Trimin1|353504|estExt_Genemark1.C_Ctg_1660050 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353504
Unique NameTrimin1|353504|estExt_Genemark1.C_Ctg_1660050
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length173
Homology
BLAST of jgi.p|Trimin1|353504 vs. uniprot
Match: A0A835Z946_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z946_9STRA)

HSP 1 Score: 227 bits (578), Expect = 2.030e-73
Identity = 172/172 (100.00%), Postives = 172/172 (100.00%), Query Frame = 0
Query:    1 MERGRVSAACTLVLTGRLSVAAGRDEFPSDAGPWSVLAADALLSPEGHYKPDFSARVASDALRIVRMSRATFEVVKEAPVTPPATSPREADAVAVGRGDGGGSTAGGERXXSGXVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSTRRAQMKKPLLPR 172
            MERGRVSAACTLVLTGRLSVAAGRDEFPSDAGPWSVLAADALLSPEGHYKPDFSARVASDALRIVRMSRATFEVVKEAPVTPPATSPREADAVAVGRGDGGGSTAGGERXXSGXVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSTRRAQMKKPLLPR
Sbjct:    1 MERGRVSAACTLVLTGRLSVAAGRDEFPSDAGPWSVLAADALLSPEGHYKPDFSARVASDALRIVRMSRATFEVVKEAPVTPPATSPREADAVAVGRGDGGGSTAGGERXXSGXVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSTRRAQMKKPLLPR 172          
BLAST of jgi.p|Trimin1|353504 vs. uniprot
Match: A0A835ZG32_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG32_9STRA)

HSP 1 Score: 223 bits (568), Expect = 3.610e-66
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0
Query:    2 ERGRVSAACTLVLTGRLSVAAGRDEFPSDAGPWSVLAADALLSPEGHYKPDFSARVASDALRIVRMSRATFEVVKEAPVTPPATSPREADAVAVGRGDGGGSTAGGERXXSGXVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSTRRAQMKKPLLPR 172
             RGRVSAACTLVLTGRLSVAAGRDEFPSDAGPWSVLAADALLSPEGHYKPDFSARVASDALRIVRMSRATFEVVKEAPVTPPATSPREADAVAVGRGDGGGSTAGGERXXSGXVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSTRRAQMKKPLLPR
Sbjct:  517 RRGRVSAACTLVLTGRLSVAAGRDEFPSDAGPWSVLAADALLSPEGHYKPDFSARVASDALRIVRMSRATFEVVKEAPVTPPATSPREADAVAVGRGDGGGSTAGGERXXSGXVGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRSTRRAQMKKPLLPR 687          
BLAST of jgi.p|Trimin1|353504 vs. uniprot
Match: A0A835YX11_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX11_9STRA)

HSP 1 Score: 112 bits (279), Expect = 9.720e-26
Identity = 53/75 (70.67%), Postives = 64/75 (85.33%), Query Frame = 0
Query:    2 ERGRVSAACTLVLTGRLSVAAGRDEFPSDAGPWSVLAADALLSPEGHYKPDFSARVASDALRIVRMSRATFEVVK 76
             RGRVS ACTLVLTGRL+VAAGRD F S++GPWSVL ADALL+ EG Y+PDFSA ++SD LR++RM+RATF  +K
Sbjct:  397 RRGRVSTACTLVLTGRLTVAAGRDAFQSESGPWSVLGADALLAAEGAYRPDFSASISSDQLRVIRMNRATFAALK 471          
BLAST of jgi.p|Trimin1|353504 vs. uniprot
Match: D8LQ70_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQ70_ECTSI)

HSP 1 Score: 96.7 bits (239), Expect = 4.250e-20
Identity = 46/74 (62.16%), Postives = 56/74 (75.68%), Query Frame = 0
Query:    2 ERGRVSAACTLVLTGRLSVAAGRDEFPSDAGPWSVLAADALLSPEGHYKPDFSARVASDALRIVRMSRATFEVV 75
             RGR S  CTL+LTG++ V AGRD F SDAGPW+VL ADAL+  EG YKPDFSA   S+ LR VR+S+A+F+ V
Sbjct:  449 RRGRTSTMCTLILTGKVVVLAGRDGFRSDAGPWTVLGADALVEDEGAYKPDFSAHAGSERLRCVRISKASFDTV 522          
BLAST of jgi.p|Trimin1|353504 vs. uniprot
Match: A0A7S2SUL8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SUL8_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.260e-16
Identity = 42/71 (59.15%), Postives = 53/71 (74.65%), Query Frame = 0
Query:    2 ERGRVSAACTLVLTGRLSVAAGRDEFPSDAGPWSVLAADALLSPEGHYKPDFSARVASDALRIVRMSRATF 72
             RGR S+  TLVL+GRL+V AG+D F SDAGPW+VL  DALL  EG Y PDF+A +A++ +R +RMSR  F
Sbjct:  488 RRGRASSTMTLVLSGRLAVVAGKDGFRSDAGPWTVLGCDALLQEEGGYIPDFTAYIATENVRCIRMSRFDF 558          
BLAST of jgi.p|Trimin1|353504 vs. uniprot
Match: A0A7S3ZR18_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZR18_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 3.810e-15
Identity = 40/71 (56.34%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    3 RGRVSAACTLVLTGRLSVAAGRDEFPSDAGPWSVLAADALLSPEGHYKPDFSARVASDALRIVRMSRATFE 73
            RG  ++  TLVL G+LSV AG D F ++AGPW+VL ADAL+S EG + PDFSA VA+D++R V ++RA +E
Sbjct:  497 RGEAASYATLVLNGKLSVLAGVDGFRAEAGPWTVLGADALVSDEGSFVPDFSAHVATDSVRCVHVTRAEYE 567          
BLAST of jgi.p|Trimin1|353504 vs. uniprot
Match: A0A7S3JS20_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JS20_9STRA)

HSP 1 Score: 73.6 bits (179), Expect = 4.620e-12
Identity = 35/61 (57.38%), Postives = 47/61 (77.05%), Query Frame = 0
Query:   12 LVLTGRLSVAAGRDEFPSDAGPWSVLAADALLSPEGHYKPDFSARVASDALRIVRMSRATF 72
            LVL G+L+V AG+D F S+AGPW+VL ADAL+S    Y+PDFSA VA+D +R+V + RA +
Sbjct:  561 LVLGGKLTVLAGKDGFRSEAGPWTVLGADALVSKAKEYRPDFSAHVATDTVRLVYIQRADY 621          
BLAST of jgi.p|Trimin1|353504 vs. uniprot
Match: A0A7S1B913_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1B913_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 1.160e-11
Identity = 36/73 (49.32%), Postives = 50/73 (68.49%), Query Frame = 0
Query:    2 ERGRVSAACTLVLTGRLSVAAGRDEFPSDAGPWSVLAADALLSPEGHYKPDFSARVASDALRIVRMSRATFEV 74
            ERG+ +  CTL+L G++++ AG+D F S+ GPWSVLAA AL++P   Y PDF A VAS+  R++R     F V
Sbjct:  489 ERGQETEVCTLLLNGKITILAGKDGFRSEVGPWSVLAAQALVAPG--YVPDFDAFVASEKCRMLRFQLPRFHV 559          
BLAST of jgi.p|Trimin1|353504 vs. uniprot
Match: A0A7J6RRC9_PEROL (Metal transporter cnnm2 n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6RRC9_PEROL)

HSP 1 Score: 69.3 bits (168), Expect = 1.290e-10
Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 0
Query:    2 ERGRVSAACTLVLTGRLSVAAGRDEFPSDAGPWSVLAADALLSPEGHYKPDFSARVASDALRIVRMSRATFEVVKE 77
             RG  +  C +VLTGRL+V AG D+F S+AG +SVLA +ALL     Y PDFSARV S+ +R +++SR  ++   E
Sbjct:  477 RRGVETDVCCIVLTGRLAVLAGHDKFRSEAGAFSVLAVEALL--HDGYAPDFSARVGSEKVRCIKISRPVYDEAVE 550          
BLAST of jgi.p|Trimin1|353504 vs. uniprot
Match: A0A7J6LAQ6_PEROL (Metal transporter cnnm2 n=3 Tax=Perkinsus olseni TaxID=32597 RepID=A0A7J6LAQ6_PEROL)

HSP 1 Score: 69.3 bits (168), Expect = 1.380e-10
Identity = 37/76 (48.68%), Postives = 51/76 (67.11%), Query Frame = 0
Query:    2 ERGRVSAACTLVLTGRLSVAAGRDEFPSDAGPWSVLAADALLSPEGHYKPDFSARVASDALRIVRMSRATFEVVKE 77
             RG  +  C +VLTGRL+V AG D+F S+AG +SVLA +ALL     Y PDFSARV S+ +R +++SR  ++   E
Sbjct:  711 RRGVETDVCCIVLTGRLAVLAGHDKFRSEAGAFSVLAVEALL--HDGYAPDFSARVGSEKVRCIKISRPVYDEAVE 784          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353504 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
A0A835Z946_9STRA2.030e-73100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZG32_9STRA3.610e-6699.42Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YX11_9STRA9.720e-2670.67Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LQ70_ECTSI4.250e-2062.16Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A7S2SUL8_9STRA1.260e-1659.15Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3ZR18_9STRA3.810e-1556.34Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S3JS20_9STRA4.620e-1257.38Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S1B913_9STRA1.160e-1149.32Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7J6RRC9_PEROL1.290e-1048.68Metal transporter cnnm2 n=3 Tax=Perkinsus olseni T... [more]
A0A7J6LAQ6_PEROL1.380e-1048.68Metal transporter cnnm2 n=3 Tax=Perkinsus olseni T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 79..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_166contigContig_166:333246..334139 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353504mRNA_13347Tribonema minus UTEX_B_3156 mRNAContig_166 332895..334139 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353504|estExt_Genemark1.C_Ctg_1660050 ID=Trimin1|353504|estExt_Genemark1.C_Ctg_1660050|Name=jgi.p|Trimin1|353504|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=173bp
MERGRVSAACTLVLTGRLSVAAGRDEFPSDAGPWSVLAADALLSPEGHYK
PDFSARVASDALRIVRMSRATFEVVKEAPVTPPATSPREADAVAVGRGDG
GGSTAGGERGGSGGVGGGGAWGVGGGGSESEVRIGEEADERVDEQGEEQV
EEEGEERRSTRRAQMKKPLLPR*
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