mRNA_16957 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|178256
Unique Name	mRNA_16957
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A835ZB42_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB42_9STRA)

HSP 1 Score: 276 bits (705), Expect = 6.300e-94
Identity = 136/136 (100.00%), Postives = 136/136 (100.00%), Query Frame = 1

Query:    1 MQALELHEMEREGFGWTQRACSTVLLACGKAGRLNAALQLIDEMEKRTFSPNDVDYLKLIEACVRGKNVIRAGDRGGSKQALEFLQRMQDKGPVPDIRHYAAAMKVCVTEGDSAKAVNIFRSMRDQVIVMKTYVCV 408
            MQALELHEMEREGFGWTQRACSTVLLACGKAGRLNAALQLIDEMEKRTFSPNDVDYLKLIEACVRGKNVIRAGDRGGSKQALEFLQRMQDKGPVPDIRHYAAAMKVCVTEGDSAKAVNIFRSMRDQVIVMKTYVCV
Sbjct:    1 MQALELHEMEREGFGWTQRACSTVLLACGKAGRLNAALQLIDEMEKRTFSPNDVDYLKLIEACVRGKNVIRAGDRGGSKQALEFLQRMQDKGPVPDIRHYAAAMKVCVTEGDSAKAVNIFRSMRDQVIVMKTYVCV 136

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A835Z5Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5Z3_9STRA)

HSP 1 Score: 194 bits (492), Expect = 8.890e-59
Identity = 99/121 (81.82%), Postives = 103/121 (85.12%), Query Frame = 1

Query:   25 MEREGFGWTQRACSTVLLACGKAGRLNAALQLIDEMEKRTFSPNDVDYLKLIEACVRGK-NVIRAGDRGGSKQALEFLQRMQDKGPVPDIRHYAAAMKVCVTEGDSAKAVNIFRSMRDQVI 384
            MEREG  WT RACSTVL A GKAGRLNAALQLI EME+R  SP+ +DYL LI AC RGK N  RAGDRGGS+QALE LQRMQDKGPVPDIRHY AAMKVCVTEGDSAKAVNIFRSMRDQ I
Sbjct:    1 MEREGLAWTHRACSTVLQAFGKAGRLNAALQLIGEMEQRGISPDHIDYLTLIGACARGKKNGTRAGDRGGSEQALELLQRMQDKGPVPDIRHYTAAMKVCVTEGDSAKAVNIFRSMRDQGI 121

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A835YWM4_9STRA (Smr domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWM4_9STRA)

HSP 1 Score: 191 bits (485), Expect = 2.720e-56
Identity = 98/133 (73.68%), Postives = 109/133 (81.95%), Query Frame = 1

Query:    4 QALEL-HEMEREGFGWTQRACSTVLLACGKAGRLNAALQLIDEMEKRTFSPNDVDYLKLIEACVRGK----NVIRAGDRGGSKQALEFLQRMQDKGPVPDIRHYAAAMKVCVTEGDSAKAVNIFRSMRDQVIV 387
            +ALEL HE EREG  WT RACST L A GKAGRLNAALQLI EME+R  SP+ +DYL L  AC RG     NVIRAGDRGGS+Q LE L+RMQDKGPVPDIRHY+AAMKVC+TEG+SAKAVNIFRSMRDQ ++
Sbjct:   42 EALELLHETEREGLAWTHRACSTTLQAFGKAGRLNAALQLIGEMEQRGISPDHIDYLTLTGACARGNTRGNNVIRAGDRGGSEQVLEILRRMQDKGPVPDIRHYSAAMKVCMTEGNSAKAVNIFRSMRDQHVM 174

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A835Z1B2_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z1B2_9STRA)

HSP 1 Score: 175 bits (443), Expect = 2.540e-50
Identity = 88/110 (80.00%), Postives = 95/110 (86.36%), Query Frame = 1

Query:    7 ALEL-HEMEREGFGWTQRACSTVLLACGKAGRLNAALQLIDEMEKRTFSPNDVDYLKLIEACVRGKNVIRAGDRGGSKQALEFLQRMQDKGPVPDIRHYAAAMKVCVTEG 333
            ALEL H+MEREGFGWT RA  TVL A GK GRLNAAL LIDEME+R FSP D+DYL LI AC RGK+ +RAGDRGGS+QALEFLQRMQDKGPVPDIRHY AAMKVCVT+G
Sbjct:  179 ALELLHKMEREGFGWTLRARGTVLQALGKDGRLNAALHLIDEMEQRNFSPTDLDYLVLIVACARGKSGMRAGDRGGSEQALEFLQRMQDKGPVPDIRHYNAAMKVCVTKG 288

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A836CK12_9STRA (PPR_long domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK12_9STRA)

HSP 1 Score: 165 bits (418), Expect = 4.430e-49
Identity = 82/105 (78.10%), Postives = 89/105 (84.76%), Query Frame = 1

Query:   79 ACGKAGRLNAALQLIDEMEKRTFSPNDVDYLKLIEACVRGKNVIRAGDRGGSKQALEFLQRMQDKGPVPDIRHYAAAMKVCVTEGDSAKAVNIFRSMRDQVIVMK 393
            A GKAGRL+AALQLIDEM++R  SPNDVDYL LI AC  GKNV+RAGDRGGSKQALE LQRMQD GPVPDIRHY AAMKVC TEGD AKA+NIF S RD+ + MK
Sbjct:    1 AFGKAGRLSAALQLIDEMKQRGISPNDVDYLMLIVACGHGKNVMRAGDRGGSKQALELLQRMQDTGPVPDIRHYDAAMKVCATEGDLAKAINIFESARDKAMGMK 105

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A836CLV8_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CLV8_9STRA)

HSP 1 Score: 167 bits (422), Expect = 1.170e-47
Identity = 81/110 (73.64%), Postives = 89/110 (80.91%), Query Frame = 1

Query:   25 MEREGFGWTQRACSTVLLACGKAGRLNAALQLIDEMEKRTFSPNDVDYLKLIEACVRGKNVIRAGDRGGSKQALEFLQRMQDKGPVPDIRHYAAAMKVCVTEGDSAKAVN 354
            MEREGF WTQRAC T+L ACGKAGRLNAALQLIDEM++R  SP+  D+L LI AC  GKN +RAG+RGGS+QALE LQRMQDKGPVPDIRHY AAM VC T GD   A N
Sbjct:    1 MEREGFTWTQRACGTLLQACGKAGRLNAALQLIDEMQQRNISPSGADHLILIVACNCGKNGMRAGNRGGSEQALELLQRMQDKGPVPDIRHYGAAMTVCATGGDLVNAAN 110

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A835YW77_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YW77_9STRA)

HSP 1 Score: 145 bits (366), Expect = 1.750e-39
Identity = 71/96 (73.96%), Postives = 80/96 (83.33%), Query Frame = 1

Query:   97 RLNAALQLIDEMEKRTFSPNDVDYLKLIEACVRGKNVIRAGDRGGSKQALEFLQRMQDKGPVPDIRHYAAAMKVCVTEGDSAKAVNIFRSMRDQVI 384
            RLNAALQLIDEM++R  SP+D DYL LI AC RGK   R GDRGGS+QALE LQRMQDKGPVPD+RHY+AA+ VCVTEGD A AVN F+SMRD+ I
Sbjct:   13 RLNAALQLIDEMQQRNISPSDADYLILIVACDRGKRRTRGGDRGGSEQALELLQRMQDKGPVPDLRHYSAAITVCVTEGDLANAVNTFQSMRDKGI 108

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A836CEM5_9STRA (PPR_long domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CEM5_9STRA)

HSP 1 Score: 137 bits (346), Expect = 3.060e-36
Identity = 69/121 (57.02%), Postives = 84/121 (69.42%), Query Frame = 1

Query:   25 MEREGFGWTQRACSTVLLACGKAGRLNAALQLIDEMEKRTFSPNDVDYLKLIEACVRGKNVIRAGD-RGGSKQALEFLQRMQDKGPVPDIRHYAAAMKVCVTEGDSAKAVNIFRSMRDQVI 384
            ME++GF WTQ AC  VL+ACGKAGRLN A+QLID M     SP+   YL LI+ CVR      AGD RGGSK+ALE LQ M+D GPVP+IRH+ AA+ VCV E +   A+ IFR M+ + I
Sbjct:    1 MEQDGFRWTQVACGAVLVACGKAGRLNDAVQLIDNMRNHRVSPDGRTYLTLIQQCVRNSASTHAGDSRGGSKRALELLQLMKDAGPVPNIRHFTAAIMVCVAERNGISAITIFRMMQHEGI 121

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A836CIT7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIT7_9STRA)

HSP 1 Score: 132 bits (332), Expect = 6.340e-36
Identity = 64/91 (70.33%), Postives = 74/91 (81.32%), Query Frame = 1

Query:   16 LHEMEREGFGWTQRACSTVLLACGKAGRLNAALQLIDEMEKRTFSPNDVDYLKLIEACVRGKNVIRAGDRGGSKQALEFLQRMQDKGPVPD 288
            L+EMEREGFGWT R CSTVL A GKAGRL  ALQLI++M +R  +PND DYL LI AC RGK+ + AGDRGGS+QALE LQ MQD+GP+PD
Sbjct:   25 LYEMEREGFGWTHRPCSTVLQAFGKAGRLAVALQLINKMRERGINPNDADYLILIMACHRGKSGMLAGDRGGSQQALELLQLMQDRGPMPD 115

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A835YWR0_9STRA (PPR_long domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWR0_9STRA)

HSP 1 Score: 117 bits (294), Expect = 4.940e-31
Identity = 62/121 (51.24%), Postives = 77/121 (63.64%), Query Frame = 1

Query:   16 LHEMEREGFGWTQRACSTVLLACGKAGRLNAALQLIDEMEKRTFSPNDVDYLKLIEACVRGKNVIRA-GD-RGGSKQALEFLQRMQDKGPVPDIRHYAAAMKVCVTEGDSAKAVNIFRSMR 372
            L  M+     WT RACS  LLACG AGRLN A QLI +M +R  SP   DYL+LI  C +    +RA GD R GSKQA+E LQ M+  G +P+ +HY AA+ VC   GD A AV+IF+ M+
Sbjct:   23 LSHMDNNNTKWTVRACSHALLACGFAGRLNDAFQLIQQMHQRGISPTSGDYLQLIRECHQSDKKVRAAGDSRNGSKQAMELLQHMEQLGVMPNFKHYGAAINVCGKAGDWASAVHIFQQMQ 143

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A836CIZ5_9STRA (Aldo/Keto reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIZ5_9STRA)

HSP 1 Score: 672 bits (1734), Expect = 3.820e-244
Identity = 336/336 (100.00%), Postives = 336/336 (100.00%), Query Frame = 1

Query:    1 MRASKLCFLLLSVLAVAVLGAELVCEGDQCEPPPHVPATFTLNDGNTMPRVGYGTAGLGESVTMNVLTALKAGFRHIDSAQAYEWYNERGVGAALLKASEEGEVIFIRTPRKCIPRDSIFVTSKLHPRDFGARTRKQFHESLHDLQTDYVDLFLLHYAECWSGLHCPGEPGTWQEAWAALGALQAEGKIRSLGVSNFNPDDLRALIAAAQRGDAPMPAVVQNWFDPLHRDAEIRAICAAHNITYVSYSTLGTQHPGRGGNPVLTNPVIKAIAARQGTSPARVVLSWALQSGVGVLPRAGRAAHVEDNAQLLTGGGGDALAVFLSAADMAAIDALAT 1008
            MRASKLCFLLLSVLAVAVLGAELVCEGDQCEPPPHVPATFTLNDGNTMPRVGYGTAGLGESVTMNVLTALKAGFRHIDSAQAYEWYNERGVGAALLKASEEGEVIFIRTPRKCIPRDSIFVTSKLHPRDFGARTRKQFHESLHDLQTDYVDLFLLHYAECWSGLHCPGEPGTWQEAWAALGALQAEGKIRSLGVSNFNPDDLRALIAAAQRGDAPMPAVVQNWFDPLHRDAEIRAICAAHNITYVSYSTLGTQHPGRGGNPVLTNPVIKAIAARQGTSPARVVLSWALQSGVGVLPRAGRAAHVEDNAQLLTGGGGDALAVFLSAADMAAIDALAT
Sbjct:    1 MRASKLCFLLLSVLAVAVLGAELVCEGDQCEPPPHVPATFTLNDGNTMPRVGYGTAGLGESVTMNVLTALKAGFRHIDSAQAYEWYNERGVGAALLKASEEGEVIFIRTPRKCIPRDSIFVTSKLHPRDFGARTRKQFHESLHDLQTDYVDLFLLHYAECWSGLHCPGEPGTWQEAWAALGALQAEGKIRSLGVSNFNPDDLRALIAAAQRGDAPMPAVVQNWFDPLHRDAEIRAICAAHNITYVSYSTLGTQHPGRGGNPVLTNPVIKAIAARQGTSPARVVLSWALQSGVGVLPRAGRAAHVEDNAQLLTGGGGDALAVFLSAADMAAIDALAT 336

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A6H5KUT1_9PHAE (Aldo_ket_red domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KUT1_9PHAE)

HSP 1 Score: 245 bits (625), Expect = 5.780e-75
Identity = 144/325 (44.31%), Postives = 191/325 (58.77%), Query Frame = 1

Query:    4 RASKLCFLLLSVL---AVAVLGAELVCEGDQCEPPPHVPATFTLNDGNTMPRVGYGTAGLGESVTMNVLTALKAGFRHIDSAQAYEWYNERGVGAALLKAS----------EEGEVIFIRTPRKCIPRDSIFVTSKLHPRDFGA-RTRKQFHESLHDLQTDYVDLFLLHYAECWSGLHCPGEPGTWQEAWAALGALQAEGKIRSLGVSNFNPDDLRALIAAAQRGDAPMPAVVQNWFDPLHRDAEIRAICAAHNITYVSYSTLGTQHPGRGG-----NPVLTNPVIKAIAARQGTSPARVVLSWALQSGVGVLPRAGRAAHVEDN 921
            RAS  C+L+  +L   A +  GA L   G++C   P +P+   LN+G  +PR+G+GTAGLG++    V  AL AG+RHID+AQA EWY E  VG AL +A+          +EGE     +    +PR+ +FVT+K+HPRDFGA R       S  +LQ   VDL LLH   CW G  CP  P  WQ+AW  L  + ++G +R++GVSNF+   LR L+  A       PA VQNW DP H+D E+RA+CA H I Y++YSTLG Q   R       NPV T+P + AIA+  GTS   V LSWALQSG  +LPR+     ++ N
Sbjct:    8 RASAACWLMAMLLDGQASSAAGA-LDAGGEECRIIPRLPSHVQLNNGVIIPRIGFGTAGLGQATEEAVAVALTAGYRHIDTAQAQEWYREEAVGRALKQATLSKTDLSPREKEGESFTAMSGAALLPREHVFVTTKIHPRDFGAERLGAMVEASSSNLQG--VDLLLLHAPFCWPG-SCPVNPAPWQDAWRQLEDMYSKGAVRAIGVSNFSESLLRELLGMA----TVAPAAVQNWMDPFHQDREVRALCAEHGIAYIAYSTLGGQWAHRPSSSMSPNPVSTDPTLIAIASAHGTSVQTVALSWALQSGAIILPRSSNLDRIKGN 324

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A4D9D7R8_9STRA (Aldo_ket_red domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7R8_9STRA)

HSP 1 Score: 223 bits (567), Expect = 4.100e-67
Identity = 143/329 (43.47%), Postives = 199/329 (60.49%), Query Frame = 1

Query:   37 VLAVAVLGAELVCEGDQCEPPPHVPATFTLNDGNTMPRVGYGTAGLGESVTMNVLTALKAGFRHIDSAQAYEWYNERGVGAALLKASEEGEVIFIRTPRKC-IPRDSIFVTSKLHPRDFG-ARTRKQFHESLHDLQTDYVDLFLLHYAEC--WSGLHCPGEP--GTWQEAWAALGALQAEGKIRSLGVSNFNPDDLRALIAAAQRGDAPMPAVVQNWFDPLHRDAEIRAICAAHNITYVSYSTLGTQ-HPGRGGNPVLTNPVIKAIAARQGTSPARVVLSWALQSGVGVLPRAGRAAHVEDNAQLLTGGGGDALAVFLSAADMAAIDAL 1002
            V+A+ +  A+L   G Q +        F L +G  MP VG+GTAGLG+   +  L A+  GFRHID+AQA EWYNE    AA+ ++ +E           C +PR+ +F+ +K+HPR FG  RT + F+ SL  L+T YVDL LLH ++C  W+GL C  +   GT+ +AW AL +L  +G+++++GVSNFN + L AL + A     P+  VVQN  DP  +D E+RA C A  + Y  YSTLGTQ  P  G NPVL +PVI+ +A R G SPA +VL WA Q GV V+PR+  A H+++ A+LL     D + V LS  +M  + AL
Sbjct:    7 VVALFLFAAKLSRVGGQSDHAEPKEGNFRLRNGVEMPLVGFGTAGLGDGEQLAPLYAILKGFRHIDTAQATEWYNE----AAIAQSVDE-----------CGMPREKLFLVTKVHPRYFGYERTLRSFNHSLAALRTSYVDLLLLHTSDCSDWTGL-CEKDSSRGTFFDAWRALESLYHKGQVKAIGVSNFNVEQLEALSSTAV---VPIH-VVQNHMDPFKQDREVRAWCQARGVLYTGYSTLGTQWRPPGGQNPVLNHPVIQTLAQRHGVSPALLVLVWARQEGVAVIPRSSEAKHIDELARLLPKAK-DRVQVVLSEDEMKQMQAL 314

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: I0YNU5_COCSC (Aldo/keto reductase (Fragment) n=1 Tax=Coccomyxa subellipsoidea (strain C-169) TaxID=574566 RepID=I0YNU5_COCSC)

HSP 1 Score: 216 bits (551), Expect = 2.680e-65
Identity = 128/275 (46.55%), Postives = 162/275 (58.91%), Query Frame = 1

Query:  121 TLNDGNTMPRVGYGTAGLGESVTMNVLTALKAGFRHIDSAQAYEWYNERGVGAALLKASEEGEVIFIRTPRKCIPRDSIFVTSKLHPRDFGARTRK-QFHESLHDLQTDYVDLFLLHYAECWSGLHCPG--EPGTWQEAWAALGALQAEGKIRSLGVSNFNPDDLRALIAAAQRGDAPMPAVVQNWFDPLHRDAEIRAICAAHNITYVSYSTLGTQHPGRG--GNPVLTNPVIKAIAARQGTSPARVVLSWALQSGVGVLPRAGRAAHVEDNAQL 930
            TLN+G  MP VG+GTAGLG +       AL +G+R +DSAQA EWY E  VG A+LK+               +PR+ +F+TSKLHPR  G      QF +SL  L  + VDLFLLHY ECW GL   G    GTW ++W AL  L  +G +R++GVSNF  D+L  L+A A+      PA+VQ   DPL  DAE+RA C    I Y  YSTLG+Q   RG   NPVLTNPV+  +A   G   A+VVL WALQ G G++PR+ +   +  N  L
Sbjct:    2 TLNNGVVMPLVGFGTAGLGAATEEATAWALASGYRLLDSAQAQEWYREDLVGLAVLKSR--------------VPREQVFLTSKLHPRHHGREEAMIQFTKSLSALAVEQVDLFLLHYPECWPGLCGEGFTPKGTWHDSWRALEDLVDKGLVRAIGVSNFGIDELAELLAMARI----KPALVQRHSDPLAADAEVRAFCRLAGIQYQGYSTLGSQWLMRGMDENPVLTNPVVDRVANETGRDAAQVVLRWALQHGQGIVPRSSKKERIAANRDL 258

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A7S2UWQ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UWQ9_9STRA)

HSP 1 Score: 214 bits (544), Expect = 6.380e-64
Identity = 127/315 (40.32%), Postives = 170/315 (53.97%), Query Frame = 1

Query:   76 EGDQCEPPPHVPATFTLNDGNTMPRVGYGTAGLGESVTMNVLTALKAGFRHIDSAQAYEWYNERGVGAALLKASEEGEVIFIRTPRKCIPRDSIFVTSKLHPRDF--GARTRKQFHESLHDLQTDYVDLFLLHYAECWSGLHCPGEPGTWQEAWAALGALQAEGKIRSLGVSNFNPDDLRALIAAAQRGDAPMPAVVQNWFDPLHRDAEIRAICAAHNITYVSYSTLGTQHPGRG----GNPVLTNPVIKAIAARQGTSPARVVLSWALQSGVGVLPRAGRAAHVEDNAQLLTGGGGDALAVFLSAADMAAIDAL 1002
            E D C  P  +PATF L +G  +P +G+G AGLG+     V  A++AGF H DSAQA EWYNE G+G AL    +               R ++F+ +KLHPRD+   AR R+    S  +L T+ +DL LLH   CW G     +   W++AW  L      GK+R++GVSNFN   LR L           P VVQNW DP H+D  +R  C  + + Y +YS  G Q    G    GN  L +PVI  IA +    PA VVLSWALQ G+ V+PR+ +  ++  NA+L   G  D L VFL+  D+  I++L
Sbjct:    4 EDDACVNP--IPATFNLTNGVRVPLLGFGLAGLGDGTKGVVEHAVEAGFTHFDSAQAQEWYNEAGLGQALEGMDDSA-------------RSALFLVTKLHPRDYLPKARAREALQASPRNLGTEVIDLVLLHRPNCWYGSCEDAKKDPWKDAWEVLQEWYLAGKVRAIGVSNFNTAQLRELWVMGGLPGGVRPHVVQNWMDPYHQDRAVRRWCKENGVLYTAYSQFGAQWQYMGVGVEGNVALADPVIVEIAEKHQVHPAMVVLSWALQEGISVIPRSSKQENIRANAKLF--GPDDTLLVFLAPEDVEKINSL 301

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: C1DYI8_MICCC (Aldo_ket_red domain-containing protein n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1DYI8_MICCC)

HSP 1 Score: 208 bits (530), Expect = 1.130e-61
Identity = 134/306 (43.79%), Postives = 173/306 (56.54%), Query Frame = 1

Query:  100 PHVPATFTLNDGNTMPRVGYGTAGLGESVTMNVLTALKAGFRHIDSAQAYEWYNERGVGAALLKASEEGEVIFIRTPRKCIPRDSIFVTSKLHPRDFGA-RTRKQFHESLHDLQTDYVDLFLLHYAECWSGLHCPG-EP-GTWQEAWAALGALQAEGKIRSLGVSNFNPDDLRALIAAAQRGDAPMPAVVQNWFDPLHRDAEIRAICAAHNITYVSYSTLGTQHPGRGG--NPVLTNPVIKAIAARQGTSPARVVLSWALQSGVGVLPRAGRAAHVEDNAQLLTGGGGDALAVFLSAADMAAIDAL 1002
            P       LN G+ MP VG+GTAGLG+        AL+AG+R +D+AQA EWY E  VG A+      G             R+ +F+TSKLHPRD GA R +     SL +L  DY+DLFLLHY  CW  L C G EP GTW+++W AL  LQ  GK+RS+GVSNF+ ++LR L   A+      PAVVQ   D    D E R +C +    Y +YS+LG+Q   RG   NPVLT+  +K IA ++G SPA+VVL WA+Q G  V+PR+   A + +N         D     L   DM A+DAL
Sbjct:   28 PRAIGNVVLNSGHAMPLVGFGTAGLGDMTATATKWALQAGYRLVDTAQAPEWYREDLVGEAIRAFLASGGAT----------REELFITSKLHPRDHGAERAKAMLESSLTNLGVDYLDLFLLHYPACWGTL-CGGVEPQGTWRDSWRALEELQRAGKVRSIGVSNFDVNELRELAEWAR----VEPAVVQRNSDIFSADKEARQLCESKRWQYEAYSSLGSQWLMRGHRENPVLTHADVKRIARKKGKSPAQVVLRWAIQHGQIVIPRSSNRARIAENL--------DVAGWTLGDDDMFALDAL 310

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A8J9S0C9_9CHLO (Probable 9,11-endoperoxide prostaglandin H2 reductase at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S0C9_9CHLO)

HSP 1 Score: 214 bits (546), Expect = 6.860e-61
Identity = 134/304 (44.08%), Postives = 171/304 (56.25%), Query Frame = 1

Query:  106 VPATFTLNDGNTMPRVGYGTAGLGESVTMNVLTALKAGFRHIDSAQAYEWYNERGVGAALLKASEEGEVIFIRTPRKCIPRDSIFVTSKLHPRDFGA-RTRKQFHESLHDLQTDYVDLFLLHYAECWSGLHCPG--EPGTWQEAWAALGALQAEGKIRSLGVSNFNPDDLRALIAAAQRGDAPMPAVVQNWFDPLHRDAEIRAICAAHNITYVSYSTLGTQHPGRG--GNPVLTNPVIKAIAARQGTSPARVVLSWALQSGVGVLPRAGRAAHVEDNAQLLTGGGGDALAVFLSAADMAAIDAL 1002
            VP T TLN+G  MPRVG+GTAGLG +     + AL +G+R +DSAQA EWY E  VG A+LK+               +PR+ +F+TSKLHPR  G      QF  SL  L  + VDLFLLHY  CW GL   G    GTW ++W AL  L  +G +R++GVSNF  D+L  L+A A+      PA+VQ   DPL  DAE++A C    I Y  YSTLG+Q    G   NPVLT+  ++ IA   G   A+VVL WALQ G  ++PR+ +   +  N +L            LSA  M  IDAL
Sbjct:  342 VPETVTLNNGVVMPRVGFGTAGLGAATEEATMWALASGYRLLDSAQAQEWYREDLVGLAVLKSG--------------VPREQVFLTSKLHPRHHGRDEAMIQFTRSLSGLAVEEVDLFLLHYPACWPGLCGEGFTPKGTWHDSWRALEDLVDKGLVRAIGVSNFGIDELAELLAMARI----KPALVQRHSDPLAADAEVQAFCRIAGIQYQGYSTLGSQWLSMGMEDNPVLTHAAVERIANETGRDAAQVVLRWALQHGQAIVPRSSKKERIAANREL---------DFVLSADQMQRIDAL 618

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A250WZA3_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250WZA3_9CHLO)

HSP 1 Score: 216 bits (549), Expect = 1.410e-60
Identity = 128/284 (45.07%), Postives = 168/284 (59.15%), Query Frame = 1

Query:  112 ATFTLNDGNTMPRVGYGTAGLGESVTMNVLTALKAGFRHIDSAQAYEWYNERGVGAALLKASEEGEVIFIRTPRKCIPRDSIFVTSKLHPRDFGAR-TRKQFHESLHDLQTDYVDLFLLHYAECWSGLH-CPGEPGT-----WQEAWAALGALQAEGKIRSLGVSNFNPDDLRALIAAAQRGDAPMPAVVQNWFDPLHRDAEIRAICAAHNITYVSYSTLGTQHPGRGGNPVLTNPVIKAIAARQGTSPARVVLSWALQSGVGVLPRAGRAAHVEDNAQLLTGG 942
            A+  LN+G  MP +G+GTAGLG    M V  AL AG+RH D+AQA EWY E  VGAA+ +    G   F R+         +F+T+K+HP+  G   T + F  SL +L+T+YVDL LLHY  CW+GL  CP + G      W+E+W AL  L  E K R++GVSNFN  ++  LI+        MP V+Q   DPL  +  +  +C    I   +YS+LGTQH G  GNPVL N VIK IA     SPA+VVL WALQ G+ VLPR+  A H+++N  L + G
Sbjct:  448 ASVVLNNGVLMPVIGFGTAGLGAQTVMAVQDALHAGYRHFDTAQAREWYLEEDVGAAIDEVLVSGSAEFSRS--------DLFLTTKIHPKHLGYNLTLEIFDSSLRNLRTNYVDLVLLHYPRCWNGLAGCPSDFGITQSDLWKESWKALEKLYTEKKTRAIGVSNFNVKEVLDLISDPSL--RVMPQVLQVNVDPLSPNTGLVDLCRNKGIQLEAYSSLGTQHLGASGNPVLGNAVIKDIAHTLSRSPAQVVLRWALQKGLVVLPRSSNAQHMQENLDLFSFG 721

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A835YG77_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YG77_9CHLO)

HSP 1 Score: 211 bits (536), Expect = 2.390e-60
Identity = 125/277 (45.13%), Postives = 167/277 (60.29%), Query Frame = 1

Query:  112 ATFTLNDGNTMPRVGYGTAGLGESVTMNVLTALKAGFRHIDSAQAYEWYNERGVGAALLKASEEGEVIFIRTPRKCIPRDSIFVTSKLHPRDFGAR-TRKQFHESLHDLQTDYVDLFLLHYAECWSGLHCPGEP--GTWQEAWAALGALQAEGKIRSLGVSNFNPDDLRALIAAAQRGDAPMPAVVQNWFDPLHRDAEIRAICAAHNITYVSYSTLGTQHPGRGGNPVLTNPVIKAIAAR-QGTSPARVVLSWALQSGVGVLPRAGRAAHVEDNAQL 930
            AT  LN+G  MP +GYG+A L +     V  ALKAG+RHIDSAQA EWY E  VG AL          F+   +  + R+ IF+TSKLHPR  G + T +Q +++L DL T YVDLFLLHY ECW  L C G+   GT+ ++W AL  +   G +R++GVSNF+P  L++LI  A+      P ++Q   DPL+   E++ +C    I   +YSTLGTQ+ G   NPVLTNPV+  I    +G S A+V L WALQ G+ VLPR+     +  N Q+
Sbjct:  239 ATLRLNNGVRMPTIGYGSAALTDRTDEAVGWALKAGYRHIDSAQAREWYREDLVGKALQA--------FLERHQATVRREDIFITSKLHPRHHGFKSTLRQMNQTLVDLHTGYVDLFLLHYPECWGDL-CGGDKPEGTYLDSWRALEKMYEAGIVRAIGVSNFSPSQLQSLIQRAR----VKPQILQVNVDPLNHQDELQELCRTQGIALTAYSTLGTQYGGA-KNPVLTNPVLMQIGEEAEGRSTAQVSLRWALQQGLVVLPRSSNQGRIALNLQM 501

[Close]

BLAST of jgi.p|Trimin1|178256 vs. uniprot
Match: A0A1D2A9K6_AUXPR (ShKT domain-containing protein n=4 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A9K6_AUXPR)

HSP 1 Score: 209 bits (532), Expect = 2.630e-60
Identity = 129/305 (42.30%), Postives = 178/305 (58.36%), Query Frame = 1

Query:  106 VPATFTLNDGNTMPRVGYGTAGLGESVTMNVLTALKAGFRHIDSAQAYEWYNERGVGAALLKASEEGEVIFIRTPRKCIPRDSIFVTSKLHPRDFGA-RTRKQFHESLHDLQTDYVDLFLLHYAECWSGLHCPG--EPGTWQEAWAALGALQAEGKIRSLGVSNFNPDDLRALIAAAQRGDAPMPAVVQNWFDPLHRDAEIRAICAAHNITYVSYSTLGTQHPGRGGNPVLTNPVIKAIAARQ---GTSPARVVLSWALQSGVGVLPRAGRAAHVEDNAQLLTGGGGDALAVFLSAADMAAIDAL 1002
            VP    +  G  MP +G+GTAGLG++    V +AL  G+R +DSAQA EWY E  VG  L  +               +PR  +F+TSKLHPR+ G   T     +SL DL+TDY+DLFLLHY +C +GL CPG    GTWQ++WAAL  L AEG +R++GV+NF+   L AL  AA+      PA+VQ   +P    A +RA C  H + + +YS+LGTQ   RG   +L +PV++ +AA     G +PA+V+L+WAL+ G  V+PR+   AH  +N          A  + LSAA+M  +D L
Sbjct:  187 VPEQVEIAPGVWMPTIGFGTAGLGDATAEAVASALANGYRLLDSAQAREWYREDLVGEGLAASG--------------VPRSQVFLTSKLHPRNLGYWNTLSMVRQSLADLRTDYLDLFLLHYPDCGAGL-CPGLNPEGTWQDSWAALEELAAEGLVRAIGVANFDVVQLEALRLAARTP----PALVQTGMEPRDPGAAVRAWCRRHGVRHQAYSSLGTQ---RGAAALLGHPVVRGVAAAHADAGATPAQVLLAWALRHGSAVVPRSASPAHQRENLA--------AARLALSAAEMQDLDGL 461

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|178256 vs. uniprot
BLAST of jgi.p|Trimin1|178256 vs. uniprot

BLAST of jgi.p|Trimin1|178256 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835ZB42_9STRA	6.300e-94	100.00	PPR_long domain-containing protein n=1 Tax=Tribone...	[more]
A0A835Z5Z3_9STRA	8.890e-59	81.82	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YWM4_9STRA	2.720e-56	73.68	Smr domain-containing protein n=1 Tax=Tribonema mi...	[more]
A0A835Z1B2_9STRA	2.540e-50	80.00	PPR_long domain-containing protein n=1 Tax=Tribone...	[more]
A0A836CK12_9STRA	4.430e-49	78.10	PPR_long domain-containing protein (Fragment) n=1 ...	[more]
A0A836CLV8_9STRA	1.170e-47	73.64	PPR_long domain-containing protein n=1 Tax=Tribone...	[more]
A0A835YW77_9STRA	1.750e-39	73.96	PPR_long domain-containing protein n=1 Tax=Tribone...	[more]
A0A836CEM5_9STRA	3.060e-36	57.02	PPR_long domain-containing protein n=1 Tax=Tribone...	[more]
A0A836CIT7_9STRA	6.340e-36	70.33	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YWR0_9STRA	4.940e-31	51.24	PPR_long domain-containing protein (Fragment) n=1 ...	[more]

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BLAST of jgi.p|Trimin1|178256 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CIZ5_9STRA	3.820e-244	100.00	Aldo/Keto reductase n=1 Tax=Tribonema minus TaxID=...	[more]
A0A6H5KUT1_9PHAE	5.780e-75	44.31	Aldo_ket_red domain-containing protein n=2 Tax=Ect...	[more]
A0A4D9D7R8_9STRA	4.100e-67	43.47	Aldo_ket_red domain-containing protein n=2 Tax=Mon...	[more]
I0YNU5_COCSC	2.680e-65	46.55	Aldo/keto reductase (Fragment) n=1 Tax=Coccomyxa s...	[more]
A0A7S2UWQ9_9STRA	6.380e-64	40.32	Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa...	[more]
C1DYI8_MICCC	1.130e-61	43.79	Aldo_ket_red domain-containing protein n=1 Tax=Mic...	[more]
A0A8J9S0C9_9CHLO	6.860e-61	44.08	Probable 9,11-endoperoxide prostaglandin H2 reduct...	[more]
A0A250WZA3_9CHLO	1.410e-60	45.07	Uncharacterized protein n=1 Tax=Chlamydomonas eust...	[more]
A0A835YG77_9CHLO	2.390e-60	45.13	Uncharacterized protein n=1 Tax=Edaphochlamys deba...	[more]
A0A1D2A9K6_AUXPR	2.630e-60	42.30	ShKT domain-containing protein n=4 Tax=Auxenochlor...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_167	contig	Contig_167:221584..221994 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|178256\|e_gw1.167.2.1
GOs	GO:0003674,GO:0003676,GO:0003723,GO:0003824,GO:0004518,GO:0004519,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0006139,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009451,GO:0009987,GO:0016070,GO:0016787,GO:0016788,GO:0034641,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044424,GO:0044464,GO:0046483,GO:0071704,GO:0090304,GO:0090305,GO:0097159,GO:1901360,GO:1901363
Description	Pentatricopeptide repeat-containing protein
COG category	S
Max annot lvl	35493\|Streptophyta
EggNOG OGs	KOG4197@1\|root,KOG4197@2759\|Eukaryota,37PZ2@33090\|Viridiplantae,3G870@35493\|Streptophyta
Evalue	8.64e-09
Seed ortholog	3988.XP_002523226.1
Hectar predicted targeting category	other localisation
TranscriptId	178578
Track	FilteredModels1
ProteinId	178256

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|178256	gene_16957	Tribonema minus UTEX_B_3156	gene	Contig_167 221584..221994 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_16957_1	exon_16957_1	Tribonema minus UTEX_B_3156	exon	Contig_167 221584..221994 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_16957	CDS_16957	Tribonema minus UTEX_B_3156	CDS	Contig_167 221584..221994 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|178256	Trimin1\|178256\|e_gw1.167.2.1	Tribonema minus UTEX_B_3156	polypeptide	Contig_167 221584..221994 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_167:221584..221994+
coding sequence from alignment at Contig_167:221584..221994+

spliced messenger RNA

>mRNA_16957 ID=mRNA_16957|Name=jgi.p|Trimin1|178256|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=411bp|location=Sequence derived from alignment at Contig_167:221584..221994+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAAGCCTTGGAGCTGCACGAGATGGAGCGGGAGGGGTTTGGCTGGAC
TCAACGTGCATGCAGCACTGTGCTGCTAGCGTGCGGCAAAGCGGGGCGGC
TCAATGCCGCACTGCAGCTGATTGACGAGATGGAAAAGCGCACCTTCAGC
CCTAACGATGTAGATTATCTCAAGCTCATTGAGGCATGTGTCCGCGGCAA
GAATGTGATTCGTGCTGGCGACAGGGGTGGCAGCAAGCAAGCCTTGGAGT
TCCTGCAGCGTATGCAAGACAAGGGTCCTGTGCCTGACATTCGGCATTAT
GCTGCTGCGATGAAGGTTTGCGTGACGGAGGGAGACTCGGCCAAAGCTGT
CAACATATTTCGGAGTATGCGAGATCAGGTGATCGTGATGAAAACATATG
TTTGCGTGTAG

protein sequence of jgi.p|Trimin1|178256

>Trimin1|178256|e_gw1.167.2.1 ID=Trimin1|178256|e_gw1.167.2.1|Name=jgi.p|Trimin1|178256|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=137bp
MQALELHEMEREGFGWTQRACSTVLLACGKAGRLNAALQLIDEMEKRTFS
PNDVDYLKLIEACVRGKNVIRAGDRGGSKQALEFLQRMQDKGPVPDIRHY
AAAMKVCVTEGDSAKAVNIFRSMRDQVIVMKTYVCV*

mRNA from alignment at Contig_167:221584..221994+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_16957 ID=mRNA_16957|Name=jgi.p|Trimin1|178256|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=411bp|location=Sequence derived from alignment at Contig_167:221584..221994+ (Tribonema minus UTEX_B_3156 )
ATGCAAGCCTTGGAGCTGCACGAGATGGAGCGGGAGGGGTTTGGCTGGAC
TCAACGTGCATGCAGCACTGTGCTGCTAGCGTGCGGCAAAGCGGGGCGGC
TCAATGCCGCACTGCAGCTGATTGACGAGATGGAAAAGCGCACCTTCAGC
CCTAACGATGTAGATTATCTCAAGCTCATTGAGGCATGTGTCCGCGGCAA
GAATGTGATTCGTGCTGGCGACAGGGGTGGCAGCAAGCAAGCCTTGGAGT
TCCTGCAGCGTATGCAAGACAAGGGTCCTGTGCCTGACATTCGGCATTAT
GCTGCTGCGATGAAGGTTTGCGTGACGGAGGGAGACTCGGCCAAAGCTGT
CAACATATTTCGGAGTATGCGAGATCAGGTGATCGTGATGAAAACATATG
TTTGCGTGTAG

Coding sequence (CDS) from alignment at Contig_167:221584..221994+

>mRNA_16957 ID=mRNA_16957|Name=jgi.p|Trimin1|178256|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=411bp|location=Sequence derived from alignment at Contig_167:221584..221994+ (Tribonema minus UTEX_B_3156 )
ATGCAAGCCTTGGAGCTGCACGAGATGGAGCGGGAGGGGTTTGGCTGGAC
TCAACGTGCATGCAGCACTGTGCTGCTAGCGTGCGGCAAAGCGGGGCGGC
TCAATGCCGCACTGCAGCTGATTGACGAGATGGAAAAGCGCACCTTCAGC
CCTAACGATGTAGATTATCTCAAGCTCATTGAGGCATGTGTCCGCGGCAA
GAATGTGATTCGTGCTGGCGACAGGGGTGGCAGCAAGCAAGCCTTGGAGT
TCCTGCAGCGTATGCAAGACAAGGGTCCTGTGCCTGACATTCGGCATTAT
GCTGCTGCGATGAAGGTTTGCGTGACGGAGGGAGACTCGGCCAAAGCTGT
CAACATATTTCGGAGTATGCGAGATCAGGTGATCGTGATGAAAACATATG
TTTGCGTGTAG