mRNA_13318 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|353492
Unique Name	mRNA_13318
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|353492 vs. uniprot
Match: A0A835Z5U3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5U3_9STRA)

HSP 1 Score: 342 bits (876), Expect = 2.650e-116
Identity = 188/199 (94.47%), Postives = 188/199 (94.47%), Query Frame = 2

Query:   68 MKFLVLCLAVXXXXXXXFVACPTSSRLVASNTCSRSASSLRMSXXXXDALTAAARAARKAGPNDRVVEIRKPLGLVLEENEKGDVFITKVKDNSNASRNPKVFPGDKISFISATFGDDLWSVRGAGLARVQNAVRVRQGDSVRLVLESTNESKSKIAAAAAEAKERKKYEEDAQVKRDRLLKALDEDTKKKSKKFFGLF 664
            MKFLVLCLAV       FVACPTSSRLVASNTCSRSASSLRMS    DALTAAARAARKAGPNDRVVEIRKPLGLVLEENEKGDVFITKVKDNSNASRNPKVFPGDKISFISATFGDDLWSVRGAGLARVQNAVRVRQGDSVRLVLESTNESKSKIAAAAAEAKERKKYEEDAQVKRDRLLKALDEDTKKKSKKFFGLF
Sbjct:    1 MKFLVLCLAVVVASAAAFVACPTSSRLVASNTCSRSASSLRMSDDDEDALTAAARAARKAGPNDRVVEIRKPLGLVLEENEKGDVFITKVKDNSNASRNPKVFPGDKISFISATFGDDLWSVRGAGLARVQNAVRVRQGDSVRLVLESTNESKSKIAAAAAEAKERKKYEEDAQVKRDRLLKALDEDTKKKSKKFFGLF 199

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BLAST of jgi.p|Trimin1|353492 vs. uniprot
Match: D8LTE7_ECTSI (PDZ domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTE7_ECTSI)

HSP 1 Score: 157 bits (396), Expect = 2.030e-43
Identity = 80/147 (54.42%), Postives = 116/147 (78.91%), Query Frame = 2

Query:  227 ARAARKAGPNDRVVEIRKPLGLVLEENEKGDVFITKVKDNSNASRNPKVFPGDKISFISATFGDDLWSVRGAGLARVQNAVRVRQGDSVRLVLESTNESKSKIAAAAAEAKERKKYEEDAQVKRDRLLKALDEDTK-KKSKKFFGLF 664
            ARAARK GPNDRVVE+RKP+GLVLEE+E+G+V+I ++   SNASR  ++  GDKI+F+SATFG+++WS +G GL+RVQ+A+R+R G +V+LVLE++ E++ K+A  +A  K  +  +E  + KRDRLL+ L +DTK +K K ++GLF
Sbjct:   72 ARAARKVGPNDRVVELRKPMGLVLEEDERGNVYIVEIVPGSNASRKKQINVGDKITFVSATFGEEIWSAQGVGLSRVQSAIRIRSGPTVKLVLETSKEAEKKMARDSARLKRLQDAKETEEDKRDRLLRELSDDTKVQKKKPWYGLF 218

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BLAST of jgi.p|Trimin1|353492 vs. uniprot
Match: A0A7S1DAB5_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DAB5_CYCTE)

HSP 1 Score: 133 bits (335), Expect = 2.170e-34
Identity = 75/147 (51.02%), Postives = 99/147 (67.35%), Query Frame = 2

Query:  227 ARAARKAGPNDRVVEIRKPLGLVLEENEKGDVFITKVKDNSNASRNPKVFPGDKISFISATFGDDLWSVRGAGLARVQNAVRVRQGDSVRLVLESTNESKSKIAAAAAEAKERKKYEEDAQVKRDRLLKALDEDTKKKS-KKFFGLF 664
            AR +R A   DRVVE+ +PLGLVL ++EKG+V++  V    NA+R  KV  GD ++  SATFGD +WS RG GL RV NA++VR G +V+LVLE+  ESK K A  A + K  ++    AQ KRD LL  L++D K+ + KKFFGLF
Sbjct:   68 ARESRSADVGDRVVELVRPLGLVLNQDEKGNVYVETVAPRGNAARTGKVKEGDIVTMCSATFGDQMWSTRGVGLNRVLNAIKVRSGATVKLVLENPQESKQKAAMTAKQIKAAEEARRAAQAKRDELLNELEQDEKRLNPKKFFGLF 214

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BLAST of jgi.p|Trimin1|353492 vs. uniprot
Match: A0A6U1P4I4_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A6U1P4I4_9STRA)

HSP 1 Score: 132 bits (333), Expect = 2.840e-34
Identity = 84/195 (43.08%), Postives = 114/195 (58.46%), Query Frame = 2

Query:   68 MKFLVLCLAVXXXXXXXFVACPTSSRLVASNTCSRSASSLRMSXXXXDALTAAARAARKAGPNDRVVEIRKPLGLVLEENEKGDVFITKVKDNSNASRNPKVFPGDKISFISATFGDDLWSVRGAGLARVQNAVRVRQGDSVRLVLESTNESKSKIAAAAAEAKERKKYEEDAQVKRDRLLKALD--EDTKKKSK 646
            MKF++  LA              ++ L  S   S S   ++MS    + L   +RA RK G NDRV E+ KPLG+VLEE+E+GDV++  V    NA+R  K+F GDK+  ISATFG+++WS RG G+  V NAV+VR G+SV++VLEST ESK K   AA  A E +      + K  +LL  LD  +D  +K K
Sbjct:    1 MKFVIYALAGLCSTLAVNAFISPAATLGRSLQTSTSVLPIKMSLSDDEELRKQSRALRKPGANDRVAEVNKPLGMVLEEDERGDVYVADVIPGGNAARTGKIFQGDKVVMISATFGEEVWSTRGVGIGSVMNAVKVRSGNSVKVVLESTAESKQKAQEAAMTAAEIRAARAAEEEKNRQLLAELDATDDALRKKK 195

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BLAST of jgi.p|Trimin1|353492 vs. uniprot
Match: A0A7S4IT66_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IT66_9STRA)

HSP 1 Score: 132 bits (333), Expect = 3.090e-34
Identity = 74/146 (50.68%), Postives = 99/146 (67.81%), Query Frame = 2

Query:  230 RAARKAGPNDRVVEIRKPLGLVLEENEKGDVFITKVKDNSNASRNPKVFPGDKISFISATFGDDLWSVRGAGLARVQNAVRVRQGDSVRLVLESTNESKSKIAAAAAEAKERKKYEEDAQVKRDRLLKALDEDTKKKSK-KFFGLF 664
            +A+R AG  DRVVE+R+PLGLVL ++  G+V++  V    NA+R  +V  GD ++  SATFGD +WS RGAGL RV  A+RVR G +V+LV EST ESK+K+   A   K  ++   +AQ KRD+LL  L++D KK  K KF GLF
Sbjct:   57 KASRAAGAEDRVVELRRPLGLVLNDDGNGNVYVETVAPRGNAARTGEVKEGDLVTMCSATFGDQMWSCRGAGLTRVLAAIRVRAGPTVKLVFESTAESKTKVKRGAKAVKAAEEARANAQAKRDQLLDELEQDEKKLKKGKFLGLF 202

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BLAST of jgi.p|Trimin1|353492 vs. uniprot
Match: A0A1E7FDA8_9STRA (PDZ domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDA8_9STRA)

HSP 1 Score: 131 bits (329), Expect = 1.550e-33
Identity = 82/177 (46.33%), Postives = 112/177 (63.28%), Query Frame = 2

Query:  137 SSRLVASNTCSRSASSLRMSXXXXDALTAAARAARKAGPNDRVVEIRKPLGLVLEENEKGDVFITKVKDNSNASRNPKVFPGDKISFISATFGDDLWSVRGAGLARVQNAVRVRQGDSVRLVLESTNESKSKIAAAAAEAKERKKYEEDAQVKRDRLLKALDED-TKKKSKKFFGLF 664
            S+  + S +CS S ++L M     D L AA R++R AG +D VVE++KPLGLVL +++ G+V++  V    NA+R  KV  GD ++ +SATFGD +WS RG GL RV  A+RVR G  V LV ES N+ K K A+ + + +  K   E AQ K+D LL  L++D TK K  KF GLF
Sbjct:   37 STSTLVSPSCS-STTALFMGKEEEDLLRAA-RSSRSAGNDDEVVELQKPLGLVLNQDDAGNVYVETVAARGNAARTGKVKEGDIVTMVSATFGDQMWSTRGVGLTRVLTAIRVRTGPRVSLVFESQNQYKKKAASTSKQQQAMKDAREAAQAKKDTLLSELEQDETKLKKGKFLGLF 211

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BLAST of jgi.p|Trimin1|353492 vs. uniprot
Match: A0A7R9W701_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9W701_9STRA)

HSP 1 Score: 128 bits (322), Expect = 1.310e-32
Identity = 72/146 (49.32%), Postives = 99/146 (67.81%), Query Frame = 2

Query:  230 RAARKAGPNDRVVEIRKPLGLVLEENEKGDVFITKVKDNSNASRNPKVFPGDKISFISATFGDDLWSVRGAGLARVQNAVRVRQGDSVRLVLESTNESKSKIAAAAAEAKERKKYEEDAQVKRDRLLKALDEDTKKKSK-KFFGLF 664
            +++R AG +DRVVE+R+PLGLVL E+  G+V++  V    NA+R  +V  GD ++  SATFGD +WS RGAGL RV  A+RVR G +V+LV EST+E+++K    A  AK  +     AQ KRD+LL  L++D K+  K KF GLF
Sbjct:   57 KSSRAAGASDRVVELRRPLGLVLNEDGDGNVYVETVAPRGNAARTGEVREGDLVTMCSATFGDQMWSCRGAGLTRVLAAIRVRAGPTVKLVFESTSETQNKAKMGAKAAKAAEDARAKAQAKRDQLLDELEQDEKRLKKGKFLGLF 202

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BLAST of jgi.p|Trimin1|353492 vs. uniprot
Match: A0A4D9DC09_9STRA (PDZ domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DC09_9STRA)

HSP 1 Score: 126 bits (317), Expect = 7.220e-32
Identity = 75/147 (51.02%), Postives = 101/147 (68.71%), Query Frame = 2

Query:  230 RAARKAGPNDRVVEIRKPLGLVLEENEKGDVFITKVKDNSNASRNPKVFPGDKISFISATFGDDLWSVRGAGLARVQNAVRVRQGDSVRLVLESTNES--KSKIAAAAAEAKERKKYEEDAQVKRDRLLKALDEDTKKKSKKFFGLF 664
            RAARK GP D VVE++KPLG+VLEE+EKG+V++ ++    NA R+ KV  GD ++ ISATFGD+ WS RGAGL  +  A++VRQG++V++VLE +  +  KS   A A +AK   K  +DA      LL+ L ED +K  KKFFGLF
Sbjct:   62 RAARKPGPLDLVVELQKPLGIVLEEDEKGNVYVKELSPAGNAMRSGKVEKGDLVTMISATFGDECWSARGAGLGMIMQAIKVRQGNTVKIVLERSKAAPKKSVFKAPAPKAKPAPKKPDDAT-----LLRQL-EDEEKGKKKFFGLF 202

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BLAST of jgi.p|Trimin1|353492 vs. uniprot
Match: B8C928_THAPS (PDZ domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C928_THAPS)

HSP 1 Score: 126 bits (316), Expect = 8.850e-32
Identity = 72/144 (50.00%), Postives = 95/144 (65.97%), Query Frame = 2

Query:  236 ARKAGPNDRVVEIRKPLGLVLEENEKGDVFITKVKDNSNASRNPKVFPGDKISFISATFGDDLWSVRGAGLARVQNAVRVRQGDSVRLVLESTNESKSKIAAAAAEAKERKKYEEDAQVKRDRLLKALDEDTKKKSK-KFFGLF 664
            AR A   D +VE+++PLGLVL+E++ G+VF+  V    NA+R+ +V  GD ++  SATFGD +WS RGAGL RV  A+RVR G +V LV EST + K K A  A +A   K+ +E AQ KRD LL  L+ D +K  K KF GLF
Sbjct:   54 ARSASATDNLVELKRPLGLVLDEDDNGNVFVQTVAPRGNAARSGQVKEGDIVTMCSATFGDQMWSTRGAGLTRVLAAIRVRAGPTVSLVFESTTQRKVKGAEVAKQAAAAKEAKERAQKKRDELLSELEADERKLKKGKFLGLF 197

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BLAST of jgi.p|Trimin1|353492 vs. uniprot
Match: A0A7S4AUR0_9STRA (Hypothetical protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AUR0_9STRA)

HSP 1 Score: 125 bits (315), Expect = 1.280e-31
Identity = 72/153 (47.06%), Postives = 99/153 (64.71%), Query Frame = 2

Query:  209 DALTAAARAARKAGPNDRVVEIRKPLGLVLEENEKGDVFITKVKDNSNASRNPKVFPGDKISFISATFGDDLWSVRGAGLARVQNAVRVRQGDSVRLVLESTNESKSKIAAAAAEAKERKKYEEDAQVKRDRLLKALDEDTKKKSK-KFFGLF 664
            D L  ++R+ R+AG +D +VE+ +PLGLVL ++E G+V++  V    NA+R  KV  GD ++  SATFGDD+WS RG GL RV  A+RVR G  V+LV E+ N+SK K A +  + K        AQ K+D+LL  L++D KK  K KF GLF
Sbjct:   46 DDLLRSSRSKRQAGNDDNLVELTRPLGLVLNQDENGNVYVETVAPRGNAARTGKVKEGDIVTMCSATFGDDMWSTRGVGLTRVLAAIRVRAGPYVKLVFETPNQSKIKAANSTKQRKAAADARAAAQAKKDKLLGQLEDDEKKLKKGKFLGLF 198

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353492 vs. uniprot

BLAST of jgi.p|Trimin1|353492 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835Z5U3_9STRA	2.650e-116	94.47	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
D8LTE7_ECTSI	2.030e-43	54.42	PDZ domain-containing protein n=2 Tax=Ectocarpus T...	[more]
A0A7S1DAB5_CYCTE	2.170e-34	51.02	Hypothetical protein n=1 Tax=Cyclophora tenuis Tax...	[more]
A0A6U1P4I4_9STRA	2.840e-34	43.08	Hypothetical protein n=1 Tax=Fibrocapsa japonica T...	[more]
A0A7S4IT66_9STRA	3.090e-34	50.68	Hypothetical protein n=1 Tax=Odontella aurita TaxI...	[more]
A0A1E7FDA8_9STRA	1.550e-33	46.33	PDZ domain-containing protein n=1 Tax=Fragilariops...	[more]
A0A7R9W701_9STRA	1.310e-32	49.32	Hypothetical protein n=1 Tax=Pseudictyota dubia Ta...	[more]
A0A4D9DC09_9STRA	7.220e-32	51.02	PDZ domain-containing protein n=2 Tax=Monodopsidac...	[more]
B8C928_THAPS	8.850e-32	50.00	PDZ domain-containing protein n=1 Tax=Thalassiosir...	[more]
A0A7S4AUR0_9STRA	1.280e-31	47.06	Hypothetical protein n=1 Tax=Pseudo-nitzschia aust...	[more]

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Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_166	contig	Contig_166:206576..210360 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|353492\|estExt_Genemark1.C_Ctg_1660024
Description	Domain present in PSD-95, Dlg, and ZO-1/2.
COG category	S
Max annot lvl	2759\|Eukaryota
EggNOG OGs	2DS7A@1\|root,2S6FC@2759\|Eukaryota
Evalue	7.57e-46
Seed ortholog	2880.D8LTE7
Hectar predicted targeting category	chloroplast
Ec32 ortholog description	PDZ domain
Ec32 ortholog	Ec-02_006070.1
TranscriptId	353814
Track	FilteredModels1
ProteinId	353492

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353492	gene_13318	Tribonema minus UTEX_B_3156	gene	Contig_166 206576..210360 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353492	Trimin1\|353492\|estExt_Genemark1.C_Ctg_1660024	Tribonema minus UTEX_B_3156	polypeptide	Contig_166 206643..210134 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_13318_1	exon_13318_1	Tribonema minus UTEX_B_3156	exon	Contig_166 206576..206723 +
exon_13318_2	exon_13318_2	Tribonema minus UTEX_B_3156	exon	Contig_166 206807..206971 +
exon_13318_3	exon_13318_3	Tribonema minus UTEX_B_3156	exon	Contig_166 207169..207243 +
exon_13318_4	exon_13318_4	Tribonema minus UTEX_B_3156	exon	Contig_166 207980..208135 +
exon_13318_5	exon_13318_5	Tribonema minus UTEX_B_3156	exon	Contig_166 210012..210360 +

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_13318	UTR5_13318	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_166 206576..206642 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_13318	CDS_13318	Tribonema minus UTEX_B_3156	CDS	Contig_166 206643..206723 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_13318	UTR3_13318	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_166 210135..210360 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_166:206576..210360+
coding sequence from alignment at Contig_166:206576..210360+

spliced messenger RNA

>mRNA_13318 ID=mRNA_13318|Name=jgi.p|Trimin1|353492|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=893bp|location=Sequence derived from alignment at Contig_166:206576..210360+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCTTTGTGTCGTCGCCCCTCGGCCCTGTACTTCTCACACGCGCTCACTTG
ACGCAGCGGCAGCAGCCATGAAGTTCCTGGTCCTGTGCCTCGCGGTGGTA
GTGGCTAGCGCAGCAGCCTTCGTTGCGTGCCCGACTTCTTCAAGATTGGT
TGCAAGCAACACCTGCTCCAGGAGCGCGAGCAGTCTGCGCATGTCCGACG
ACGACGAGGACGCTTTGACGGCAGCAGCGCGGGCAGCTCGCAAGGCGGGA
CCTAACGACCGCGTTGTCGAAATCAGGAAGCCATTGGGACTGGTGCTGGA
GGAGAACGAGAAGGGCGATGTATTCATCACAAAGGTCAAGGATAACAGCA
ACGCTTCGAGGAATCCCAAGGTTTTCCCAGGGGACAAGATCTCGTTCATC
TCTGCCACATTTGGCGATGACCTGTGGAGCGTGCGCGGCGCGGGGCTGGC
GCGTGTGCAGAATGCTGTGAGGGTGAGGCAGGGAGACTCGGTGAGGCTGG
TGCTGGAGTCCACCAATGAGAGCAAGAGCAAGATTGCGGCTGCGGCTGCG
GAGGCAAAAGAACGCAAAAAGTATGAGGAGGATGCTCAGGTGAAGCGCGA
CAGGCTGCTCAAGGCGCTCGACGAGGACACCAAGAAGAAGTCCAAGAAGT
TCTTCGGACTGTTCTAAGAACGGCTCTAGGAACAGTCGTATGAACTGTCT
TGTAGGAGCGCCACAGCTCTCTGGGACTGCCCCCAGAGGTGCACACTCGT
CAGTATGAAGTCTACACTCCCACCCAGTGCTGAAAGGTTGTCGTAAGCAG
TTGCTGCGGGGCATGCCATGCCACGCTGCATTGAACGCCAACCCACAATG
CGTATAGACTCGATAATGATTAAAATGCCACACCACATTGTTA

protein sequence of jgi.p|Trimin1|353492

>Trimin1|353492|estExt_Genemark1.C_Ctg_1660024 ID=Trimin1|353492|estExt_Genemark1.C_Ctg_1660024|Name=jgi.p|Trimin1|353492|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=200bp
MKFLVLCLAVVVASAAAFVACPTSSRLVASNTCSRSASSLRMSDDDEDAL
TAAARAARKAGPNDRVVEIRKPLGLVLEENEKGDVFITKVKDNSNASRNP
KVFPGDKISFISATFGDDLWSVRGAGLARVQNAVRVRQGDSVRLVLESTN
ESKSKIAAAAAEAKERKKYEEDAQVKRDRLLKALDEDTKKKSKKFFGLF*

mRNA from alignment at Contig_166:206576..210360+

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_13318 ID=mRNA_13318|Name=jgi.p|Trimin1|353492|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=3785bp|location=Sequence derived from alignment at Contig_166:206576..210360+ (Tribonema minus UTEX_B_3156 )
GCTTTGTGTCGTCGCCCCTCGGCCCTGTACTTCTCACACGCGCTCACTTG
ACGCAGCGGCAGCAGCCATGAAGTTCCTGGTCCTGTGCCTCGCGGTGGTA
GTGGCTAGCGCAGCAGCCTTCGTTGCGTGCCCGACTTCTTCAAGATTGGT
GAGTGTTTCATGATGGTTCGAAGGCGCTGTTGCACAGCTGTGAGCATATG
CTGATCTGTGCGAATACATGTGTTTTTGCAGGTTGCAAGCAACACCTGCT
CCAGGAGCGCGAGCAGTCTGCGCATGTCCGACGACGACGAGGACGCTTTG
ACGGCAGCAGCGCGGGCAGCTCGCAAGGCGGGACCTAACGACCGCGTTGT
CGAAATCAGGAAGCCATTGGGACTGGTGCTGGAGGAGAACGAGAAGGTAG
CAACACCAATGAGCTTGCAATGCTCAGGCTTTGTTGTGTATCGAATGGCG
AACTGTGCGAATTGATCGGGCGTTCTGTGTGTGCTGTCCTGCTCCAAAGG
TACTGTGCATGCACTGTCAGATAGAAGCAGCCCTGTAAAATGTATGACTG
AAGCTCCATACGACTTGCCTCTGCATCGCTCCTTCTTCTCCAGGGCGATG
TATTCATCACAAAGGTCAAGGATAACAGCAACGCTTCGAGGAATCCCAAG
GTTTTCCCAGGGGACAAGGTCAGTGTTTGCCTCTTTGCATCAGCAATAAT
GTGCTTGACTTTCATTGCTGTGTTATGAAAATCTCGCCAAAACTCATCCA
GACGACTTAATCGCTGGAATGGTGGTTGTAAATGCAGTGCATTAATTGCA
CAGCCTTCCCTGCCAGCATGCCTGCTTCAACAGGTGATGATTTTGTTAGT
GCCAATACGCTGTGTTCATGGCCGCTGCAAATCGTTCAAGTTTGCTGTCC
TGACGTTGGTGAACCATTCGACCTCCAGCATACTCAACTCACCCCAGCGC
TGTTTGTGCGTCATACGCAGTAAAGTTGTGCCGGGGCCATATTTCTAGAT
GTTTGTGTCGTCGCTCATCCACTGCACATGTCTCACTGCAACACGCTTAC
TCACCGTGTTCCACGACGCCTACGTCGGCATCAGTGCTGCACTTTGCTAC
GCTCGGTGGTCCGCATTGCTTGTCCTCCAAATTCCAAACCAGAAGCCCAC
GAAACAGAGTTCTCTCACCAACTTATCAAACACACACCAACTTGATGGTG
CCAAAACTCCCCACGGTATGCACATGTCGGTTGCAGCATGCCTAGGAGTG
TGAGCTGAGTTGGCAGGATACTGTGCTCCACCACGATCTCAAGTGCACCA
TCCGCTGCACCTCCATACATATTACCAGCCGCATTACGCACACCTGCCCA
CCAGCATGCATATACATGTACACTCACCGCGCCCGCTACCCATCGCCCCG
CCAGATCTCGTTCATCTCTGCCACATTTGGCGATGACCTGTGGAGCGTGC
GCGGCGCGGGGCTGGCGCGTGTGCAGAATGCTGTGAGGGTGAGGCAGGGA
GACTCGGTGAGGCTGGTGCTGGAGTCCACCAATGAGAGCAAGAGCAAGAT
TGCGGCTGCGGTGAGTTCAAGTGCTGAAGTTGAAGTATGAGGGTCTGAGC
GCGACCGTGACGTCATTATTGTTGCGTTTGATGCATCAGGGGTGCCCTGC
TTGCGACCTTCCTGTTGTGCGCTGACGTGAAGTCTAGAGTTGTCAAGTGC
CAGTGGATGCTGTGTTGAAAAGAGTACTTTGGACACAGATTGCACCAAGG
GCGAGCACTGCAATGACATCGTCTCTAACGAGAATATTATGTCAGCTTCG
AGCAGTACATGGCACAGCGCTGCCACAAGGCAGGTGCCTCGCAACGCGAG
CTCGAGCAGTCGCTCGAGCCGCTGAAGCAGCAGGCAAACAAAAGAGTGCT
GAACCATAGCAGCAGGTGTATGACGGCCGCCGCTTTTGTGTGCTGCAATG
CCAGCAGTGCACAAAAAAGTAGCAACTGTGCAACAGTCTTTTACGACACT
GTTAACTGGCGGAAGAGGCGGCTATGCACGCGTCCGCCTCTAACATGGTC
ATGCTTGCGCTGAGTTGACCCACGACAGCACTTCAAGTTGTCGCATTACA
GCACATCAAGTTGTGGTGTTGATATGCACCCGGCCAGGCTTGCGCAGCAC
GTAGGCGGGCCCGCCTCTGCGATGGAGACCTGAACAGCGCCTTGCTCGGC
CGCTGTTAGTTGTCAGTGTTGTTGGGCCATCTGCATCACTCTTCGCTGAA
GGTGTGATGTGACATGAGACCTACAGTTACAGCAGCAGTGCGCAGGTAGC
TCAATGTGTGCCTAGACTACCTGCGGCCTTGTGCTGCCTATACTGCTTTG
AAACGCTTCTCCAAACCAGCACAGTATAGCCCTTGTTGTGAATCAGCGGC
TAAATCAACAGTGGTTGGGTCTATTGCTGTACGCAATGCCCCGCTTACTC
AGTCAATCGGGCACATGTACTAAATGAGCGAAAATTAAAAAAAGTACTAA
ATGCACTTCTCCATTGTGTACTGAGTTCAGTACACCAGCGACAATGGCCC
TTCATCTCCTGCGGCTACATTAATTGAGGTCCTCTGTGTTGCATTATTGT
TGCGTTGTCGCACCAAAACCAAGCGCTCACTCATTCTGCGCAATTGTGCG
TGTAGCTGTTCTTTGATGTGGCTCTCTAACTTGCAGCCTCCGCAGTTGGA
TGAGCATTCATTACGATCTTTTAATTCGTTTTTCATTAGTGTTGGCTGGT
CATCGGCACTACAACCTGTTTGACTTGCACTATTCCTGTGACAGCAACCC
AGATGTCATTTCTCCATATATCTGTTGAATGGTTTTGCAAGAATGTGCTT
CAGAACATGTTAAAACGAGTTTAGGGGCAGTATTGGCTCCTGTATAGCCG
CATGGAGAGGCTGTTACATGCCATAACATGCACTAATGAGCAAAGTGCTT
GTGCTGCAAAATTTCAACTTCAAGCAGACCATCAGTTCGGCACTCTTTGG
TGGGTGGCGTCACCGCCGCCTTGCCTTGTGGCCTTCTTTCACTGAAAGCC
ATGCGCTGCTGACTCAATCAGGGATGTGTGATAATTACTGGGTTCGCATA
AGGCGCTAAAGCATCTAGCAAAAGATGATCCAGGTGTTACAGTATGCCCA
CACTGTTCACATGTGATGTTGTGGCAGCCAGGACAACGCACGAAACACTG
CCAACGGCAAGTGTACCACCGCAAATTATCATTGCTTCCTCAACACTTGC
TGCAGTGTGATCTTTCAATACTCACAGTAGCAACTGCACTGCATCATTGG
ACTTGAGCGTCTCATCTCACGGAACATGCTTTTGAGGTATCCGTTGCCTG
GCGTGTATTTTCACACTACACAACTGTTTTGTCACATCAGAGAGCGCCTT
CTCACGTGTTCAGCTGTTGCCTCTTGGCGTACGCAGGCTGCGGAGGCAAA
AGAACGCAAAAAGTATGAGGAGGATGCTCAGGTGAAGCGCGACAGGCTGC
TCAAGGCGCTCGACGAGGACACCAAGAAGAAGTCCAAGAAGTTCTTCGGA
CTGTTCTAAGAACGGCTCTAGGAACAGTCGTATGAACTGTCTTGTAGGAG
CGCCACAGCTCTCTGGGACTGCCCCCAGAGGTGCACACTCGTCAGTATGA
AGTCTACACTCCCACCCAGTGCTGAAAGGTTGTCGTAAGCAGTTGCTGCG
GGGCATGCCATGCCACGCTGCATTGAACGCCAACCCACAATGCGTATAGA
CTCGATAATGATTAAAATGCCACACCACATTGTTA

Coding sequence (CDS) from alignment at Contig_166:206576..210360+

>mRNA_13318 ID=mRNA_13318|Name=jgi.p|Trimin1|353492|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=600bp|location=Sequence derived from alignment at Contig_166:206576..210360+ (Tribonema minus UTEX_B_3156 )
ATGAAGTTCCTGGTCCTGTGCCTCGCGGTGGTAGTGGCTAGCGCAGCAGC
CTTCGTTGCGTGCCCGACTTCTTCAAGATTGGTTGCAAGCAACACCTGCT
CCAGGAGCGCGAGCAGTCTGCGCATGTCCGACGACGACGAGGACGCTTTG
ACGGCAGCAGCGCGGGCAGCTCGCAAGGCGGGACCTAACGACCGCGTTGT
CGAAATCAGGAAGCCATTGGGACTGGTGCTGGAGGAGAACGAGAAGGGCG
ATGTATTCATCACAAAGGTCAAGGATAACAGCAACGCTTCGAGGAATCCC
AAGGTTTTCCCAGGGGACAAGATCTCGTTCATCTCTGCCACATTTGGCGA
TGACCTGTGGAGCGTGCGCGGCGCGGGGCTGGCGCGTGTGCAGAATGCTG
TGAGGGTGAGGCAGGGAGACTCGGTGAGGCTGGTGCTGGAGTCCACCAAT
GAGAGCAAGAGCAAGATTGCGGCTGCGGCTGCGGAGGCAAAAGAACGCAA
AAAGTATGAGGAGGATGCTCAGGTGAAGCGCGACAGGCTGCTCAAGGCGC
TCGACGAGGACACCAAGAAGAAGTCCAAGAAGTTCTTCGGACTGTTCTAA