mRNA_15721 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|353524
Unique NamemRNA_15721
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|353524 vs. uniprot
Match: A0A836CJ81_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ81_9STRA)

HSP 1 Score: 680 bits (1755), Expect = 9.380e-248
Identity = 324/324 (100.00%), Postives = 324/324 (100.00%), Query Frame = 1
Query:    1 MRCDGNVVGVSGHGIQPSFRSNITHHYQLREEDLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCGLRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAAEPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWGFYVDGWEMKDCSTLRDVDVQP 972
            MRCDGNVVGVSGHGIQPSFRSNITHHYQLREEDLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCGLRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAAEPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWGFYVDGWEMKDCSTLRDVDVQP
Sbjct:    1 MRCDGNVVGVSGHGIQPSFRSNITHHYQLREEDLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCGLRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAAEPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWGFYVDGWEMKDCSTLRDVDVQP 324          
BLAST of jgi.p|Trimin1|353524 vs. uniprot
Match: A0A836CJZ7_9STRA (Sulfotransferase family-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJZ7_9STRA)

HSP 1 Score: 333 bits (853), Expect = 4.730e-110
Identity = 175/285 (61.40%), Postives = 204/285 (71.58%), Query Frame = 1
Query:   85 LREEDLA-DHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERR-------PPGNRQLLGWSPL-ALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAAEPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWG 909
            LRE D A DHL++VPEYK+IFC IAKVSS++FNDL RSLRAPFDP MLEG  +GRIIPFGRNSY SHNWSLQ+LT A++D  W+KAVFYREPLTRFVSAY++KC +R       PP NR+   WSPL            C R FG+  P+F  VV+RL ++PR+ + HWR QHEFCG L   I EF FVE+L+R TSREKV ELL+ A VP+  F +D AFN  FP  A GD S   +P  H TNADA   SYYT YLAC+VFQYYYDDY LF M +P WAR WG
Sbjct:   76 LREGDFALDHLLIVPEYKLIFCFIAKVSSLSFNDLLRSLRAPFDPGMLEGEAYGRIIPFGRNSYRSHNWSLQDLTDALHDPAWLKAVFYREPLTRFVSAYRDKCGKRTHGARGLPPRNRRRRAWSPLHERKANHKHDKICLRSFGEDWPSFETVVDRLLREPRVTDPHWRRQHEFCGGLDRFIGEFQFVEVLERATSREKVGELLARAHVPN--FNSDAAFNLRFPPTAPGDAS--RDP--HATNADAAARSYYTPYLACVVFQYYYDDYALFGMQLPEWARAWG 354          
BLAST of jgi.p|Trimin1|353524 vs. uniprot
Match: A0A835YXU8_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXU8_9STRA)

HSP 1 Score: 268 bits (686), Expect = 1.140e-84
Identity = 140/292 (47.95%), Postives = 179/292 (61.30%), Query Frame = 1
Query:   97 DLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAA----EPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWGFYVDGWEMKDCSTLRD 957
            DL DHL+V+PE+K++FC IAK + ++FNDLFRSLR  +DPS+ EG  FGR      NSY +HN +L+ LT+ V D  W KAVFYREPL RFVSA++ KC R P                   G+  C   FG+++P FTEVV RL + P + N HWRPQ +FCG L  ++ EF  +E LD RTSREKV +LL    + D + +   AFN  FP     DP        E  +HTTNAD+ V  YYT YLAC VFQYY DDY+LF +  P W R+W F+   W   DC+TL++
Sbjct:  100 DLTDHLLVIPEHKLLFCFIAKNNCLSFNDLFRSLRERYDPSLAEGPNFGR------NSYTNHNMTLEQLTEYVYDPAWHKAVFYREPLVRFVSAFRSKCVREPHA-----------------GNGVCQAEFGRKYPQFTEVVGRLARGPPVSNPHWRPQADFCGGLSGMLSEFQTIEPLDARTSREKVAKLLKQVGIEDPESI--PAFNERFPPP---DPKTGVWHPEESPFHTTNADSVVQEYYTPYLACTVFQYYLDDYLLFGIPAPAWTRKWDFHAQQWARVDCATLKE 363          
BLAST of jgi.p|Trimin1|353524 vs. uniprot
Match: A0A835Z0T9_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z0T9_9STRA)

HSP 1 Score: 263 bits (673), Expect = 1.880e-83
Identity = 143/302 (47.35%), Postives = 181/302 (59.93%), Query Frame = 1
Query:   64 NITHHYQLREEDLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAA----EPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWGFYVDGWEMKDCSTLR 954
            N TH  QL   DLADHL+V+PE+K++FC IAK + ++FNDLFRSLR  +DPS+ EG  FGR      NSY +HN +L+ LT+ + D  W KAVFYREPL RFVSAY+ KC R                  +  G+  C   FG +HP F  VV+RL ++P IEN HWRPQ +FCG L  I+ EF  +E LD RTSREKV +LL    + D + +   AFN  FP     DP        +  +HTTNAD+ V  YYT + AC VFQYY DD++LF +  P W RQW F+   W   DC  L+
Sbjct:   36 NRTHPVQL-PGDLADHLLVIPEHKLLFCYIAKNNCLSFNDLFRSLRERYDPSLAEGPSFGR------NSYTNHNMTLEQLTEYIYDPTWHKAVFYREPLVRFVSAYRSKCVRE-----------------KHAGNEVCQSQFGIKHPLFKSVVKRLTREPPIENPHWRPQADFCGGLSGILSEFQTIEPLDARTSREKVAKLLKQVGIEDPESI--PAFNERFPPP---DPETGVWRPEQSPFHTTNADSVVAEYYTPFTACTVFQYYLDDFLLFGIPAPEWTRQWDFHAQHWTTGDCKPLQ 308          
BLAST of jgi.p|Trimin1|353524 vs. uniprot
Match: A0A835Z7D4_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7D4_9STRA)

HSP 1 Score: 221 bits (562), Expect = 9.050e-66
Identity = 129/291 (44.33%), Postives = 166/291 (57.04%), Query Frame = 1
Query:   97 DLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQR-HPTFTEVVERLQQQPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAAEPKW-HTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQ--WGFYVDGWEMKDCSTLR 954
            DL DH I+VPE+K++FC IAKV+S AFN LFRSLR+ +DP M EG      + FG N+Y  HN ++  + + V++  W KAVFYREPL RF+SA+K KCE+   G  + L              S C+ +      P F ++VERL Q PRI N HWRPQ +FCG L  II +   V+ LD  TSR +V ELL    V          F   FP     + S  A   W H+ +ADA+V   Y+ YLAC VFQY+ DDY+LF + VP W RQ  W F+   W   DC +LR
Sbjct:  121 DLMDHWIIVPEHKLMFCFIAKVNSAAFNQLFRSLRSRYDPQMAEGK-----VAFGLNNYLYHNMTVSQVAELVHNPSWHKAVFYREPLVRFLSAWKSKCEK---GVIRDL--------------SMCADVLHMSVAPDFPQIVERLWQSPRIVNPHWRPQVDFCGGLTGIIDQIQTVKRLDLTTSRAEVSELLQQVGVDPADV---PMFETRFPPLMQEEGSDGAGLHWDHSFHADASVQQAYSPYLACRVFQYFIDDYLLFGIPVPAWTRQHKWDFHRQNWSSGDCESLR 386          
BLAST of jgi.p|Trimin1|353524 vs. uniprot
Match: A0A835Z974_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z974_9STRA)

HSP 1 Score: 205 bits (522), Expect = 1.280e-57
Identity = 133/302 (44.04%), Postives = 155/302 (51.32%), Query Frame = 1
Query:   97 DLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRI---------IPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQ-RHPTFTEVVERLQQ---QPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDT-----------------AFNAHFPAAAAGDPSVAAEPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWG 909
            DL DHLIVVPE+K++FC IAK +S+AFNDLFRSLR   DPSM                  + FGRN+YA HN SL+ LT  V D  W KAVFYREPL RFVSAY+ KC+R    +  L                 C R+FG  +HP F+ V +RL      P   N HWRPQ EFCG L   + E+  VE LD R SRE V +LLS   V D    N                    FN HFP   AG    A     H T+AD  V  YYT   AC V +YY DDY+LF + VP   R  G
Sbjct:  223 DLVDHLIVVPEHKLLFCFIAKCNSLAFNDLFRSLRERHDPSMNTPESXXXXXXXXMADDSVKFGRNTYAYHNLSLEELTDRVYDPSWHKAVFYREPLVRFVSAYRSKCDRDSQEDGVL-----------------CKRVFGLGKHPRFSAVTQRLSDAAAHPIDANPHWRPQTEFCGGLAETLAEYQTVEALDARDSRENVAKLLSDIGVADPPNFNKXXXXXXXXXXXXXXESIPVFNLHFPPPDAGPD--AGPHNHHATHADDKVQRYYTPRRACTVVRYYLDDYLLFGVPVPALRRAAG 505          
BLAST of jgi.p|Trimin1|353524 vs. uniprot
Match: A0A835YPV5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPV5_9STRA)

HSP 1 Score: 182 bits (461), Expect = 1.900e-52
Identity = 115/270 (42.59%), Postives = 148/270 (54.81%), Query Frame = 1
Query:  172 AFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAAEPKW--------HTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWGFYVDGWEMKDCSTLR 954
            +FN LF SLR+ +D S+LEG  +GR      N   SHN +L  L   V D  W KAVFYREPL R++SAY+ KCE         +G           G   C+ +FG+ +PTF E VERL Q P ++N H+RPQ +FCG L  I+ +F  VE LD RTSR+ V  LL    V D + +   AFN  FP      P  AA   W        HTT+A A V++YYT YLAC+V  ++ DDY+ F + VP WA + G    G    DC+ LR
Sbjct:    9 SFNHLFTSLRSRYDESLLEGDIWGR------NDMHSHNMTLPQLADLVYDDTWHKAVFYREPLVRYLSAYRSKCE---------VGHDD--------GFELCTALFGKPNPTFAEAVERLTQDPPVDNPHFRPQVDFCGGLGAILPQFQTVEALDPRTSRDAVAALLRRVGVADPEGV--PAFNERFP------PFDAAAGAWRPNDSYARHTTDAAAAVEAYYTPYLACVVVTHFLDDYLTFGVAVPEWAWRLGLRDVGG---DCAALR 244          
BLAST of jgi.p|Trimin1|353524 vs. uniprot
Match: A0A835Z3G3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3G3_9STRA)

HSP 1 Score: 177 bits (448), Expect = 5.380e-49
Identity = 121/361 (33.52%), Postives = 158/361 (43.77%), Query Frame = 1
Query:  157 KVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFC-GLRNIIQEFNFVEL--------------------------------------------------------------------------------------LDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGDPSVAAEPKW--------HTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWARQWGFYVDGWEMKDCSTLR 954
            +V+ +AFN LF SLR+ +DPS+LEG  + R       S+  H   L+ LT+ + D  W KAVFYREPL RF+SAY+ KCE    G+                G+  C + FG+ +PTF E VERL  QP I N HWRPQ +FC GL  I  +F  +                                                                                        LD RTSR+KV +LL    + D + +   AFN  FP     DP      +W        HTTNA++ V++YYT YLAC VFQY+ DDY+LF + VP W R+W F+   W   DC+TLR
Sbjct:   40 EVNCLAFNKLFNSLRSRYDPSLLEGPAWNRT------SHVQHRIKLKTLTRMIYDPTWHKAVFYREPLARFLSAYRSKCES---GHDD--------------GAELCEQEFGKPNPTFEEAVERLVTQPYIWNPHWRPQVDFCSGLSAITSQFLALNAITDAQSSNCAHYRERSRMPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMPPHPHCHTAVNAHAXXXXXXXXXXXXXXXXXXXXXXLDARTSRDKVTQLLHRVGIEDAETI--PAFNERFPPL---DPETG---EWRPHALHSNHTTNAESAVEAYYTPYLACRVFQYFIDDYILFGIPVPAWTRKWDFHAQHWATADCATLR 369          
BLAST of jgi.p|Trimin1|353524 vs. uniprot
Match: A0A835Z948_9STRA (Sulfotransferase family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z948_9STRA)

HSP 1 Score: 171 bits (433), Expect = 3.690e-46
Identity = 116/319 (36.36%), Postives = 161/319 (50.47%), Query Frame = 1
Query:    1 MRCDGNVVGVSGHGIQPSFRSNITHHYQLREEDLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFP--AAAAGDPS---------------VAAEP-KWHTTNADATVDSYY-TRYLACIVFQYYYDDYVLFEMDVPVWA 897
            MRC G+ V  + H   P+             ++L  H I+VPE K++FC I KV   +FNDLFRS R+ +DP   +G +     P+  N+  +HN S  ++ + V D  W KAVF+REPL RF+SA++ KCE     +R+                  C+  FG + P F   ++RL+Q P I +AHWRPQ +FCG L + +  F  VE LD  TS EKV  LL    V         AF+ HFP  A++  D S                 A P + H T+A   +  YY +  +AC V QYY DDY+LF + +P WA
Sbjct:   26 MRCTGDGVTTAAHVTAPAPVM----------DNLYQHWIIVPEIKLLFCFIEKVGCESFNDLFRSYRSRWDPRQAKGRK-----PWRLNNMKAHNMSEADVDRLVLDETWHKAVFFREPLERFLSAFRSKCEPGHDTDRE-----------------HCTDTFGSKDPPFAVAIDRLRQAPPITDAHWRPQSDFCGGLPSKLSHFQTVEQLDPATSHEKVSALLHTLGVQPESI---PAFHRHFPRPASSVADSSGTXXXXXXXXGAKQKAGAVPNETHLTHAADALRKYYLSPAMACAVVQYYIDDYLLFGIALPQWA 309          
BLAST of jgi.p|Trimin1|353524 vs. uniprot
Match: A0A835YYQ7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYQ7_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.150e-35
Identity = 77/195 (39.49%), Postives = 106/195 (54.36%), Query Frame = 1
Query:   91 EEDLADHLIVVPEYKIIFCSIAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQNLTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALPPRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCG-LRNIIQEFNFVELLDRRTSREKVVELLS 672
            + +L +  I+VPE+K++FC I KV   +FN LF+SLRA +DP+            +G N+  +HN +  ++   V D  W KAVFYREPL RF+SA++ KCE    G+RQ                  C+  FG   P F   V+RL QQ  I +AHWR Q  FCG L++ +  F  VE LD  TSR+K    L+
Sbjct:   46 KSNLYNKWIIVPEHKLLFCFIEKVGCKSFNQLFKSLRARYDPTQAAAG------VWGSNNMTAHNLTEADIDAYVEDPLWHKAVFYREPLVRFLSAFRSKCEPHHDGDRQ-----------------HCTATFGSEQPPFAAAVDRLSQQQPITDAHWRRQIHFCGGLQSKLVHFQTVEQLDAITSRQKCTRCLA 217          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353524 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJ81_9STRA9.380e-248100.00Sulfotransferase family-domain-containing protein ... [more]
A0A836CJZ7_9STRA4.730e-11061.40Sulfotransferase family-domain-containing protein ... [more]
A0A835YXU8_9STRA1.140e-8447.95Sulfotransferase family-domain-containing protein ... [more]
A0A835Z0T9_9STRA1.880e-8347.35Sulfotransferase family-domain-containing protein ... [more]
A0A835Z7D4_9STRA9.050e-6644.33Sulfotransferase family-domain-containing protein ... [more]
A0A835Z974_9STRA1.280e-5744.04Sulfotransferase family-domain-containing protein ... [more]
A0A835YPV5_9STRA1.900e-5242.59Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z3G3_9STRA5.380e-4933.52Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835Z948_9STRA3.690e-4636.36Sulfotransferase family-domain-containing protein ... [more]
A0A835YYQ7_9STRA3.150e-3539.49Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_168contigContig_168:130694..131668 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|353524|estExt_Genemark1.C_Ctg_1680019
BRITEko00000,ko00001,ko01000,ko01003
KEGG rclassRC00007,RC00231
KEGG ReactionR02180,R10873
KEGG Pathwayko00532,map00532
KEGG koko:K07779,ko:K08105
EC2.8.2.35,2.8.2.5
GOsGO:0000139,GO:0001537,GO:0003674,GO:0003824,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0006022,GO:0006023,GO:0006024,GO:0006029,GO:0006082,GO:0006790,GO:0006807,GO:0008146,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009987,GO:0012505,GO:0016020,GO:0016021,GO:0016053,GO:0016740,GO:0016782,GO:0017144,GO:0019538,GO:0019752,GO:0030166,GO:0030203,GO:0030205,GO:0030208,GO:0031090,GO:0031224,GO:0031984,GO:0032787,GO:0034645,GO:0042301,GO:0043167,GO:0043168,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044272,GO:0044281,GO:0044283,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0046394,GO:0050651,GO:0050655,GO:0071704,GO:0072330,GO:0098588,GO:0098791,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1903510
Preferred nameCHST14
DescriptionN-acetylgalactosamine 4-O-sulfotransferase activity
COG categoryG
Max annot lvl33208|Metazoa
EggNOG OGsKOG4651@1|root,KOG4651@2759|Eukaryota,38CH1@33154|Opisthokonta,3BGMN@33208|Metazoa,3CYG1@33213|Bilateria,487HA@7711|Chordata
Evalue5.75e-09
Seed ortholog7739.XP_002611332.1
Hectar predicted targeting categoryother localisation
TranscriptId353846
TrackFilteredModels1
ProteinId353524
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353524gene_15721Tribonema minus UTEX_B_3156 geneContig_168 130694..131668 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_15721_1exon_15721_1Tribonema minus UTEX_B_3156 exonContig_168 130694..131668 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_15721CDS_15721Tribonema minus UTEX_B_3156 CDSContig_168 130694..131668 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353524Trimin1|353524|estExt_Genemark1.C_Ctg_1680019Tribonema minus UTEX_B_3156 polypeptideContig_168 130694..131668 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_15721 ID=mRNA_15721|Name=jgi.p|Trimin1|353524|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=975bp|location=Sequence derived from alignment at Contig_168:130694..131668- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCGCTGCGACGGCAACGTTGTCGGCGTGAGCGGCCACGGTATCCAGCC
AAGCTTTCGCAGCAACATCACCCACCACTACCAATTACGCGAGGAGGACC
TCGCCGACCACCTGATAGTGGTGCCGGAGTACAAAATCATATTCTGCTCT
ATAGCCAAGGTCAGCTCGGTGGCATTCAACGACCTGTTCCGCTCGCTGCG
TGCCCCCTTCGACCCCAGCATGCTCGAGGGGACAAGGTTCGGCCGCATCA
TACCCTTCGGCCGCAACAGCTATGCGAGCCACAACTGGTCCCTGCAGAAC
CTGACGCAAGCTGTCAATGACAGGGATTGGGTGAAGGCTGTCTTTTACAG
AGAGCCACTGACGCGGTTCGTCAGCGCCTACAAAGAAAAGTGCGAAAGAA
GGCCGCCGGGTAACAGACAGCTACTGGGTTGGTCCCCGCTGGCGCTCCCA
CCGCGGCCACCTGGCAGCAGTTTCTGCAGCAGGATTTTCGGGCAGCGCCA
CCCGACGTTCACCGAAGTGGTGGAGAGGCTTCAGCAGCAGCCGCGCATCG
AAAACGCGCACTGGCGCCCGCAGCACGAGTTCTGCGGGCTCCGCAACATC
ATTCAGGAGTTCAACTTCGTGGAGCTTCTGGACAGGCGCACGTCCAGGGA
GAAGGTGGTGGAGCTTCTCAGCGCGGCGCGCGTACCGGACTTGAAGTTCA
TGAACGACACCGCGTTCAACGCGCATTTCCCCGCGGCGGCCGCAGGTGAC
CCATCCGTCGCCGCCGAGCCGAAGTGGCACACGACGAATGCGGACGCCAC
CGTCGACTCATACTACACCCGGTATCTCGCTTGCATAGTCTTTCAGTATT
ATTATGACGATTACGTTTTGTTCGAAATGGATGTGCCCGTGTGGGCACGG
CAGTGGGGCTTTTACGTCGACGGTTGGGAGATGAAGGACTGCAGCACGCT
GCGGGATGTAGACGTCCAGCCGTGA
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protein sequence of jgi.p|Trimin1|353524

>Trimin1|353524|estExt_Genemark1.C_Ctg_1680019 ID=Trimin1|353524|estExt_Genemark1.C_Ctg_1680019|Name=jgi.p|Trimin1|353524|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=325bp
MRCDGNVVGVSGHGIQPSFRSNITHHYQLREEDLADHLIVVPEYKIIFCS
IAKVSSVAFNDLFRSLRAPFDPSMLEGTRFGRIIPFGRNSYASHNWSLQN
LTQAVNDRDWVKAVFYREPLTRFVSAYKEKCERRPPGNRQLLGWSPLALP
PRPPGSSFCSRIFGQRHPTFTEVVERLQQQPRIENAHWRPQHEFCGLRNI
IQEFNFVELLDRRTSREKVVELLSAARVPDLKFMNDTAFNAHFPAAAAGD
PSVAAEPKWHTTNADATVDSYYTRYLACIVFQYYYDDYVLFEMDVPVWAR
QWGFYVDGWEMKDCSTLRDVDVQP*
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mRNA from alignment at Contig_168:130694..131668-

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_15721 ID=mRNA_15721|Name=jgi.p|Trimin1|353524|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=975bp|location=Sequence derived from alignment at Contig_168:130694..131668- (Tribonema minus UTEX_B_3156 )
ATGCGCTGCGACGGCAACGTTGTCGGCGTGAGCGGCCACGGTATCCAGCC AAGCTTTCGCAGCAACATCACCCACCACTACCAATTACGCGAGGAGGACC TCGCCGACCACCTGATAGTGGTGCCGGAGTACAAAATCATATTCTGCTCT ATAGCCAAGGTCAGCTCGGTGGCATTCAACGACCTGTTCCGCTCGCTGCG TGCCCCCTTCGACCCCAGCATGCTCGAGGGGACAAGGTTCGGCCGCATCA TACCCTTCGGCCGCAACAGCTATGCGAGCCACAACTGGTCCCTGCAGAAC CTGACGCAAGCTGTCAATGACAGGGATTGGGTGAAGGCTGTCTTTTACAG AGAGCCACTGACGCGGTTCGTCAGCGCCTACAAAGAAAAGTGCGAAAGAA GGCCGCCGGGTAACAGACAGCTACTGGGTTGGTCCCCGCTGGCGCTCCCA CCGCGGCCACCTGGCAGCAGTTTCTGCAGCAGGATTTTCGGGCAGCGCCA CCCGACGTTCACCGAAGTGGTGGAGAGGCTTCAGCAGCAGCCGCGCATCG AAAACGCGCACTGGCGCCCGCAGCACGAGTTCTGCGGGCTCCGCAACATC ATTCAGGAGTTCAACTTCGTGGAGCTTCTGGACAGGCGCACGTCCAGGGA GAAGGTGGTGGAGCTTCTCAGCGCGGCGCGCGTACCGGACTTGAAGTTCA TGAACGACACCGCGTTCAACGCGCATTTCCCCGCGGCGGCCGCAGGTGAC CCATCCGTCGCCGCCGAGCCGAAGTGGCACACGACGAATGCGGACGCCAC CGTCGACTCATACTACACCCGGTATCTCGCTTGCATAGTCTTTCAGTATT ATTATGACGATTACGTTTTGTTCGAAATGGATGTGCCCGTGTGGGCACGG CAGTGGGGCTTTTACGTCGACGGTTGGGAGATGAAGGACTGCAGCACGCT GCGGGATGTAGACGTCCAGCCGTGA
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Coding sequence (CDS) from alignment at Contig_168:130694..131668-

>mRNA_15721 ID=mRNA_15721|Name=jgi.p|Trimin1|353524|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=975bp|location=Sequence derived from alignment at Contig_168:130694..131668- (Tribonema minus UTEX_B_3156 )
ATGCGCTGCGACGGCAACGTTGTCGGCGTGAGCGGCCACGGTATCCAGCC
AAGCTTTCGCAGCAACATCACCCACCACTACCAATTACGCGAGGAGGACC
TCGCCGACCACCTGATAGTGGTGCCGGAGTACAAAATCATATTCTGCTCT
ATAGCCAAGGTCAGCTCGGTGGCATTCAACGACCTGTTCCGCTCGCTGCG
TGCCCCCTTCGACCCCAGCATGCTCGAGGGGACAAGGTTCGGCCGCATCA
TACCCTTCGGCCGCAACAGCTATGCGAGCCACAACTGGTCCCTGCAGAAC
CTGACGCAAGCTGTCAATGACAGGGATTGGGTGAAGGCTGTCTTTTACAG
AGAGCCACTGACGCGGTTCGTCAGCGCCTACAAAGAAAAGTGCGAAAGAA
GGCCGCCGGGTAACAGACAGCTACTGGGTTGGTCCCCGCTGGCGCTCCCA
CCGCGGCCACCTGGCAGCAGTTTCTGCAGCAGGATTTTCGGGCAGCGCCA
CCCGACGTTCACCGAAGTGGTGGAGAGGCTTCAGCAGCAGCCGCGCATCG
AAAACGCGCACTGGCGCCCGCAGCACGAGTTCTGCGGGCTCCGCAACATC
ATTCAGGAGTTCAACTTCGTGGAGCTTCTGGACAGGCGCACGTCCAGGGA
GAAGGTGGTGGAGCTTCTCAGCGCGGCGCGCGTACCGGACTTGAAGTTCA
TGAACGACACCGCGTTCAACGCGCATTTCCCCGCGGCGGCCGCAGGTGAC
CCATCCGTCGCCGCCGAGCCGAAGTGGCACACGACGAATGCGGACGCCAC
CGTCGACTCATACTACACCCGGTATCTCGCTTGCATAGTCTTTCAGTATT
ATTATGACGATTACGTTTTGTTCGAAATGGATGTGCCCGTGTGGGCACGG
CAGTGGGGCTTTTACGTCGACGGTTGGGAGATGAAGGACTGCAGCACGCT
GCGGGATGTAGACGTCCAGCCGTGA
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