Trimin1|353481|estExt_Genemark1.C_Ctg_1660011 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353481
Unique NameTrimin1|353481|estExt_Genemark1.C_Ctg_1660011
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length269
Homology
BLAST of jgi.p|Trimin1|353481 vs. uniprot
Match: A0A836CIU2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIU2_9STRA)

HSP 1 Score: 514 bits (1325), Expect = 4.350e-184
Identity = 268/268 (100.00%), Postives = 268/268 (100.00%), Query Frame = 0
Query:    1 MHVASVCVNFALMSSLLPASAFSAAAAMPPSSPTTKSVWMQSASSAPLHRASPALHGVRAGCSAERRSRLATALRMSGGAAADDNTVASTSGRSSFGLASAWGVLSVLAILGNAVKRLAPIAMQPFKSGDLTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDKSAGPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLPLEEPAKTE 268
            MHVASVCVNFALMSSLLPASAFSAAAAMPPSSPTTKSVWMQSASSAPLHRASPALHGVRAGCSAERRSRLATALRMSGGAAADDNTVASTSGRSSFGLASAWGVLSVLAILGNAVKRLAPIAMQPFKSGDLTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDKSAGPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLPLEEPAKTE
Sbjct:    1 MHVASVCVNFALMSSLLPASAFSAAAAMPPSSPTTKSVWMQSASSAPLHRASPALHGVRAGCSAERRSRLATALRMSGGAAADDNTVASTSGRSSFGLASAWGVLSVLAILGNAVKRLAPIAMQPFKSGDLTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDKSAGPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLPLEEPAKTE 268          
BLAST of jgi.p|Trimin1|353481 vs. uniprot
Match: A0A835ZF77_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF77_9STRA)

HSP 1 Score: 270 bits (691), Expect = 3.310e-88
Identity = 138/204 (67.65%), Postives = 161/204 (78.92%), Query Frame = 0
Query:   73 ALRMSGGAAADDNTVA----STSGRSSFGLASAWGVLSVLAILGNAVKRLAPIAMQPFKSGDLTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDK---SAGPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLPL---EEPAK 266
            ALR+SGG      +VA    S   RSSFG ASAWGVLSVL+IL  A++RL PIA+QPFK+GDL+  HW +Y+ F  LMAY EG+KAFQKKFSPMVVQRALTLD+   S GPLR++LAGPY MGLF+A+RKRKIVSWTL  +V+ LV  VR+LPYPWRSIID GVVAGLSWG+ AI+Y+WVRSWFG  PGVDAQ+P    E PAK
Sbjct:   20 ALRLSGGGIGRGKSVAPPPPSAPARSSFGFASAWGVLSVLSILAGALRRLVPIALQPFKAGDLSYGHWALYMSFVALMAYVEGHKAFQKKFSPMVVQRALTLDQARTSFGPLRIILAGPYCMGLFYATRKRKIVSWTLYISVIALVTVVRQLPYPWRSIIDAGVVAGLSWGASAILYFWVRSWFGRAPGVDAQMPESKEEAPAK 223          
BLAST of jgi.p|Trimin1|353481 vs. uniprot
Match: A0A836CMT5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT5_9STRA)

HSP 1 Score: 208 bits (529), Expect = 3.380e-63
Identity = 107/201 (53.23%), Postives = 140/201 (69.65%), Query Frame = 0
Query:   73 ALRMSGGAAADDNTVASTSGRSSFGLASAWGVLSVLAILGNAVKRLAPIAMQPFKSGD---LTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDKS-AGPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLPLE-EPAKTE 268
            AL   GGAA+ D  + S + +   G AS+WGVLSVLAI  NA +RL P+A++P +  D   LT   W  Y G   L+ Y +G +A ++KFS  VVQRALTLD+  A PLR++LAGPYSMGLF A+R+RK  SW +  A +G+++ ++K+PYPWRSI+D GV+AGL WG GA+ YYWVRSW G +PGVD Q+P   E A TE
Sbjct:   65 ALLSGGGAASVDTPMNSKAVK--IGWASSWGVLSVLAIFANAARRLGPVAIEPLQMSDKGGLTTVQWVCYAGCTALIGYMKGERAIRRKFSRHVVQRALTLDQGEATPLRVLLAGPYSMGLFRANRRRKASSWGMLVAAVGIIKVIKKMPYPWRSIVDAGVLAGLCWGGGAVAYYWVRSWSGINPGVDPQMPKRSEAAATE 263          
BLAST of jgi.p|Trimin1|353481 vs. uniprot
Match: W7TVP9_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVP9_9STRA)

HSP 1 Score: 199 bits (505), Expect = 3.030e-59
Identity = 103/195 (52.82%), Postives = 138/195 (70.77%), Query Frame = 0
Query:   70 LATALRMSGGAAADDNTVASTSGRSSFGLASAWGVLSVLAILGNAVKRLAPIAMQPFKSGD----LTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDKSAGPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLP 260
            +A   +++GGAA        TS + SF L++ WGV+ V+A+L NA++RL PIA++PFK        T  HW  YVGFA++MAYAEGYK FQ KFSP+VV+RALTL   +  L  VLA PYSMGLFHAS+KR+IVSWT++  V+GLV+AV+ L +P+RSI+D GVVAGLSWG+ +I   + ++  G  P +D  LP
Sbjct:   94 MAKLAKITGGAA----PAVETSQKQSFSLSALWGVVGVVAMLSNAIRRLLPIALEPFKKTATPTAFTPLHWAQYVGFALIMAYAEGYKGFQLKFSPLVVKRALTLGPRSPLLHKVLAAPYSMGLFHASKKRQIVSWTIALGVIGLVKAVKTLAFPYRSIVDAGVVAGLSWGALSIAGIYAQALRGHVPSIDPALP 284          
BLAST of jgi.p|Trimin1|353481 vs. uniprot
Match: A0A0M0JX49_9EUKA (Uncharacterized protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JX49_9EUKA)

HSP 1 Score: 195 bits (496), Expect = 8.760e-59
Identity = 95/168 (56.55%), Postives = 122/168 (72.62%), Query Frame = 0
Query:   93 RSSFGLASAWGVLSVLAILGNAVKRLAPIAMQPFKSGDLTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDKSAGPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLP 260
            R++ G+A AWGV   L IL +A+KRLAPIAMQPF   DL+   WG Y G   + AY EGY AFQKKFSP+VV+RA+TL +S  P+ + LA  YSMGL HA++KRKIVSW++S +V  +V  V++LPYPWRSI+D GV  GL+WG+ +IV  + R+  GT PGVD  LP
Sbjct:   51 RNAHGIAVAWGVCGFLGILASAIKRLAPIAMQPFLQRDLSWLQWGFYGGSMGIFAYVEGYGAFQKKFSPLVVERAMTLKQSTSPVHIALAPFYSMGLMHATKKRKIVSWSVSMSVAMVVGIVKRLPYPWRSIVDAGVCTGLAWGAVSIVIIYARALAGTPPGVDPCLP 218          
BLAST of jgi.p|Trimin1|353481 vs. uniprot
Match: A0A8J6CDI7_DIALT (Uncharacterized protein n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CDI7_DIALT)

HSP 1 Score: 187 bits (475), Expect = 1.170e-55
Identity = 93/165 (56.36%), Postives = 116/165 (70.30%), Query Frame = 0
Query:   99 ASAWGVLSVLAILGNAVKRLAPIAMQPFKSGDLTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDKSAG---PLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLP 260
            AS WGV+ V+AIL NA+ RLAPIA +PF+ G L   HW  Y       AY EGYKAFQ KFSP+VV RA TL    G    LR VLA  YSMGLFHA+RKRK++SWT+S AV+ +V  V++LPYPWRSI+D GVVAGL+WG  +I + +V++  G+ P V  +LP
Sbjct:   52 ASHWGVVGVMAILANAIGRLAPIAAEPFRYGGLAPLHWASYAATIAAFAYVEGYKAFQLKFSPLVVSRAFTLGPQGGRATALRSVLAPFYSMGLFHATRKRKVISWTISLAVIVIVGVVKRLPYPWRSIVDAGVVAGLTWGVTSIGWIYVKAIGGSLPNVSTELP 216          
BLAST of jgi.p|Trimin1|353481 vs. uniprot
Match: A0A7S2WJT5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WJT5_9STRA)

HSP 1 Score: 189 bits (480), Expect = 2.710e-55
Identity = 98/174 (56.32%), Postives = 120/174 (68.97%), Query Frame = 0
Query:   98 LASAWGVLSVLAILGNAVKRLAPIAMQPFKS-GDLTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDKS--AGP---LRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWF-GTDPGVDAQLPLEEP 264
            +AS WG L V+ IL N +KRL P+A+QPF S GDL+  HW  Y  + V M Y EGYKAFQ KF P+VV RA TL++    GP   LR  LA  YSMGLFHAS+KR IVSW+    +  +V  V++LPYPWRSIIDGGVV GLSWG+ +I Y ++R  F G  P VD QLP++EP
Sbjct:  125 IASTWGALGVMYILANPIKRLLPVALQPFASPGDLSAMHWVAYALWCVFMGYTEGYKAFQLKFCPLVVSRAATLERQDCRGPGWWLRAALAPLYSMGLFHASKKRLIVSWSFVIGISAIVATVKRLPYPWRSIIDGGVVFGLSWGAASIAYLYLRKIFTGQIPEVDPQLPVKEP 298          
BLAST of jgi.p|Trimin1|353481 vs. uniprot
Match: A0A7S3SW48_EMIHU (Hypothetical protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=A0A7S3SW48_EMIHU)

HSP 1 Score: 185 bits (469), Expect = 1.950e-54
Identity = 92/170 (54.12%), Postives = 114/170 (67.06%), Query Frame = 0
Query:   97 GLASAWGVLSVLAILGNAVKRLAPIAMQPFKSGDLTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDKSAGP---LRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLPLEE 263
            GL +AWGV   L IL  A+ RLAPIAMQP    D+T   WG+Y G     AY EGYKAFQ KFSP+VVQRA+TL   + P   L  VLA  YSMGLFHAS+KRK VSW++S  V  ++  V++LPYPWRS++D GV  GL WG  +I   ++R+  G  PGVD +LP E+
Sbjct:   72 GLRTAWGVCGFLGILAQAIGRLAPIAMQPILQRDITMLQWGLYGGTMAFFAYTEGYKAFQCKFSPLVVQRAMTLSTRSPPPPLLHSVLAPFYSMGLFHASKKRKTVSWSISLGVACIIGLVKRLPYPWRSVVDAGVCTGLLWGGTSIGVIYLRALAGKSPGVDPELPKED 241          
BLAST of jgi.p|Trimin1|353481 vs. uniprot
Match: A0A7R9U4X8_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U4X8_9STRA)

HSP 1 Score: 180 bits (457), Expect = 2.990e-52
Identity = 85/166 (51.20%), Postives = 110/166 (66.27%), Query Frame = 0
Query:   97 GLASAWGVLSVLAILGNAVKRLAPIAMQPFKSGDLTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDKSAGPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLPLE 262
            G+A+ WGVL V  +L N ++RL PIA++PF+ GD     W  Y GFAV MAYAEG K FQKKF P VV+RA  L  S  PL  + A  + MGLFHAS+KRKI+SW+L   V G++Q  ++L YPW +I+D G V GL WG  ++   +VRS FG  P + A+LP E
Sbjct:  104 GVAATWGVLGVFYVLLNGLRRLVPIAVEPFQRGDFGLGLWAAYAGFAVFMAYAEGVKGFQKKFCPFVVRRAQLLKGSTNPLHCIFAPFFCMGLFHASKKRKILSWSLLIGVFGIIQVAKRLAYPWNAIVDAGAVVGLGWGCISLGATYVRSLFGQVPSISAELPSE 269          
BLAST of jgi.p|Trimin1|353481 vs. uniprot
Match: D8LTY0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTY0_ECTSI)

HSP 1 Score: 178 bits (451), Expect = 7.010e-51
Identity = 98/184 (53.26%), Postives = 119/184 (64.67%), Query Frame = 0
Query:   96 FGLASAWGVLSVLAILGNAVKRLAPIAMQPFKSGDLTRAHWGMYVGFAVLMAYAEGYKAFQKKFSPMVVQRALTLDKSA----------------GPLRLVLAGPYSMGLFHASRKRKIVSWTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFGTDPGVDAQLPLEE 263
            FG+ASAWGV+SV+ IL NAVKRLAPIAMQPF    L                       FQKKFSP+VV+RALTLD++A                GPLRL+LAGPYSMGLFHA++KRK VSW+L+  VL LVQ V++LPYPWRSI+D GVV GLS+G+ +I   W R+  G  P +D  LP E+
Sbjct:  149 FGVASAWGVVSVVFILMNAVKRLAPIAMQPFSRASL----------------------GFQKKFSPLVVKRALTLDQAAAAVPAADGGQKRRRRAGPLRLLLAGPYSMGLFHATKKRKTVSWSLTAGVLCLVQMVKRLPYPWRSIVDAGVVVGLSYGTLSICVIWARAILGKAPSIDPALPEEK 310          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353481 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIU2_9STRA4.350e-184100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835ZF77_9STRA3.310e-8867.65Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A836CMT5_9STRA3.380e-6353.23Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7TVP9_9STRA3.030e-5952.82Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
A0A0M0JX49_9EUKA8.760e-5956.55Uncharacterized protein n=1 Tax=Chrysochromulina t... [more]
A0A8J6CDI7_DIALT1.170e-5556.36Uncharacterized protein n=2 Tax=Diacronema lutheri... [more]
A0A7S2WJT5_9STRA2.710e-5556.32Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3SW48_EMIHU1.950e-5454.12Hypothetical protein n=2 Tax=Emiliania huxleyi Tax... [more]
A0A7R9U4X8_9STRA2.990e-5251.20Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
D8LTY0_ECTSI7.010e-5153.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_166contigContig_166:76174..79094 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353481mRNA_13295Tribonema minus UTEX_B_3156 mRNAContig_166 76156..79393 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353481|estExt_Genemark1.C_Ctg_1660011 ID=Trimin1|353481|estExt_Genemark1.C_Ctg_1660011|Name=jgi.p|Trimin1|353481|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=269bp
MHVASVCVNFALMSSLLPASAFSAAAAMPPSSPTTKSVWMQSASSAPLHR
ASPALHGVRAGCSAERRSRLATALRMSGGAAADDNTVASTSGRSSFGLAS
AWGVLSVLAILGNAVKRLAPIAMQPFKSGDLTRAHWGMYVGFAVLMAYAE
GYKAFQKKFSPMVVQRALTLDKSAGPLRLVLAGPYSMGLFHASRKRKIVS
WTLSFAVLGLVQAVRKLPYPWRSIIDGGVVAGLSWGSGAIVYYWVRSWFG
TDPGVDAQLPLEEPAKTE*
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