Trimin1|9722|CE9721_89 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|9722
Unique NameTrimin1|9722|CE9721_89
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length117
Homology
BLAST of jgi.p|Trimin1|9722 vs. uniprot
Match: A0A836CN42_9STRA (Glutaredoxin subgroup I n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN42_9STRA)

HSP 1 Score: 232 bits (592), Expect = 2.450e-77
Identity = 116/116 (100.00%), Postives = 116/116 (100.00%), Query Frame = 0
Query:    1 MSSSSGEAVKAVQDKIDSTKVLVYEKWGCPFCGRVKDLLEDLALEPEPEFIELDGHVGASTQRALMQLTGQRTVPNVFIGGTHVGGCDDTMAAVQSGKLKELLDKAGVRSSNLSKM 116
            MSSSSGEAVKAVQDKIDSTKVLVYEKWGCPFCGRVKDLLEDLALEPEPEFIELDGHVGASTQRALMQLTGQRTVPNVFIGGTHVGGCDDTMAAVQSGKLKELLDKAGVRSSNLSKM
Sbjct:    1 MSSSSGEAVKAVQDKIDSTKVLVYEKWGCPFCGRVKDLLEDLALEPEPEFIELDGHVGASTQRALMQLTGQRTVPNVFIGGTHVGGCDDTMAAVQSGKLKELLDKAGVRSSNLSKM 116          
BLAST of jgi.p|Trimin1|9722 vs. uniprot
Match: A0A2P6U4E8_CHLSO (Glutaredoxin family isoform 1 n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U4E8_CHLSO)

HSP 1 Score: 100 bits (249), Expect = 1.480e-24
Identity = 54/109 (49.54%), Postives = 68/109 (62.39%), Query Frame = 0
Query:    3 SSSGEAVKAVQDKIDSTKVLVYEKWGCPFCGRVKDLLEDLALEPEPEFIELDGHV-GASTQRALMQLTGQRTVPNVFIGGTHVGGCDDTMAAVQSGKLKELLDKAGVRS 110
            SS  +    VQ K     V+VY K  CP+C  VK L E L +  +   +ELD    G+  Q AL  +TG+RTVP VF+GG HVGGCDDT+AA  SGKLK LL+ AGV++
Sbjct:   54 SSEADFTAMVQQKNADNPVMVYSKTYCPYCSEVKSLFERLGVNAK--VVELDELADGSKVQEALATVTGRRTVPQVFVGGNHVGGCDDTVAAYNSGKLKTLLEAAGVQA 160          
BLAST of jgi.p|Trimin1|9722 vs. uniprot
Match: A0A1D2A3R0_AUXPR (Glutaredoxin domain-containing protein n=2 Tax=Auxenochlorella protothecoides TaxID=3075 RepID=A0A1D2A3R0_AUXPR)

HSP 1 Score: 100 bits (248), Expect = 1.990e-24
Identity = 50/105 (47.62%), Postives = 70/105 (66.67%), Query Frame = 0
Query:    5 SGEAVKAVQDKIDSTKVLVYEKWGCPFCGRVKDLLEDLALEPEPEFIELDGHV-GASTQRALMQLTGQRTVPNVFIGGTHVGGCDDTMAAVQSGKLKELLDKAGV 108
            SG+ V  +++K     V+VY K  CP+C  VK L + L ++ +   IELD    G   Q+AL ++ G++TVP VF+GG H+GGCDDTMAA  SGKLKE+L +AG+
Sbjct:   55 SGDLVATLKEKNKKNPVVVYSKTYCPYCAEVKSLFQKLKVDAK--VIELDSLADGNDVQQALFEVVGKKTVPQVFVGGQHIGGCDDTMAANDSGKLKEMLKEAGL 157          
BLAST of jgi.p|Trimin1|9722 vs. uniprot
Match: A0A4S8JR44_MUSBA (Glutaredoxin domain-containing protein n=2 Tax=Musa TaxID=4640 RepID=A0A4S8JR44_MUSBA)

HSP 1 Score: 97.8 bits (242), Expect = 3.660e-24
Identity = 53/105 (50.48%), Postives = 69/105 (65.71%), Query Frame = 0
Query:    8 AVKAVQDKIDSTKVLVYEKWGCPFCGRVKDLLEDLALEPEPEFIELDGHV-GASTQRALMQLTGQRTVPNVFIGGTHVGGCDDTMAAVQSGKLKELLDKAGVRSS 111
            A++  ++ + S  V+V+ K  CPFC RVK LL+ L    +   IELD    G+  Q AL + TGQRTVPNVFIGG H+GGCDDT+A  Q GKL+ LL +AG  +S
Sbjct:    2 ALEKAKETVSSNPVVVFSKTFCPFCVRVKKLLDQLGARYKA--IELDVESDGSKIQAALAEWTGQRTVPNVFIGGKHIGGCDDTLAKHQQGKLEPLLIEAGALAS 104          
BLAST of jgi.p|Trimin1|9722 vs. uniprot
Match: A0A0D6R8L1_ARACU (Glutaredoxin domain-containing protein n=2 Tax=Araucariaceae TaxID=25664 RepID=A0A0D6R8L1_ARACU)

HSP 1 Score: 96.7 bits (239), Expect = 1.920e-23
Identity = 55/111 (49.55%), Postives = 70/111 (63.06%), Query Frame = 0
Query:    2 SSSSGEAVKAVQDK----IDSTKVLVYEKWGCPFCGRVKDLLEDLALEPEPEFIELDGHV-GASTQRALMQLTGQRTVPNVFIGGTHVGGCDDTMAAVQSGKLKELLDKAG 107
            SS S E++    +K    + S  V+V+ K  CP+C +VK LL  L  + +   +ELD    GA  Q AL + TGQRTVPNVFIGGTH+GGCDDT+A   SGKL  LL +AG
Sbjct:   18 SSKSPESITTAMEKAKAVVSSNPVVVFSKTYCPYCTQVKQLLSRLGAKTK--VVELDTESDGADIQSALKEWTGQRTVPNVFIGGTHIGGCDDTVAKHNSGKLVPLLSEAG 126          
BLAST of jgi.p|Trimin1|9722 vs. uniprot
Match: GRXC6_ORYSJ (Glutaredoxin-C6 n=15 Tax=cellular organisms TaxID=131567 RepID=GRXC6_ORYSJ)

HSP 1 Score: 95.1 bits (235), Expect = 4.980e-23
Identity = 53/106 (50.00%), Postives = 66/106 (62.26%), Query Frame = 0
Query:    8 AVKAVQDKIDSTKVLVYEKWGCPFCGRVKDLLEDLALEPEPEFIELDGHV-GASTQRALMQLTGQRTVPNVFIGGTHVGGCDDTMAAVQSGKLKELLDKAGVRSSN 112
            A+   ++ + S  V+VY K  CPFC RVK L E L    +   IELDG   G+  Q AL + TGQRTVPNVFI G H+GGCDDT+A    GKL  LL +AG  +S+
Sbjct:    2 ALAKAKETVASAPVVVYSKSYCPFCVRVKKLFEQLGATFKA--IELDGESDGSELQSALAEWTGQRTVPNVFINGKHIGGCDDTLALNNEGKLVPLLTEAGAIASS 105          
BLAST of jgi.p|Trimin1|9722 vs. uniprot
Match: A0A0D2LZN7_9CHLO (Glutaredoxin-C8 n=1 Tax=Monoraphidium neglectum TaxID=145388 RepID=A0A0D2LZN7_9CHLO)

HSP 1 Score: 94.0 bits (232), Expect = 8.360e-23
Identity = 50/89 (56.18%), Postives = 62/89 (69.66%), Query Frame = 0
Query:   20 KVLVYEKWGCPFCGRVKDLLEDLALEPEP-EFIELDGHVGASTQRALMQLTGQRTVPNVFIGGTHVGGCDDTMAAVQSGKLKELLDKAG 107
            KV+VY K  CP+C RVK LL DL ++ +  E   LD   G   Q +L+++ G+RTVP VFIGG+HVGGCDDT+AA  SGKLKELL   G
Sbjct:    4 KVVVYSKTTCPYCTRVKGLLGDLKVDAKVIELNTLDD--GPEYQDSLLEVVGRRTVPQVFIGGSHVGGCDDTVAAYNSGKLKELLAGVG 90          
BLAST of jgi.p|Trimin1|9722 vs. uniprot
Match: A9NP69_PICSI (Glutaredoxin domain-containing protein n=2 Tax=Picea sitchensis TaxID=3332 RepID=A9NP69_PICSI)

HSP 1 Score: 96.3 bits (238), Expect = 1.090e-22
Identity = 53/109 (48.62%), Postives = 69/109 (63.30%), Query Frame = 0
Query:    4 SSGEAVK-AVQDKIDSTKVLVYEKWGCPFCGRVKDLLEDLALEPEPEFIELD--GHVGASTQRALMQLTGQRTVPNVFIGGTHVGGCDDTMAAVQSGKLKELLDKAGVR 109
            SSG  +K +++ +I+   V+VY K  CP+C + K L EDL ++P    +ELD  G      Q AL  LTGQ TVPNVFIGG H+GGC DTM   Q+G+L  LL  AGV+
Sbjct:   73 SSGSQIKESIETEINENPVVVYSKTWCPYCQQAKGLFEDLGVKPY--VVELDELGAAERHVQNALEGLTGQSTVPNVFIGGKHIGGCSDTMELHQNGELIPLLSAAGVK 179          
BLAST of jgi.p|Trimin1|9722 vs. uniprot
Match: A0A197KDE7_9FUNG (Glutaredoxin n=1 Tax=Linnemannia elongata AG-77 TaxID=1314771 RepID=A0A197KDE7_9FUNG)

HSP 1 Score: 94.4 bits (233), Expect = 1.090e-22
Identity = 51/96 (53.12%), Postives = 65/96 (67.71%), Query Frame = 0
Query:   12 VQDKIDSTKVLVYEKWGCPFCGRVKDLLEDLALEPEPEFIELDGHV-GASTQRALMQLTGQRTVPNVFIGGTHVGGCDDTMAAVQSGKLKELLDKA 106
            ++  I S  V+++ K  CP+C RVKDL +DLA+  +   +ELD H  G   Q  L  LTGQ +VPNVF+ GTHVGG DDT AA  SG+LKELLDK+
Sbjct:   13 IKTSIASNPVMIFSKSYCPYCLRVKDLFDDLAVPYKA--LELDEHENGFEIQADLKTLTGQTSVPNVFVKGTHVGGSDDTHAARDSGRLKELLDKS 106          
BLAST of jgi.p|Trimin1|9722 vs. uniprot
Match: A9NY07_PICSI (Glutaredoxin domain-containing protein n=5 Tax=cellular organisms TaxID=131567 RepID=A9NY07_PICSI)

HSP 1 Score: 94.4 bits (233), Expect = 1.090e-22
Identity = 50/101 (49.50%), Postives = 65/101 (64.36%), Query Frame = 0
Query:    8 AVKAVQDKIDSTKVLVYEKWGCPFCGRVKDLLEDLALEPEPEFIELDGHV-GASTQRALMQLTGQRTVPNVFIGGTHVGGCDDTMAAVQSGKLKELLDKAG 107
            A+   ++ + S  V+V+ K  CP+C +VK LL  L  + +   +ELD    G   Q AL + TGQRTVPNVFIGGTH+GGCDDT+A   SGKL  LL +AG
Sbjct:   15 AMGKAKEIVSSNSVVVFSKTYCPYCTQVKQLLSSLGAKTK--VVELDTESDGKEIQTALQEWTGQRTVPNVFIGGTHIGGCDDTVAKHNSGKLVPLLTEAG 113          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|9722 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CN42_9STRA2.450e-77100.00Glutaredoxin subgroup I n=1 Tax=Tribonema minus Ta... [more]
A0A2P6U4E8_CHLSO1.480e-2449.54Glutaredoxin family isoform 1 n=1 Tax=Chlorella so... [more]
A0A1D2A3R0_AUXPR1.990e-2447.62Glutaredoxin domain-containing protein n=2 Tax=Aux... [more]
A0A4S8JR44_MUSBA3.660e-2450.48Glutaredoxin domain-containing protein n=2 Tax=Mus... [more]
A0A0D6R8L1_ARACU1.920e-2349.55Glutaredoxin domain-containing protein n=2 Tax=Ara... [more]
GRXC6_ORYSJ4.980e-2350.00Glutaredoxin-C6 n=15 Tax=cellular organisms TaxID=... [more]
A0A0D2LZN7_9CHLO8.360e-2356.18Glutaredoxin-C8 n=1 Tax=Monoraphidium neglectum Ta... [more]
A9NP69_PICSI1.090e-2248.62Glutaredoxin domain-containing protein n=2 Tax=Pic... [more]
A0A197KDE7_9FUNG1.090e-2253.13Glutaredoxin n=1 Tax=Linnemannia elongata AG-77 Ta... [more]
A9NY07_PICSI1.090e-2249.50Glutaredoxin domain-containing protein n=5 Tax=cel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 67..80
score: 63.39
coord: 21..39
score: 43.42
coord: 81..94
score: 39.88
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 6..114
e-value: 3.8E-33
score: 115.5
NoneNo IPR availablePIRSRPIRSR005894-2PIRSR005894-2coord: 9..109
e-value: 1.1E-8
score: 32.8
NoneNo IPR availablePANTHERPTHR45694:SF14GLUTAREDOXIN-C2coord: 7..109
NoneNo IPR availablePANTHERPTHR45694GLUTAREDOXIN 2coord: 7..109
NoneNo IPR availablePROSITEPS51354GLUTAREDOXIN_2coord: 9..110
score: 22.283649
NoneNo IPR availableCDDcd03419GRX_GRXh_1_2_likecoord: 20..102
e-value: 7.10966E-34
score: 110.707
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 21..84
e-value: 6.1E-16
score: 58.4
IPR011899Glutaredoxin, eukaryotic/virialTIGRFAMTIGR02180TIGR02180coord: 21..103
e-value: 1.9E-26
score: 90.1
IPR011767Glutaredoxin active sitePROSITEPS00195GLUTAREDOXIN_1coord: 23..39
IPR018527Rubredoxin, iron-binding sitePROSITEPS00202RUBREDOXINcoord: 23..33
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 10..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_115contigContig_115:28493..29871 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|9722mRNA_11633Tribonema minus UTEX_B_3156 mRNAContig_115 28421..30033 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|9722|CE9721_89 ID=Trimin1|9722|CE9721_89|Name=jgi.p|Trimin1|9722|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=117bp
MSSSSGEAVKAVQDKIDSTKVLVYEKWGCPFCGRVKDLLEDLALEPEPEF
IELDGHVGASTQRALMQLTGQRTVPNVFIGGTHVGGCDDTMAAVQSGKLK
ELLDKAGVRSSNLSKM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014025Glutaredoxin_subgr
IPR002109Glutaredoxin
IPR011899Glutaredoxin_euk/vir
IPR011767GLR_AS
IPR018527Rubredoxin_Fe_BS
IPR036249Thioredoxin-like_sf