Trimin1|178390|e_gw1.169.56.1 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|178390
Unique NameTrimin1|178390|e_gw1.169.56.1
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length294
Homology
BLAST of jgi.p|Trimin1|178390 vs. uniprot
Match: A0A835Z6E3_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6E3_9STRA)

HSP 1 Score: 576 bits (1484), Expect = 1.740e-207
Identity = 293/293 (100.00%), Postives = 293/293 (100.00%), Query Frame = 0
Query:    1 MPQNFLRWRGTHAPDNPNLTEKFQCTTSTLPCAAKIEGNETQVLTVELQRGQRLRAEAGNLIYMTEGVVMDTSTGGGVGKALSRVITGQSVMVTDFFLEPTSRRTSSGHDSRVGQVCLGTSMPAKILRLPLADFGGSVVCQRGAFLAGSDTIDISTEVTRPMAGLFGGEGFVLQRLSGEGDAFVSACGHVMRRDLKSGEVLRVTAGSLVCFSSTVDYGVTTAGGLKNIVFGTDGVFLATLTGPGTVYLQGMPFDRLVRAIGKALPQNASGMPVPPIIIPGMGGGDSGNAPPGT 293
            MPQNFLRWRGTHAPDNPNLTEKFQCTTSTLPCAAKIEGNETQVLTVELQRGQRLRAEAGNLIYMTEGVVMDTSTGGGVGKALSRVITGQSVMVTDFFLEPTSRRTSSGHDSRVGQVCLGTSMPAKILRLPLADFGGSVVCQRGAFLAGSDTIDISTEVTRPMAGLFGGEGFVLQRLSGEGDAFVSACGHVMRRDLKSGEVLRVTAGSLVCFSSTVDYGVTTAGGLKNIVFGTDGVFLATLTGPGTVYLQGMPFDRLVRAIGKALPQNASGMPVPPIIIPGMGGGDSGNAPPGT
Sbjct:    1 MPQNFLRWRGTHAPDNPNLTEKFQCTTSTLPCAAKIEGNETQVLTVELQRGQRLRAEAGNLIYMTEGVVMDTSTGGGVGKALSRVITGQSVMVTDFFLEPTSRRTSSGHDSRVGQVCLGTSMPAKILRLPLADFGGSVVCQRGAFLAGSDTIDISTEVTRPMAGLFGGEGFVLQRLSGEGDAFVSACGHVMRRDLKSGEVLRVTAGSLVCFSSTVDYGVTTAGGLKNIVFGTDGVFLATLTGPGTVYLQGMPFDRLVRAIGKALPQNASGMPVPPIIIPGMGGGDSGNAPPGT 293          
BLAST of jgi.p|Trimin1|178390 vs. uniprot
Match: D7G1U0_ECTSI (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1U0_ECTSI)

HSP 1 Score: 259 bits (663), Expect = 3.470e-81
Identity = 134/238 (56.30%), Postives = 178/238 (74.79%), Query Frame = 0
Query:   33 AAKIEGNETQVLTVELQRGQRLRAEAGNLIYMTEGVVMDTSTGGGVGKALSRVITGQSVMVTDFFLEPTSRRTSSGHDSRVGQVCLGTSMPAKILRLPLADFGGSVVCQRGAFLAGSDTIDISTEVTRPMAGLFGGEGFVLQRLSGEGDAFVSACGHVMRRDLKSGEVLRVTAGSLVCFSSTVDYGVTTAGGLKNIVFGTDGVFLATLTGPGTVYLQGMPFDRLVRAIGKALPQNASG 270
            A+K+EG E+Q++T EL+ GQ +RAEAGNL++M +G+ MDT+TGGG      RVITGQ++ VTD+     +R  +SG      +V LGT +P+KI+RLPLA +GG V+CQRGAFLAGS TIDI TE T+ MAG FGGEGFVLQRL+G+GDAFV A G +++R+L  GE LRV++GS+V FS++V Y V T  G KN+VFG +G+F+  L GPGTV+LQG+PFDR+V  I + +P    G
Sbjct:    2 ASKVEGQESQMVTFELEPGQVIRAEAGNLVFMEDGIEMDTNTGGGASSMFRRVITGQNMFVTDYV----NRGDASG------KVGLGTDVPSKIVRLPLAAYGGEVICQRGAFLAGSHTIDIQTEFTKMMAGFFGGEGFVLQRLTGKGDAFVKASGPLIQRELSEGETLRVSSGSVVAFSTSVQYDVQTIPGFKNVVFGGEGLFITKLAGPGTVFLQGLPFDRMVDQIARRIPGGRGG 229          
BLAST of jgi.p|Trimin1|178390 vs. uniprot
Match: A0A7S2GIV3_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GIV3_9STRA)

HSP 1 Score: 241 bits (615), Expect = 3.870e-75
Identity = 132/253 (52.17%), Postives = 177/253 (69.96%), Query Frame = 0
Query:   33 AAKIEGNETQVLTVELQRGQRLRAEAGNLIYMTEGVVMDTSTGGGVGKALSRVITGQSVMVTDFFLEPTSRRTSSGHDSRVGQVCLGTSMPAKILRLPLADFGGSVVCQRGAFLAGSDTIDISTEVTRPMA-GLFGGEGFVLQRLSGEGDAFVSACGHVMRRDLKSGEVLRVTAGSLVCFSSTVDYGVTTAGGLKNIVFGTDGVFLATLTGPGTVYLQGMPFDRLVRAIGKALPQNASGMPVPPIIIPGMGGG 284
            A ++EG + Q++ VEL  GQ LRAE+GNLIYMTEGV M+T   GGV    +R+++G ++ +++F        T SG     G V LGT +P+KILR+ L ++GG ++CQ+GAFLAGSD I+I    T+    G FGGEGFVLQ+LSGEGDA+V A G ++ + L+ GE LRVTAGSLV F +++DY V    G+KN+VFG +G+F+ TLTGPGTVYLQGM FDR+V  I + +P+   GMP   I + GMGGG
Sbjct:   72 AGRVEGGDAQIVHVELLPGQTLRAESGNLIYMTEGVEMETVALGGVSSGFARLLSGGTMFLSNF------EYTGSGS----GTVALGTDVPSKILRMHLPNYGGEIICQKGAFLAGSDDINIEMAFTKSFTTGFFGGEGFVLQKLSGEGDAYVKATGALVTKQLEEGETLRVTAGSLVAFEASIDYDVQMMKGMKNVVFGGEGLFITTLTGPGTVYLQGMQFDRMVDQIARRIPRGG-GMP---IFMGGMGGG 310          
BLAST of jgi.p|Trimin1|178390 vs. uniprot
Match: A0A1W0A5V3_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A5V3_9STRA)

HSP 1 Score: 245 bits (626), Expect = 4.230e-75
Identity = 130/257 (50.58%), Postives = 181/257 (70.43%), Query Frame = 0
Query:   33 AAKIEGNETQVLTVELQRGQRLRAEAGNLIYMTEGVVMDTSTGGGVGKALSRVITGQSVMVTDFFLEPTSRRTSSGHDSRVGQVCLGTSMPAKILRLPLADFGGSVVCQRGAFLAGSDTIDISTEVTRPM-AGLFGGEGFVLQRLSGEGDAFVSACGHVMRRDLKSGEVLRVTAGSLVCFSSTVDYGVTTAGGLKNIVFGTDGVFLATLTGPGTVYLQGMPFDRLVRAIGKALPQNASGMPVPPIIIP-GMGGGDSG 287
            AA+IEG ETQ++ +++   Q+LR+E+G +IYMT+G+ MDT T GG+ + L+R++TGQ+  VT++        T  G D+  G V +GTS+P+KIL +PL  +GGS++CQ+GAFL GS TI I  E T+   AG FGGEGFVLQRL+G GDAF+SA G ++ R LK GEV R+++G LV F  +V + +T+  G+KN++F   G+F+ TLTGPG VYLQG+PFDR+V  I   +P    G P   II+P G+GGG SG
Sbjct:  107 AARIEGTETQIVHIDIGPNQKLRSESGAMIYMTDGIEMDTHTAGGISQGLTRMMTGQNFFVTEY--------TYKGTDT--GTVAMGTSVPSKILHMPLEKYGGSLICQKGAFLCGSHTISIEMEFTKNFGAGFFGGEGFVLQRLNGPGDAFISANGALIERTLKEGEVFRISSGCLVAFEPSVHFDITSVSGVKNVLFSGTGLFVTTLTGPGRVYLQGLPFDRMVGEIASRIPGGRGGSP---IIMPMGLGGGSSG 350          
BLAST of jgi.p|Trimin1|178390 vs. uniprot
Match: A0A7S2WLF3_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2WLF3_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.130e-74
Identity = 128/257 (49.81%), Postives = 178/257 (69.26%), Query Frame = 0
Query:   33 AAKIEGNETQVLTVELQRGQRLRAEAGNLIYMTEGVVMDTSTGGGVGKALSRVITGQSVMVTDFFLEPTSRRTSSGHDSRVGQVCLGTSMPAKILRLPLADFGGSVVCQRGAFLAGSDTIDISTEVTRPMA-GLFGGEGFVLQRLSGEGDAFVSACGHVMRRDLKSGEVLRVTAGSLVCFSSTVDYGVTTAGGLKNIVFGTDGVFLATLTGPGTVYLQGMPFDRLVRAIGKALPQNAS-GMPVPPIIIPGMGGGDSG 287
            A++IEG+++Q++TV L+ GQ LRAE+G ++YMT+GV M+TSTGGGVG    R +TGQ+V ++D+        T  G   R G V LGT  P+KI+RL L ++ G +VCQ+GA L  S T+DI TE T+  + G FGGEGFVLQ L GEGD FV A G +++++L  GE LR+++GSLV FS TV+Y +    G KN++FG +G+F+ TLTGPGT++LQGMP  R++  I + +P     G+ +P   IPGMG G SG
Sbjct:   54 ASRIEGSDSQIVTVRLEPGQVLRAESGGMMYMTDGVEMNTSTGGGVGAGFKRFLTGQNVFISDY--------TYKG--DRFGIVALGTDFPSKIMRLSLPEWDGKIVCQKGALLCASHTVDIETEFTKKFSTGFFGGEGFVLQALLGEGDVFVKAGGSIIKKELNPGEQLRISSGSLVAFSQTVEYDIQMMPGFKNVLFGGEGLFVTTLTGPGTIWLQGMPPQRMISEIARRVPSGGGLGLAIP---IPGMGSGGSG 297          
BLAST of jgi.p|Trimin1|178390 vs. uniprot
Match: A0A7S3PYP5_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial (Fragment) n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PYP5_9STRA)

HSP 1 Score: 235 bits (600), Expect = 1.020e-72
Identity = 126/253 (49.80%), Postives = 177/253 (69.96%), Query Frame = 0
Query:   34 AKIEGNETQVLTVELQRGQRLRAEAGNLIYMTEGVVMDTSTGGGVGKALSRVITGQSVMVTDFFLEPTSRRTSSGHDSRVGQVCLGTSMPAKILRLPLADFGGSVVCQRGAFLAGSDTIDISTEVTRPMA-GLFGGEGFVLQRLSGEGDAFVSACGHVMRRDLKSGEVLRVTAGSLVCFSSTVDYGVTTAGGLKNIVFGTDGVFLATLTGPGTVYLQGMPFDRLVRAIGKALPQNAS-GMPVPPIIIPGMGGG 284
            +KIEGNE+Q++TV L+ GQ LRAE+G ++YMT+GV M+T+TGGG+     R++TGQ+V ++D+        + +G D+  G VCLGTS PAKILRL + ++GG +VCQ+GA L  S T+DI  E T+  + G FGGEGFVLQ L+GEGD FV+A G +++R+L+ GE LR+++G LV F+  VDY V    G KN++FG +G+F+ TL GPG V+LQG P  R++  I + +P     G+ VP   I GMGGG
Sbjct:   78 SKIEGNESQIVTVALEPGQVLRAESGAMMYMTDGVEMNTTTGGGMSAGFQRMLTGQNVFISDY--------SYNGPDNTKGMVCLGTSFPAKILRLNVDEYGGKIVCQKGALLCASHTVDIQMEFTKKFSTGFFGGEGFVLQALTGEGDVFVTAGGTLIKRELEEGEELRISSGCLVGFTEGVDYDVEMIKGYKNVLFGGEGLFITTLKGPGLVWLQGQPPQRMISEIARRVPSGGGLGLAVP---IGGMGGG 319          
BLAST of jgi.p|Trimin1|178390 vs. uniprot
Match: A0A7S4QQY9_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QQY9_9STRA)

HSP 1 Score: 234 bits (598), Expect = 6.620e-72
Identity = 123/252 (48.81%), Postives = 173/252 (68.65%), Query Frame = 0
Query:   33 AAKIEGNETQVLTVELQRGQRLRAEAGNLIYMTEGVVMDTSTGGGVGKALSRVITGQSVMVTDFFLEPTSRRTSSGHDSRVGQVCLGTSMPAKILRLPLADFGGSVVCQRGAFLAGSDTIDISTEVTRPM-AGLFGGEGFVLQRLSGEGDAFVSACGHVMRRDLKSGEVLRVTAGSLVCFSSTVDYGVTTAGGLKNIVFGTDGVFLATLTGPGTVYLQGMPFDRLVRAIGKALPQNASGMPVPPIIIPGMGG 283
            A+KIEG E+Q++TV ++ GQ LRAE+G L+YMT+G+ M+T++GGG+     R++TGQ+V ++D+        T +G     G V LGT  P+KI+RL    +GG +VCQ+GA L  S TIDI  E  +   AG FGGEGFVLQ L+G+GD FV A G ++R++L++GE LR+++G LVCFS  VD+ V    G KN++FG +G+F+ TLTGPGTV+LQG P  R++  I + +P    G+ VP   IPGMGG
Sbjct:  111 ASKIEGKESQIVTVAIEPGQVLRAESGALMYMTDGIEMNTTSGGGMSAGFKRLLTGQNVFISDY--------TYTGESGTRGLVALGTDFPSKIIRLNPNQYGGKIVCQKGALLCASHTIDIEMEFAKKFTAGFFGGEGFVLQALTGDGDVFVKAGGTMIRKELEAGEQLRISSGCLVCFSQGVDFDVQMMPGFKNVLFGGEGLFVTTLTGPGTVWLQGQPPQRMISEIARRVPSGGIGLAVP---IPGMGG 351          
BLAST of jgi.p|Trimin1|178390 vs. uniprot
Match: A0A7S2FBI8_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FBI8_9STRA)

HSP 1 Score: 234 bits (596), Expect = 1.710e-71
Identity = 129/253 (50.99%), Postives = 180/253 (71.15%), Query Frame = 0
Query:   33 AAKIEGNETQVLTVELQRGQRLRAEAGNLIYMTEGVVMDTSTGGGVGKALSRVITGQSVMVTDFFLEPTSRRTSSGHDSRVGQVCLGTSMPAKILRLPLADFGGSVVCQRGAFLAGSDTIDISTEVTRPM-AGLFGGEGFVLQRLSGEGDAFVSACGHVMRRDLKSGEVLRVTAGSLVCFSSTVDYGVTTAGGLKNIVFGTDGVFLATLTGPGTVYLQGMPFDRLVRAIGKALPQNASGMPVPPIIIPGMGGG 284
            AAKIEG ++Q++TV++  GQ LRAE+GNLIYM++GV M+TS  GG+    +R + G SV +++F      R T    +   G V LGT MP+KI+++ + D+ G ++CQ+GAFLAGSDT++I    ++   AG FGGEGFVLQ+LSGEGDAFV A G ++ ++LK+GE LRVT+GS+V F  +V+Y V    G+KN+VFG +G+F+ TLTGPG VYLQGM FDR+V  I + +P +  G+ +P   I GMGGG
Sbjct:   70 AAKIEGGDSQIVTVDILPGQALRAESGNLIYMSDGVEMETSATGGMSAGFARYMAGGSVFLSNF------RYTG---EVGKGSVALGTDMPSKIMKMTVKDYEGGLMCQKGAFLAGSDTVNIEMGFSKSFTAGFFGGEGFVLQKLSGEGDAFVKATGALISKELKAGEKLRVTSGSIVAFEGSVEYDVQMMTGMKNVVFGGEGLFITTLTGPGRVYLQGMQFDRMVSEIARRIP-SGGGIFMP---IGGMGGG 309          
BLAST of jgi.p|Trimin1|178390 vs. uniprot
Match: A0A4D9D418_9STRA (Altered inheritance of mitochondria protein 24, mitochondrial n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D418_9STRA)

HSP 1 Score: 232 bits (591), Expect = 1.020e-70
Identity = 119/239 (49.79%), Postives = 169/239 (70.71%), Query Frame = 0
Query:   33 AAKIEGNETQVLTVELQRGQRLRAEAGNLIYMTEGVVMDTSTGGGVGKALSRVITGQSVMVTDFFLEPTSRRTSSGHDSRVGQVCLGTSMPAKILRLPLADFGGSVVCQRGAFLAGSDTIDISTEVTRPM-AGLFGGEGFVLQRLSGEGDAFVSACGHVMRRDLKSGEVLRVTAGSLVCFSSTVDYGVTTAGGLKNIVFGTDGVFLATLTGPGTVYLQGMPFDRLVRAIGKALPQNASG 270
            A+++EG ETQ++ V+L+ GQ LRAE G+L+YMT+GV ++TS GGG+   L R +TG+++ ++DF           G +   G V LGT  P+KI+R+ LAD+GGS++CQ+GAFL G+    +  E TR   +G FGGEGFVLQRL+G GDAF+ A G ++RR+L  GE LRVT+GSLV F+ +V Y V    G+KN++FG +G+F+ TLTGPG+V+LQ MPFDR+V +I   +P+   G
Sbjct:   31 ASRVEGAETQIVVVDLEPGQVLRAETGSLLYMTDGVELETSLGGGLSAGLKRYMTGENMFISDFKYH--------GPEGSSGTVALGTEFPSKIIRVTLADYGGSLICQKGAFLCGTHLTGMEMEFTRSFKSGFFGGEGFVLQRLTGGGDAFIKAGGALIRRELSEGETLRVTSGSLVGFAPSVQYDVEMLKGVKNVMFGGEGLFVTTLTGPGSVFLQSMPFDRVVASIASRVPRGGLG 261          
BLAST of jgi.p|Trimin1|178390 vs. uniprot
Match: B7GD59_PHATC (Altered inheritance of mitochondria protein 24, mitochondrial (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GD59_PHATC)

HSP 1 Score: 226 bits (575), Expect = 2.710e-70
Identity = 116/232 (50.00%), Postives = 160/232 (68.97%), Query Frame = 0
Query:   35 KIEGNETQVLTVELQRGQRLRAEAGNLIYMTEGVVMDTSTGGGVGKALSRVITGQSVMVTDFFLEPTSRRTSSGHDSRVGQVCLGTSMPAKILRLPLADFGGSVVCQRGAFLAGSDTIDISTEVTRPMA-GLFGGEGFVLQRLSGEGDAFVSACGHVMRRDLKSGEVLRVTAGSLVCFSSTVDYGVTTAGGLKNIVFGTDGVFLATLTGPGTVYLQGMPFDRLVRAIGKALP 265
            K+EGNE+Q+LTV L+ GQ LRAE+G ++YMT+GV M+T++GGG+     R++TGQ+  ++D+  E        G    VG V LGT  P+KI+RL L ++GG +VCQ+GA L  S T+DI  E ++ M+ G FGGEGFVLQ LSGEGD FV A G ++RRDLK GE LR+++G LV F++ VDY V    G  N+  G +G+F+ TLTGPG V+LQG P  R++  I + +P
Sbjct:    1 KVEGNESQILTVALEPGQVLRAESGAMMYMTDGVQMNTTSGGGLSSGFQRMLTGQNFFISDYSFE--------GEPGTVGHVALGTDFPSKIVRLNLEEYGGKIVCQKGALLCASHTVDIQMEYSKNMSTGFFGGEGFVLQGLSGEGDVFVKAGGTLIRRDLKEGEQLRISSGCLVAFTNGVDYDVQMVKGFANVFAGGEGLFMTTLTGPGVVWLQGQPAQRMISEIARRVP 224          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|178390 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z6E3_9STRA1.740e-207100.00Altered inheritance of mitochondria protein 24, mi... [more]
D7G1U0_ECTSI3.470e-8156.30Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S2GIV3_9STRA3.870e-7552.17Altered inheritance of mitochondria protein 24, mi... [more]
A0A1W0A5V3_9STRA4.230e-7550.58Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S2WLF3_9STRA1.130e-7449.81Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S3PYP5_9STRA1.020e-7249.80Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S4QQY9_9STRA6.620e-7248.81Altered inheritance of mitochondria protein 24, mi... [more]
A0A7S2FBI8_9STRA1.710e-7150.99Altered inheritance of mitochondria protein 24, mi... [more]
A0A4D9D418_9STRA1.020e-7049.79Altered inheritance of mitochondria protein 24, mi... [more]
B7GD59_PHATC2.710e-7050.00Altered inheritance of mitochondria protein 24, mi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002838Mitochondrial biogenesis protein AIM24TIGRFAMTIGR00266TIGR00266coord: 37..265
e-value: 4.5E-32
score: 109.4
IPR002838Mitochondrial biogenesis protein AIM24PFAMPF01987AIM24coord: 35..251
e-value: 4.4E-53
score: 180.1
IPR036983Mitochondrial biogenesis AIM24 superfamilyGENE3D3.60.160.10Mitochondrial biogenesis AIM24coord: 30..271
e-value: 8.0E-66
score: 223.6
NoneNo IPR availablePANTHERPTHR43657:SF1TRYPTOPHAN RNA-BINDING ATTENUATOR PROTEIN-LIKE PROTEINcoord: 31..268
NoneNo IPR availablePANTHERPTHR43657TRYPTOPHAN RNA-BINDING ATTENUATOR PROTEIN-LIKE PROTEINcoord: 31..268
IPR016031Tryptophan RNA-binding attenuator protein-like domain superfamilySUPERFAMILY51219TRAP-likecoord: 35..268

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_169contigContig_169:128184..131759 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178390mRNA_17009Tribonema minus UTEX_B_3156 mRNAContig_169 128184..131759 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|178390|e_gw1.169.56.1 ID=Trimin1|178390|e_gw1.169.56.1|Name=jgi.p|Trimin1|178390|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=294bp
MPQNFLRWRGTHAPDNPNLTEKFQCTTSTLPCAAKIEGNETQVLTVELQR
GQRLRAEAGNLIYMTEGVVMDTSTGGGVGKALSRVITGQSVMVTDFFLEP
TSRRTSSGHDSRVGQVCLGTSMPAKILRLPLADFGGSVVCQRGAFLAGSD
TIDISTEVTRPMAGLFGGEGFVLQRLSGEGDAFVSACGHVMRRDLKSGEV
LRVTAGSLVCFSSTVDYGVTTAGGLKNIVFGTDGVFLATLTGPGTVYLQG
MPFDRLVRAIGKALPQNASGMPVPPIIIPGMGGGDSGNAPPGT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002838AIM24
IPR036983AIM24_sf
IPR016031Trp_RNA-bd_attenuator-like_dom