mRNA_16950 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|178236
Unique NamemRNA_16950
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: A0A835Z8Y7_9STRA (Tic22-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8Y7_9STRA)

HSP 1 Score: 575 bits (1482), Expect = 3.240e-207
Identity = 292/292 (100.00%), Postives = 292/292 (100.00%), Query Frame = 1
Query:    1 MAAPDQQPQHTPQRRLRLKKRLAQVAAGFAVATAGAPALSQGIRSGHSTSGQVLSEVLMPSAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYLNIKETGGQQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIKHPRATGMVNDMGQPETIEFRFHEAVHPREKMELYRVQDKQGAAVPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMESDPTKHTDFGFVPAGSSVEAIKEVRGQHGTRARPMYRLFSY 876
            MAAPDQQPQHTPQRRLRLKKRLAQVAAGFAVATAGAPALSQGIRSGHSTSGQVLSEVLMPSAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYLNIKETGGQQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIKHPRATGMVNDMGQPETIEFRFHEAVHPREKMELYRVQDKQGAAVPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMESDPTKHTDFGFVPAGSSVEAIKEVRGQHGTRARPMYRLFSY
Sbjct:    1 MAAPDQQPQHTPQRRLRLKKRLAQVAAGFAVATAGAPALSQGIRSGHSTSGQVLSEVLMPSAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYLNIKETGGQQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIKHPRATGMVNDMGQPETIEFRFHEAVHPREKMELYRVQDKQGAAVPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMESDPTKHTDFGFVPAGSSVEAIKEVRGQHGTRARPMYRLFSY 292          
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: D7FZH1_ECTSI (Tic22-like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZH1_ECTSI)

HSP 1 Score: 171 bits (432), Expect = 6.910e-47
Identity = 103/270 (38.15%), Postives = 157/270 (58.15%), Query Frame = 1
Query:   55 KKRLAQVAAGFAVATAGAPALS-------QGIRSGHSTSGQVLSEVLMPSAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYLNIKETGG-QQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIKH-PRATGMVNDMGQPETIEFRFHEAVHPREKMELYRVQDKQGAA---VPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMESDPTKHTDFGFVPAGSSVEAIKEVR 828
            ++ LA+ AA  A  T GA ALS         + S    +  V     M SAEASV + F +RT++EKLAN+PAF + N+ G+ YL+  E G  Q  +FFT+ +DA +ML EM+Q      +ARIL++ ++KA+ M+K  P+ TG  ND G  E ++F+    +H  +K     +     AA   VPVFY  GL + ++G  VKP+F D  +L++AW KAA ++P+MP  P ++V+N+P++++ ME    +   FGF  +    E IK+ R
Sbjct:  104 RRSLARGAASLATFTVGATALSGMSADVQHRLNSRDGAAVVVSIPAAMESAEASVLRPFEKRTVEEKLANLPAFMVTNKKGSPYLSPTEPGEPQMAVFFTNVDDAKEMLMEMVQESTYQNEARILVVSMEKAYGMVKAGPKLTGYQNDEGVDERMDFKLEPDMHSFQKARRLGLDVSPAAANIDVPVFYVEGLEVKRDGGLVKPLFMDPADLVEAWKKAAASNPDMPAEPTVKVFNMPDVIVAMELTD-EFNQFGFFASTEGAEFIKQAR 372          
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: R7QF31_CHOCR (Uncharacterized protein n=1 Tax=Chondrus crispus TaxID=2769 RepID=R7QF31_CHOCR)

HSP 1 Score: 115 bits (289), Expect = 2.930e-27
Identity = 80/227 (35.24%), Postives = 125/227 (55.07%), Query Frame = 1
Query:  181 SAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYL-NIKETGGQQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIK-HPRATGMVNDMGQPETIEFRFH---EAVHPREKMELYRVQDKQGAAVPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMESDPTKHT-DFGFVPAGSSVEAI-KEVRGQHG 840
            +A A    KF+++T+ EKL+ VP FA+ N  G  YL N+  +G Q G+ F S  DA +ML +M ++PG + DAR+ I+ LDKA++M+K  P+ +G+    G+  T+ FRF    + V   E ++    + +    +PVF A GLT+ K    V P+F   ++L  AW K   ++ ++P    + V NL  ++  MESD      + GF    +SVE + KE  G  G
Sbjct:   13 AAPAFAAAKFSKKTVSEKLSQVPVFAVTNASGQPYLANMDGSGSQIGLIFFSHHDALNMLKDMKKNPGAS-DARVYIMGLDKAYEMVKAKPQPSGIRGAAGEELTMVFRFFPDSKQVKAAEGLQRKLRRRRGVEGIPVFVAKGLTLRKGSENVVPLFLTKEDLDSAWSKLRDSNKDLPNNASVVVGNLLYIIQQMESDGEPELRNLGFFAPKASVEYVTKEQAGPTG 238          
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: A0A7J7IP27_9RHOD (Uncharacterized protein n=1 Tax=Cyanidiococcus yangmingshanensis TaxID=2690220 RepID=A0A7J7IP27_9RHOD)

HSP 1 Score: 112 bits (280), Expect = 5.440e-25
Identity = 79/237 (33.33%), Postives = 122/237 (51.48%), Query Frame = 1
Query:  205 KFNQRTLKEKLANVPAFAIVNRGGNFYLNIKETGGQQGMFFTSFEDANDMLFEMLQSPGLNG-DARILIIPLDKAFDMIKH-PRATGMVNDMGQPETIEFRFHEAVHPREKMELYRVQDKQGAA--VPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMES--------DPTKHTDF---GFVPAGSSVE-----AIKEVRGQHGTRARP 855
            +++++TL EKLA VP FA+ N  G  +L   E G Q G+ F    DA  ML ++ +S G    DARI ++ LD+AF+M+K  P+ +G+    G    + FRF+      E       + KQ     VP F A GLT+ K    V PVF D ++L DAW +  +   ++P+ P+++V +L E++L +E         D  +  D     F P+  SVE     ++K+ +G     ARP
Sbjct:  134 RYSRKTLDEKLAQVPVFAVTNESGQPFLAAMERGTQVGLIFFDPSDAMKMLEDLKRSSGKEAEDARIFVMGLDRAFEMVKSKPQPSGLRGPRGDELKMVFRFYPNQQQVEHARSLARKTKQPLVRGVPCFVAKGLTLRKGKEFVIPVFLDKRDLEDAWSRLRQDMSDLPKHPEVEVGDLIEVILRLEEAAKNPKSLDEKELQDIRRVAFFPSSKSVEFMKQESMKQFKGTARMHARP 370          
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: M1URJ3_CYAM1 (Similar to chloroplast inner membrane protein Tic22 n=1 Tax=Cyanidioschyzon merolae (strain NIES-3377 / 10D) TaxID=280699 RepID=M1URJ3_CYAM1)

HSP 1 Score: 111 bits (278), Expect = 9.280e-25
Identity = 83/254 (32.68%), Postives = 128/254 (50.39%), Query Frame = 1
Query:  154 QVLSEVLMPSAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYLNIKETGGQQGMFFTSFEDANDMLFEMLQSPGLNG-DARILIIPLDKAFDMIKH-PRATGMVNDMGQPETIEFRFHEAVHPREKMELYRVQDKQGAA--VPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMES--------DPTKHTDF---GFVPAGSSVE-----AIKEVRGQHGTRARP 855
            QVL      SA  +   +++++TL EKLA VP FA+ N  G  +L   E G Q G+ F   +DA  ML ++ +S G    DARI I+ LD+AF+M+K  P+ +G+    G    + FRF+      E       + KQ     VP F A GLT+ K    V P+F D ++L +AW +  +    +P+ P+I+V +L E++L +E         + T+  D     F P+  SVE     + K+ +G     +RP
Sbjct:  109 QVLLGAPAVSAAKTPHARYSRKTLSEKLAQVPVFAVTNESGQPFLAAMERGLQVGLIFFDPDDAIKMLEDLKRSSGKEAEDARIFIMGLDRAFEMVKSKPQPSGLRGPRGDELKMVFRFYPNQQQLEYARTVAKKTKQPTVRGVPCFVAKGLTLRKGKEFVIPIFLDKRDLDEAWNRLRQELAELPKQPEIEVGDLIEVILRLEEAAKNPKSLNETELQDLRRVAFFPSSKSVEFMKRESAKQFKGTARMHSRP 362          
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: A0A6H5L2Q1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2Q1_9PHAE)

HSP 1 Score: 93.2 bits (230), Expect = 8.750e-19
Identity = 59/146 (40.41%), Postives = 87/146 (59.59%), Query Frame = 1
Query:   49 RLKKRLAQVAAGFAVATAGAPALS-------QGIRSGHSTSGQVLSEVLMPSAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYLNIKETGG-QQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIKH-PRATG 459
            R ++ LA+ AA  A  T GA ALS         + S    +  V     M SAEASV + F +RT++EKLAN+PAF + N+ G+ YL+  + G  Q  +FFT+ +DA +ML EM+Q      +ARIL++ ++KA+ M+K  P+ TG
Sbjct:  102 RARRSLARGAASLATFTVGATALSGMSADVQHRLNSRDGAAVVVSIPAAMESAEASVLRPFEKRTVEEKLANLPAFMVTNKKGSPYLSPTKPGEPQMAVFFTNVDDAKEMLMEMVQESTYQNEARILVVSMEKAYGMVKAGPKLTG 247          
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: A0A2V3IZ91_9FLOR (Protein TIC 22, chloroplastic n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IZ91_9FLOR)

HSP 1 Score: 86.3 bits (212), Expect = 1.320e-16
Identity = 62/186 (33.33%), Postives = 99/186 (53.23%), Query Frame = 1
Query:  301 TGGQQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIK-HPRATGMVNDMGQPETIEFRFH---EAVHPREKMELYRVQDKQGAAVPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMESDPTKHT-DFGFVPAGSSVEAI-KEVRGQHG 840
            +G Q G+ F S  DA +ML +M ++PG + DAR+ I+ LDKA++M+K  P  +G+    G+  T+ FRF+   + V   E ++           VPVF A GLT+ K    + P+F   ++L  +W K  +++ ++P    + V NL  ++  MESD      + GF    +SVE + KE  G  G
Sbjct:    4 SGSQIGLIFFSHLDALNMLKDMQKNPGAS-DARVYIMGLDKAYEMVKAKPTPSGIRGSGGEEMTMVFRFYPDSKQVKAAEGLQRKMRLSSSVQGVPVFVAKGLTLRKGNENIVPLFLTKEDLDASWAKLRESNKHLPNSAPVAVGNLLYIIQQMESDEQPQLRNLGFFAPRASVEYVSKEQAGPTG 188          
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: A0A6H5L2U4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2U4_9PHAE)

HSP 1 Score: 82.4 bits (202), Expect = 1.410e-15
Identity = 43/124 (34.68%), Postives = 71/124 (57.26%), Query Frame = 1
Query:  466 NDMGQPETIEFRFHEAVHPREKMELYRVQDKQGAA---VPVFYAGGLTIVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLMESDPTKHTDFGFVPAGSSVEAIKEVR 828
            ND G  E ++F+    +H  +K     +     AA   +PVFYA GL + ++G  VKP+F D  +L++AW KA  ++P+MP  P ++V+N+P++++ ME    +   FGF  +    E IK+ R
Sbjct:   23 NDDGVDEMMDFKLEPDMHSFQKARRLGLDVSPAAANTDIPVFYAEGLEVKRDGGLVKPLFMDPADLVEAWKKATASNPDMPAEPTVKVFNMPDVIVAMELTD-EFNQFGFFASTEGAEFIKQAR 145          
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Match: A0A1X6NSW5_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NSW5_PORUM)

HSP 1 Score: 80.1 bits (196), Expect = 1.270e-13
Identity = 57/148 (38.51%), Postives = 78/148 (52.70%), Query Frame = 1
Query:  232 KLANVPAFAIVNRGGNFYL-NIKETGGQQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIK-HPRATGMVNDMGQPETIEFRFH-EAVHPREKMELYRVQDKQG----AAVPVFYAGGLTIVKEGVKVKPVFFDVKEL 654
            KLA VP FA+ N GG  YL N+   G Q G+ F S E+A  M  +M +SP    DAR+ I+ LDKA++M+K  P  +G+    G+   + FRF  +         L R     G    A VPVF A GLT+ K G  V P+F   +++
Sbjct:  123 KLAQVPVFAVTNAGGQPYLANVDGAGTQVGLIFFSHEEALSMQADMQKSP-TTADARVYIMGLDKAYEMVKAKPTPSGIRGPAGEELRMVFRFSPDRKQVGHAARLLRAVPIGGGGETAGVPVFAAPGLTLRKAGEPVVPLFLAKEDM 269          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|178236 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 9
Match NameE-valueIdentityDescription
A0A835Z8Y7_9STRA3.240e-207100.00Tic22-like protein n=1 Tax=Tribonema minus TaxID=3... [more]
D7FZH1_ECTSI6.910e-4738.15Tic22-like n=1 Tax=Ectocarpus siliculosus TaxID=28... [more]
R7QF31_CHOCR2.930e-2735.24Uncharacterized protein n=1 Tax=Chondrus crispus T... [more]
A0A7J7IP27_9RHOD5.440e-2533.33Uncharacterized protein n=1 Tax=Cyanidiococcus yan... [more]
M1URJ3_CYAM19.280e-2532.68Similar to chloroplast inner membrane protein Tic2... [more]
A0A6H5L2Q1_9PHAE8.750e-1940.41Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A2V3IZ91_9FLOR1.320e-1633.33Protein TIC 22, chloroplastic n=1 Tax=Gracilariops... [more]
A0A6H5L2U4_9PHAE1.410e-1534.68Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A1X6NSW5_PORUM1.270e-1338.51Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_167contigContig_167:175446..177813 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|178236|e_gw1.167.79.1
DescriptionTic22-like family
COG categoryS
Max annot lvl2759|Eukaryota
EggNOG OGs2DZXZ@1|root,2S7E9@2759|Eukaryota
Evalue1.13e-47
Seed ortholog2880.D7FZH1
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionTic22-like
Ec32 orthologEc-23_002870.1
TranscriptId178558
TrackFilteredModels1
ProteinId178236
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178236gene_16950Tribonema minus UTEX_B_3156 geneContig_167 175446..177813 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_16950_1exon_16950_1Tribonema minus UTEX_B_3156 exonContig_167 175446..175593 +
exon_16950_2exon_16950_2Tribonema minus UTEX_B_3156 exonContig_167 175727..176226 +
exon_16950_3exon_16950_3Tribonema minus UTEX_B_3156 exonContig_167 177583..177813 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_16950CDS_16950Tribonema minus UTEX_B_3156 CDSContig_167 175446..175593 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|178236Trimin1|178236|e_gw1.167.79.1Tribonema minus UTEX_B_3156 polypeptideContig_167 175446..177813 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_16950 ID=mRNA_16950|Name=jgi.p|Trimin1|178236|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=879bp|location=Sequence derived from alignment at Contig_167:175446..177813+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGGCTGCGCCAGACCAACAACCACAACATACACCACAGAGGCGATTGCG
ATTGAAAAAGCGGCTGGCGCAGGTGGCTGCTGGGTTTGCCGTTGCCACCG
CTGGCGCACCAGCTCTGTCACAAGGCATCAGGTCGGGCCACAGCACATCG
GGCCAGGTGCTGTCGGAGGTGTTGATGCCATCGGCAGAGGCTTCCGTCTT
CAAGAAGTTCAACCAGAGGACGCTAAAGGAAAAGCTGGCGAACGTGCCTG
CCTTCGCAATAGTCAACAGGGGAGGCAACTTCTATCTCAACATCAAGGAG
ACGGGGGGGCAGCAGGGCATGTTCTTCACGTCCTTCGAGGACGCCAACGA
CATGCTCTTCGAGATGCTGCAGTCGCCGGGCTTGAACGGCGACGCTCGCA
TCCTGATCATACCCCTGGACAAGGCCTTTGACATGATCAAACACCCACGG
GCTACGGGCATGGTTAATGACATGGGGCAGCCGGAGACCATTGAGTTCCG
GTTTCACGAGGCGGTGCACCCGCGGGAGAAGATGGAGCTCTACAGGGTGC
AGGACAAACAAGGCGCTGCTGTGCCGGTGTTCTATGCGGGCGGGCTGACT
ATTGTTAAGGAGGGGGTGAAGGTCAAGCCGGTTTTCTTCGATGTCAAGGA
GCTTCTGGACGCCTGGTTCAAGGCCGCAAAGACGGACCCCAACATGCCGC
GCGTACCCGACATCCAGGTCTACAACCTCCCCGAATTGCTGCTGCTCATG
GAATCCGACCCTACCAAGCACACGGACTTTGGGTTTGTGCCAGCGGGCAG
CTCTGTGGAGGCGATAAAGGAAGTTAGGGGGCAGCACGGAACGCGCGCAC
GGCCCATGTACCGCCTGTTCTCGTACTAG
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protein sequence of jgi.p|Trimin1|178236

>Trimin1|178236|e_gw1.167.79.1 ID=Trimin1|178236|e_gw1.167.79.1|Name=jgi.p|Trimin1|178236|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=293bp
MAAPDQQPQHTPQRRLRLKKRLAQVAAGFAVATAGAPALSQGIRSGHSTS
GQVLSEVLMPSAEASVFKKFNQRTLKEKLANVPAFAIVNRGGNFYLNIKE
TGGQQGMFFTSFEDANDMLFEMLQSPGLNGDARILIIPLDKAFDMIKHPR
ATGMVNDMGQPETIEFRFHEAVHPREKMELYRVQDKQGAAVPVFYAGGLT
IVKEGVKVKPVFFDVKELLDAWFKAAKTDPNMPRVPDIQVYNLPELLLLM
ESDPTKHTDFGFVPAGSSVEAIKEVRGQHGTRARPMYRLFSY*
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mRNA from alignment at Contig_167:175446..177813+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_16950 ID=mRNA_16950|Name=jgi.p|Trimin1|178236|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2368bp|location=Sequence derived from alignment at Contig_167:175446..177813+ (Tribonema minus UTEX_B_3156 )
ATGGCTGCGCCAGACCAACAACCACAACATACACCACAGAGGCGATTGCG ATTGAAAAAGCGGCTGGCGCAGGTGGCTGCTGGGTTTGCCGTTGCCACCG CTGGCGCACCAGCTCTGTCACAAGGCATCAGGTCGGGCCACAGCACATGT TTACACCTGGCACCCTGCCGACACAACAAACATGCATGCATTCGCCTCGC GTAACTTGCAGTTGCTGTCGATTGTTATAACCATTCCCCTGCCTCGACAT CGCCTCAGGTCTCTGCTGCCTGATGCGGGAGCGGGCCAGGTGCTGTCGGA GGTGTTGATGCCATCGGCAGAGGCTTCCGTCTTCAAGAAGTTCAACCAGA GGACGCTAAAGGAAAAGCTGGCGAACGTGCCTGCCTTCGCAATAGTCAAC AGGGGAGGCAACTTCTATCTCAACATCAAGGAGACGGGGGGGCAGCAGGG CATGTTCTTCACGTCCTTCGAGGACGCCAACGACATGCTCTTCGAGATGC TGCAGTCGCCGGGCTTGAACGGCGACGCTCGCATCCTGATCATACCCCTG GACAAGGCCTTTGACATGATCAAACACCCACGGGCTACGGGCATGGTTAA TGACATGGGGCAGCCGGAGACCATTGAGTTCCGGTTTCACGAGGCGGTGC ACCCGCGGGAGAAGATGGAGCTCTACAGGGTGCAGGACAAACAAGGCGCT GCTGTGCCGGTGTTCTATGCGGGCGGGCTGACTATTGTTAAGGAGGGGGT GAAGGTCAAGCCGGTTTTCTTCGATGTCAAGGTGAGTTGGCAGCTTTTGC CGCCGGCGGTCCAATTACAGGCAGCGTAAGCTTGCAGACTTGCATGTGAT AAGTACGTGTGTGGATGCTGTGATTCATGGCAAGTTATGAGAACCTGTGG AGAATTGTGTTGGACAGTCGGCCAGCTGCTTCTGTGCACGCGGCAAATAT GCGATAAGTTGAGGTTGGCCATCAGCACTCTTGCGCGCTAGTGATGCTCA GGTAAGGTAACACCAAGGGTACCTCTGTTGGTGTGCTAATGAAGTTGAAG TTTTCAGTTCTACAGAGCTGCAGCTGTTATGGCTCTCAATGTGTTGCTCG CCAAAGGCAGTGGCAGTCATGTAATCACTGTACCAGCCAAATGCAGCAAA CACACATGCCATCAAGCGTGCAAAACATAGGCCAATTCTTGAATCATGAC AGATGACATCATGCCCTGACACGCATACGTCGGTGTTCTCCTCGCTGGCG CAGGTCAGTATGCAATTTCGAAGTACTATTGCGTAATGAGTCATGACTTT GGGGGCAGAGATTTAAAAGCACGCGAGGCACCAGATGGCCGCAAAGCGCA GGGCAAACCGCGATGATCACAAAGCTCATGCGAGCCGCACTTGATGCAAC TGCTGCACCAGGGTACTCCACTTGTGAGAGCGCCTTATGCTGCTGTCACA TTAATCCTTTTCTTTCAGTGTTCTAAGCTTTGAGCACTGTCATCATGCAT AGGCATAATCACTGTGGCAGTGCTCAGTTGCGTCTGCAGCATGATCACGC ATGTGCGCGGTGGTGAAAGCCCAGAAGTAGTGAACAAAGCATAGACGTTG CTTTTCGGTTGGCCAGCACTGTACTGACATTTGCAACGATGGGTGCAATG AATGGATGACTGTCACGAAACAAGAGGTATCGATTGAGTTTGATGAACGC TTGGTAGGCGGCTTGGCTGACTGCGCACAGCACCGCGCCGAACGCGCTGC TTTTCATCATCAGATCACTCACAAGACGCATCTAGCTGCTGATGTATGTA CGTGTCTATGTATATGCTGCAGCGCTCAGCATCTCCAAGTCTGTGGACAG CAGGTCTGGTGCTGTGCACAAGTGCCGTGCGCGTTGCGGTTGTTGTTGTT GTTGTGTGTGATGCTGACCTCAAACTGGGACACAAGAAATGGCATGTAGG TACTGTTGAAGTCTACCAAGCGCGGGCTTGGCAAGCGCAGAAGAGCAGAG ACCGCTTTTCAAAGTCTGCACTGCTCTTGCCCTCAATGACAACGCGTCAT TACAGCCGTTGTTGCAACACACCGCATGCTCATGGTGCGTAACTGTCATG TTTGTAACTGTCAACTGTCATGCGTGTCACTCCACAGGAGCTTCTGGACG CCTGGTTCAAGGCCGCAAAGACGGACCCCAACATGCCGCGCGTACCCGAC ATCCAGGTCTACAACCTCCCCGAATTGCTGCTGCTCATGGAATCCGACCC TACCAAGCACACGGACTTTGGGTTTGTGCCAGCGGGCAGCTCTGTGGAGG CGATAAAGGAAGTTAGGGGGCAGCACGGAACGCGCGCACGGCCCATGTAC CGCCTGTTCTCGTACTAG
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Coding sequence (CDS) from alignment at Contig_167:175446..177813+

>mRNA_16950 ID=mRNA_16950|Name=jgi.p|Trimin1|178236|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=879bp|location=Sequence derived from alignment at Contig_167:175446..177813+ (Tribonema minus UTEX_B_3156 )
ATGGCTGCGCCAGACCAACAACCACAACATACACCACAGAGGCGATTGCG
ATTGAAAAAGCGGCTGGCGCAGGTGGCTGCTGGGTTTGCCGTTGCCACCG
CTGGCGCACCAGCTCTGTCACAAGGCATCAGGTCGGGCCACAGCACATCG
GGCCAGGTGCTGTCGGAGGTGTTGATGCCATCGGCAGAGGCTTCCGTCTT
CAAGAAGTTCAACCAGAGGACGCTAAAGGAAAAGCTGGCGAACGTGCCTG
CCTTCGCAATAGTCAACAGGGGAGGCAACTTCTATCTCAACATCAAGGAG
ACGGGGGGGCAGCAGGGCATGTTCTTCACGTCCTTCGAGGACGCCAACGA
CATGCTCTTCGAGATGCTGCAGTCGCCGGGCTTGAACGGCGACGCTCGCA
TCCTGATCATACCCCTGGACAAGGCCTTTGACATGATCAAACACCCACGG
GCTACGGGCATGGTTAATGACATGGGGCAGCCGGAGACCATTGAGTTCCG
GTTTCACGAGGCGGTGCACCCGCGGGAGAAGATGGAGCTCTACAGGGTGC
AGGACAAACAAGGCGCTGCTGTGCCGGTGTTCTATGCGGGCGGGCTGACT
ATTGTTAAGGAGGGGGTGAAGGTCAAGCCGGTTTTCTTCGATGTCAAGGA
GCTTCTGGACGCCTGGTTCAAGGCCGCAAAGACGGACCCCAACATGCCGC
GCGTACCCGACATCCAGGTCTACAACCTCCCCGAATTGCTGCTGCTCATG
GAATCCGACCCTACCAAGCACACGGACTTTGGGTTTGTGCCAGCGGGCAG
CTCTGTGGAGGCGATAAAGGAAGTTAGGGGGCAGCACGGAACGCGCGCAC
GGCCCATGTACCGCCTGTTCTCGTACTAG
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