGCAGGGGAAGGAAAATT
CCAGCGTGACGGGCGAGTGCATCGGTCTGCTCGCCATGAACGCCGCCGCC
GCCGGCGGGCAGCTCGCAATGGTGCAGTGGCTGCGCAGCCTCGCCCCGCC
GTGTCCGTGGACGTCAATGACATGCTGGAAAGCCGCGAAGAGCGGCAACT
ATGAGCTGCTGCGGTGGATGTGCGAGTCGGACCCCGACCCCTGTCCCTGG
GATGCGCGCGTCTGTACC

Coding sequence (CDS) from alignment at Contig_169:88999..93116+

>mRNA_17004 ID=mRNA_17004|Name=jgi.p|Trimin1|178394|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1449bp|location=Sequence derived from alignment at Contig_169:88999..93116+ (Tribonema minus UTEX_B_3156 )
ATGGTGGCCTGGTGGCAGCTTCAAAGGCAGGTCGAGGGAAACAACGCAGC
GCGTACGAAGCGTGCTTTCGCAAGGGAGGAGCTCTTTCTCTCAGTTCTCC
CCAGGGCCGCCGCCGGCAGCCAGACCTGCGAATTCGCTGCAAGCATTGGC
TCAGCGCCGCTGCTTGAGCGCCTCAGGGCTCAGGTCCCCCCGTTTGAGTG
GAGTACGGAGACAAGCATCGCTGCTGTGGGTGGGGGCCATCTCAGCGTGT
TGAAGTGGCTACGCAACCAGGACCCGCCCTGCAGCTGGAACGATGAAGCA
TGCGAAGGGGCCGTAAGCGGTGGCCACCACGATGTCCTCCGCTGGATGCG
CTCTCAGCCATCGCCGTGTCCCTGGGATGCGACATCACCCAGGCTGGCCA
ACATTGCAGCTTTCGAAGGGCATCTGGACGTGCTGCAGTACCTGCGCGAG
CAGGGCTGCGCCTGGGACGATAGTACAACCGCTGCGGCGGCGGCGGGCGG
CCATCTGCACGTCCTGCAGTGGTGCCGCGCCGCAGTGCCGCCGTGTTCCT
GGGACATAGACGTCGCCGAAGCAGCTGTTAAGAGTGGCAACCTGACCCTG
GTGCAGTGGCTAATCCCAGAGCTCCTGCGGGAAGGCGTGAGGTGGCTCGT
ATGCATCTCGCTGATGTCCACCGCTGCGAGAGCCGGACACCTGACAGTGC
TGCAGTGGCTGGCGGAGAACGCTCCGGCCGGCCAGCCGCTGTGGACCGCG
AGCGACAACGCAGCGGACGCGTGCACGATAGCGGCGGCGCACGGGCACCT
GGACGTCCTGCGCTGCCTGCGCGGGGAGCTCAGGTGCCCGTGGAACGAGG
AGGCCTGCTCCGCCGCGGCGCAGAACGGCCATCTCGACGTGCTCCAGTGG
CTCCATGCCGGCGGCTGCCCGTGGGACAAGCACACAAGCTACTACGCGGC
GAAGCGCGGCGATCTCGATATGTTCCAGTGGGCGTGCAGCCGCGGGTGCC
CGTGGAGCAAGATCACGAGTCGGGTCGCAGCAGAGCAGGGCCATTTCGAG
ATGCTCCAGTGGGCACATGAGAATGGGTGCCCCTGGGACACAGCCACGTG
CACCGCTCTCGCCGCAAATGGACGCCTGGACATGCTCCAGTGGGCGCACG
CGAATGGCTGCCCCTTCAATGAGAGCACATGCAGCGCAGCGGCGTTGAAC
GGCAAGTTCGACACCCTGCAGTGGCTTCATGAGCAGGTATGCAAAAGCGA
CTCTAGCCTTGACTGCACATGCTGCTATTGCAAAGCTCAAACGCTCGCAA
TGGTGCAGTGGCTGCGCAGCCTCGCCCCGCCGTGTCCGTGGACGTCAATG
ACATGCTGGAAAGCCGCGAAGAGCGGCAACTATGAGCTGCTGCGGTGGAT
GTGCGAGTCGGACCCCGACCCCTGTCCCTGGGATGCGCGCGTCTGTACC