Trimin1|353526|estExt_Genemark1.C_Ctg_1680022 (polypeptide) Tribonema minus UTEX_B_3156
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Overview
Homology
BLAST of jgi.p|Trimin1|353526 vs. uniprot
Match: A0A835Z6V7_9STRA (RING-type domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6V7_9STRA) HSP 1 Score: 997 bits (2578), Expect = 0.000e+0 Identity = 828/828 (100.00%), Postives = 828/828 (100.00%), Query Frame = 0
Query: 1 MAIKWHLAPSAGGDKVLLTPDQPWHYQVSGARENTLTFLARSDGTVTVSKPAAWEPAYTCTLNDRCLDDGVTALADQDSISVNFNFTHDGADDDPCHIVEQAFTVVLAEGSVPTPAHHQDQSAKRTAXXXXXRDTSGRXXXXRANSGDCTDCDPAAECSSAPQPPQVVPLLLQLPVPSVVSPSSGRQPCPSDDPCKSSGGXXXXXXXXXSDSGARGAGVTSANAAMLSEISAQAAHCASLQDVAGLVNTAVSAITRGWQQNERERVAALEAERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAADVKVAEAERACXXXXXXAQDAKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRERDSLISRAQNAEISKGILEATATTAAQRAAADAAELTRLRDDLTSIRALYTAEQQRADAAETAAAAERCIALRGAAAFSAHTLQLAADAAAARSXXXXXXXXXXXXXXXXXXXXXXEAAVGSASEELECAVCMELMVEPVAVSCGHLLCACCLRDWRRQCGDGRPPTCPTCQTDVKGSTPMKQMKNAIGHLIDSGLLPADDVANYRNRIGDTASAAPAHAAPLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPAMAHAPPVAGRGFGPPRVRGETGTVNRNCSPTRAYGGNAAPQGQFRGKAPDARCRASTALLRSAVERRXXXXXXXXXXXXXXXXXXXXXXARAGFRALLDRPTD 828
MAIKWHLAPSAGGDKVLLTPDQPWHYQVSGARENTLTFLARSDGTVTVSKPAAWEPAYTCTLNDRCLDDGVTALADQDSISVNFNFTHDGADDDPCHIVEQAFTVVLAEGSVPTPAHHQDQSAKRTAXXXXXRDTSGRXXXXRANSGDCTDCDPAAECSSAPQPPQVVPLLLQLPVPSVVSPSSGRQPCPSDDPCKSSGGXXXXXXXXXSDSGARGAGVTSANAAMLSEISAQAAHCASLQDVAGLVNTAVSAITRGWQQNERERVAALEAERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAADVKVAEAERACXXXXXXAQDAKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRERDSLISRAQNAEISKGILEATATTAAQRAAADAAELTRLRDDLTSIRALYTAEQQRADAAETAAAAERCIALRGAAAFSAHTLQLAADAAAARSXXXXXXXXXXXXXXXXXXXXXXEAAVGSASEELECAVCMELMVEPVAVSCGHLLCACCLRDWRRQCGDGRPPTCPTCQTDVKGSTPMKQMKNAIGHLIDSGLLPADDVANYRNRIGDTASAAPAHAAPLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPAMAHAPPVAGRGFGPPRVRGETGTVNRNCSPTRAYGGNAAPQGQFRGKAPDARCRASTALLRSAVERRXXXXXXXXXXXXXXXXXXXXXXARAGFRALLDRPTD
Sbjct: 1 MAIKWHLAPSAGGDKVLLTPDQPWHYQVSGARENTLTFLARSDGTVTVSKPAAWEPAYTCTLNDRCLDDGVTALADQDSISVNFNFTHDGADDDPCHIVEQAFTVVLAEGSVPTPAHHQDQSAKRTAXXXXXRDTSGRXXXXRANSGDCTDCDPAAECSSAPQPPQVVPLLLQLPVPSVVSPSSGRQPCPSDDPCKSSGGXXXXXXXXXSDSGARGAGVTSANAAMLSEISAQAAHCASLQDVAGLVNTAVSAITRGWQQNERERVAALEAERAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAAADVKVAEAERACXXXXXXAQDAKRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRERDSLISRAQNAEISKGILEATATTAAQRAAADAAELTRLRDDLTSIRALYTAEQQRADAAETAAAAERCIALRGAAAFSAHTLQLAADAAAARSXXXXXXXXXXXXXXXXXXXXXXEAAVGSASEELECAVCMELMVEPVAVSCGHLLCACCLRDWRRQCGDGRPPTCPTCQTDVKGSTPMKQMKNAIGHLIDSGLLPADDVANYRNRIGDTASAAPAHAAPLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPAMAHAPPVAGRGFGPPRVRGETGTVNRNCSPTRAYGGNAAPQGQFRGKAPDARCRASTALLRSAVERRXXXXXXXXXXXXXXXXXXXXXXARAGFRALLDRPTD 828
BLAST of jgi.p|Trimin1|353526 vs. uniprot
Match: A0A7S3L8H1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L8H1_9STRA) HSP 1 Score: 64.3 bits (155), Expect = 1.680e-7 Identity = 42/101 (41.58%), Postives = 56/101 (55.45%), Query Frame = 0
Query: 582 SEELECAVCMELMVEPV-AVSCGHLLCACCLRDWRRQCGDGRPPTCPTCQTDVKGS-TPMKQMKNAIGHLIDS--GLLPADDVANYRNRIGDTASAAPAHA 678
+EE CA+C+E+MVEPV AV CGH C CL D R+C TC++ + G P + + +AI L++ GL DDV YR R TA+ PA A
Sbjct: 146 TEEFACAICLEIMVEPVTAVPCGHSFCRTCLMDSVRECH--------TCRSALTGRPVPARSLNHAIALLVEHSPGLFATDDVEQYRAR---TAATKPAGA 235
BLAST of jgi.p|Trimin1|353526 vs. uniprot
Match: UPI001D169CCF (E3 ubiquitin-protein ligase TRIM39-like n=1 Tax=Mauremys mutica TaxID=74926 RepID=UPI001D169CCF) HSP 1 Score: 62.4 bits (150), Expect = 2.320e-6 Identity = 31/83 (37.35%), Postives = 44/83 (53.01%), Query Frame = 0
Query: 576 AAVGSASEELECAVCMELMVEPVAVSCGHLLCACCLRDWRRQCGDGRPPTCPTCQTDV-KGS-TPMKQMKNAIGHLIDSGLLP 656
A G +E C++C+E ++EPV ++CGH C CL + + G G P TCP C+ KG P Q+ N + L GL P
Sbjct: 5 ATAGEVQDEAICSICLEYLMEPVTIACGHNFCRACLSQYCAEKGAGTPLTCPQCRAQFQKGEFRPNTQLSNIVQKLKQLGLKP 87
BLAST of jgi.p|Trimin1|353526 vs. uniprot
Match: A0A8C3RZW3_CHESE (RING-type domain-containing protein n=1 Tax=Chelydra serpentina TaxID=8475 RepID=A0A8C3RZW3_CHESE) HSP 1 Score: 60.1 bits (144), Expect = 3.160e-6 Identity = 30/83 (36.14%), Postives = 43/83 (51.81%), Query Frame = 0
Query: 576 AAVGSASEELECAVCMELMVEPVAVSCGHLLCACCLRDWRRQCGDGRPPTCPTCQTDV-KGS-TPMKQMKNAIGHLIDSGLLP 656
A G +E+ CA+C+E ++EPV ++CGH C C+ + G G P CP C+ KG P Q+ N I + GL P
Sbjct: 5 ATAGEIQDEVICAICLEYLMEPVTIACGHNFCQACITQYCEGKGTGTPLACPQCRAQFQKGEFKPNTQLNNIIQKIKQLGLKP 87
BLAST of jgi.p|Trimin1|353526 vs. uniprot
Match: UPI001D16863D (E3 ubiquitin-protein ligase TRIM39-like n=1 Tax=Mauremys mutica TaxID=74926 RepID=UPI001D16863D) HSP 1 Score: 57.4 bits (137), Expect = 8.590e-5 Identity = 27/76 (35.53%), Postives = 41/76 (53.95%), Query Frame = 0
Query: 576 AAVGSASEELECAVCMELMVEPVAVSCGHLLCACCLRDWRRQCGDGRPPTCPTCQTDV-KGS-TPMKQMKNAIGHL 649
A G +E C++C+E ++EPV ++CGH C C+ + + G G P TCP C+ KG P Q+ N + L
Sbjct: 5 ATAGEVQDEAICSICLEYLMEPVTIACGHNFCRACIAQYCAEKGAGTPLTCPQCRAQFQKGEFRPNTQLSNIVQKL 80 The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353526 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 5
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >Trimin1|353526|estExt_Genemark1.C_Ctg_1680022 ID=Trimin1|353526|estExt_Genemark1.C_Ctg_1680022|Name=jgi.p|Trimin1|353526|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=829bpback to top |