Trimin1|91923|CE91922_1228 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|91923
Unique NameTrimin1|91923|CE91922_1228
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length611
Homology
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A836C969_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C969_9STRA)

HSP 1 Score: 679 bits (1751), Expect = 8.780e-238
Identity = 610/610 (100.00%), Postives = 610/610 (100.00%), Query Frame = 0
Query:    1 MSTMELKVKYNDSIKRFAWLGSTIFVNLEREIQSRFNDLKTSEDSLRITYVDDEGDEILIENDGDFATAYNHTRRAWSAAASSGSPPLLTLRVQRTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRLSDFFAGLASXXXXXXXXXXXXTASSTPAAVDPVAAAQAFMXXXXXXXXXXXXXASGSAARGSGGSFHDLVRNVMRNAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQNADAAVHRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAAAEFSPYLKIPTPAQAPAVLVCVLRDGTHAGVLPFLSGCPGMRGMNFNNMNFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSPPTASIFDSATPLLIALDAAAATFGTAXXXXXXXXXXXXXXXXDADEYDIVGPPSPAAAXXXXXXXXXEPSAAVATAAVEPVAARASMVPDFDGAEETKEDGDVDVVADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRRRAKRWQAELVRLAEMGFVDFARNLALLEKHVGAPGAGGMTAVLNDLLSD 610
            MSTMELKVKYNDSIKRFAWLGSTIFVNLEREIQSRFNDLKTSEDSLRITYVDDEGDEILIENDGDFATAYNHTRRAWSAAASSGSPPLLTLRVQRTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRLSDFFAGLASXXXXXXXXXXXXTASSTPAAVDPVAAAQAFMXXXXXXXXXXXXXASGSAARGSGGSFHDLVRNVMRNAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQNADAAVHRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAAAEFSPYLKIPTPAQAPAVLVCVLRDGTHAGVLPFLSGCPGMRGMNFNNMNFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSPPTASIFDSATPLLIALDAAAATFGTAXXXXXXXXXXXXXXXXDADEYDIVGPPSPAAAXXXXXXXXXEPSAAVATAAVEPVAARASMVPDFDGAEETKEDGDVDVVADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRRRAKRWQAELVRLAEMGFVDFARNLALLEKHVGAPGAGGMTAVLNDLLSD
Sbjct:    1 MSTMELKVKYNDSIKRFAWLGSTIFVNLEREIQSRFNDLKTSEDSLRITYVDDEGDEILIENDGDFATAYNHTRRAWSAAASSGSPPLLTLRVQRTASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPRLSDFFAGLASXXXXXXXXXXXXTASSTPAAVDPVAAAQAFMXXXXXXXXXXXXXASGSAARGSGGSFHDLVRNVMRNAATAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTQNADAAVHRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAAAEFSPYLKIPTPAQAPAVLVCVLRDGTHAGVLPFLSGCPGMRGMNFNNMNFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDLSPPTASIFDSATPLLIALDAAAATFGTAXXXXXXXXXXXXXXXXDADEYDIVGPPSPAAAXXXXXXXXXEPSAAVATAAVEPVAARASMVPDFDGAEETKEDGDVDVVADXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKRRRAKRWQAELVRLAEMGFVDFARNLALLEKHVGAPGAGGMTAVLNDLLSD 610          
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A6H5JI15_9PHAE (ZZ-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI15_9PHAE)

HSP 1 Score: 77.8 bits (190), Expect = 3.320e-11
Identity = 38/66 (57.58%), Postives = 46/66 (69.70%), Query Frame = 0
Query:  256 VHRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAG--GAAAEFSPYLKIPTPAQAPAVLVCVLR 319
            VH GV+CD C VCPI G RYK +V AD+DLC  CE    G  + F P+LKI TP QAPA +VC+L+
Sbjct:  430 VHHGVKCDACDVCPIIGTRYKCAVRADFDLCEECERAPVGQGSPF-PFLKIRTPTQAPAAIVCLLK 494          
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A2U1P8I9_ARTAN (PB1 domain, Zinc finger, ZZ-type, UBA-like, Next to BRCA1, central domain protein n=3 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1P8I9_ARTAN)

HSP 1 Score: 65.1 bits (157), Expect = 3.140e-7
Identity = 32/51 (62.75%), Postives = 36/51 (70.59%), Query Frame = 0
Query:  257 HRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAAAEFSPYLKIPTP 307
            HRGV+CD CGV PITGPRYKS V  DYDLC+ C AG   A  S Y++I  P
Sbjct:  378 HRGVRCDGCGVHPITGPRYKSKVKDDYDLCSVCFAGMGTA--SDYVRIDRP 426          
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: C1N3F6_MICPC (Predicted protein n=2 Tax=Micromonas pusilla TaxID=38833 RepID=C1N3F6_MICPC)

HSP 1 Score: 65.1 bits (157), Expect = 3.560e-7
Identity = 29/53 (54.72%), Postives = 34/53 (64.15%), Query Frame = 0
Query:  257 HRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAA--AEFSPYLKIPTP 307
            H GVQCD CG+ PITG RYKS    DYDLCAAC   G    A  +P+ ++P P
Sbjct:  297 HAGVQCDACGIMPITGERYKSIAEGDYDLCAACHDSGRGTQAPHAPFARLPLP 349          
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A7S3E329_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon laureae TaxID=464258 RepID=A0A7S3E329_9CHLO)

HSP 1 Score: 60.8 bits (146), Expect = 4.170e-7
Identity = 29/59 (49.15%), Postives = 36/59 (61.02%), Query Frame = 0
Query:  249 TQNADAAVHRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAAAEFSPYLKIPTP 307
            T N DA  H  V+CD+CGV PI G R+KS  H +YDLC  C    AA E  PY+++  P
Sbjct:   56 TSNRDAR-HLAVECDICGVYPIRGARFKSLAHDNYDLCERCVRTEAAREQEPYVQVEVP 113          
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A835GVH0_9MAGN (ZZ-type domain-containing protein n=1 Tax=Coptis chinensis TaxID=261450 RepID=A0A835GVH0_9MAGN)

HSP 1 Score: 58.9 bits (141), Expect = 5.770e-7
Identity = 25/41 (60.98%), Postives = 29/41 (70.73%), Query Frame = 0
Query:  251 NADAAVHRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEA 291
            N     H+GV+CD CGV PITGPR+KS V  DYDLC+ C A
Sbjct:   36 NTGRTFHQGVRCDSCGVHPITGPRFKSKVKEDYDLCSICYA 76          
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A7N0TIZ8_KALFE (ZZ-type domain-containing protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TIZ8_KALFE)

HSP 1 Score: 63.2 bits (152), Expect = 6.430e-7
Identity = 31/58 (53.45%), Postives = 40/58 (68.97%), Query Frame = 0
Query:  251 NADAAVHRGVQCDVCGVCPITGPRYKSSVHADYDLCAAC-EAGGAAAEFSPYLKIPTP 307
            + D+  H GV+CDVCGV PITGPR+KS V  +YDLC+ C E  G  A+   Y++I TP
Sbjct:  276 SVDSVFHAGVECDVCGVHPITGPRFKSKVRYNYDLCSLCYEKSGNEAD---YVRIDTP 330          
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A7N0TJH4_KALFE (Uncharacterized protein n=1 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0TJH4_KALFE)

HSP 1 Score: 63.5 bits (153), Expect = 8.620e-7
Identity = 29/57 (50.88%), Postives = 39/57 (68.42%), Query Frame = 0
Query:  251 NADAAVHRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAAAEFSPYLKIPTP 307
            + D+  H GVQCDVCGV PITGPR+KS V  +YDLC+ C   G +   + Y++I +P
Sbjct:  230 SVDSVFHTGVQCDVCGVHPITGPRFKSKVRYNYDLCSLCY--GKSGNEADYVRIDSP 284          
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A5N5K5I0_9ROSI (Uncharacterized protein n=4 Tax=Salix TaxID=40685 RepID=A0A5N5K5I0_9ROSI)

HSP 1 Score: 63.5 bits (153), Expect = 8.860e-7
Identity = 32/53 (60.38%), Postives = 35/53 (66.04%), Query Frame = 0
Query:  257 HRGVQCDVCGVCPITGPRYKSSVHADYDLCAAC--EAGGAAAEFSPYLKIPTP 307
            HRGVQCD CGV PITGPRYKS V  DYDLC+ C  E G  A     Y+K+  P
Sbjct:  335 HRGVQCDGCGVLPITGPRYKSKVEVDYDLCSICFAEMGNEA----DYIKMDRP 383          
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Match: A0A6M2F1D7_9ROSI (Uncharacterized protein n=7 Tax=Populus TaxID=3689 RepID=A0A6M2F1D7_9ROSI)

HSP 1 Score: 63.5 bits (153), Expect = 9.090e-7
Identity = 31/51 (60.78%), Postives = 35/51 (68.63%), Query Frame = 0
Query:  257 HRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAAAEFSPYLKIPTP 307
            HRGVQCD CGV PITGPRYKS V  DYDLC+ C A  A    + Y+K+  P
Sbjct:  375 HRGVQCDGCGVHPITGPRYKSKVKEDYDLCSICFA--AVGNEADYIKMDRP 423          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|91923 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C969_9STRA8.780e-238100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6H5JI15_9PHAE3.320e-1157.58ZZ-type domain-containing protein n=1 Tax=Ectocarp... [more]
A0A2U1P8I9_ARTAN3.140e-762.75PB1 domain, Zinc finger, ZZ-type, UBA-like, Next t... [more]
C1N3F6_MICPC3.560e-754.72Predicted protein n=2 Tax=Micromonas pusilla TaxID... [more]
A0A7S3E329_9CHLO4.170e-749.15Hypothetical protein (Fragment) n=1 Tax=Chloropico... [more]
A0A835GVH0_9MAGN5.770e-760.98ZZ-type domain-containing protein n=1 Tax=Coptis c... [more]
A0A7N0TIZ8_KALFE6.430e-753.45ZZ-type domain-containing protein n=1 Tax=Kalancho... [more]
A0A7N0TJH4_KALFE8.620e-750.88Uncharacterized protein n=1 Tax=Kalanchoe fedtsche... [more]
A0A5N5K5I0_9ROSI8.860e-760.38Uncharacterized protein n=4 Tax=Salix TaxID=40685 ... [more]
A0A6M2F1D7_9ROSI9.090e-760.78Uncharacterized protein n=7 Tax=Populus TaxID=3689... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000433Zinc finger, ZZ-typeSMARTSM00291zz_5coord: 256..300
e-value: 2.9E-14
score: 63.4
IPR000433Zinc finger, ZZ-typePFAMPF00569ZZcoord: 257..291
e-value: 9.2E-11
score: 41.4
IPR000433Zinc finger, ZZ-typePROSITEPS01357ZF_ZZ_1coord: 262..289
IPR000433Zinc finger, ZZ-typePROSITEPS50135ZF_ZZ_2coord: 256..290
score: 11.251255
IPR000270PB1 domainSMARTSM00666PB1_newcoord: 3..96
e-value: 5.0E-6
score: 36.0
IPR000270PB1 domainPFAMPF00564PB1coord: 3..82
e-value: 2.0E-7
score: 30.8
IPR000270PB1 domainPROSITEPS51745PB1coord: 3..96
score: 13.85
NoneNo IPR availableGENE3D3.10.20.90coord: 1..79
e-value: 3.5E-9
score: 38.4
NoneNo IPR availableGENE3D1.10.8.10coord: 547..597
e-value: 1.8E-5
score: 26.3
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..136
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 525..561
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 89..130
NoneNo IPR availablePANTHERPTHR20930OVARIAN CARCINOMA ANTIGEN CA125-RELATEDcoord: 4..328
NoneNo IPR availableCDDcd05992PB1coord: 6..75
e-value: 1.188E-8
score: 50.3541
NoneNo IPR availableSUPERFAMILY54277CAD & PB1 domainscoord: 3..77
NoneNo IPR availableSUPERFAMILY57850RING/U-boxcoord: 254..310
IPR043145Zinc finger, ZZ-type superfamilyGENE3D3.30.60.90coord: 250..302
e-value: 4.5E-13
score: 50.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_8contigContig_8:700439..703871 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|91923mRNA_2791Tribonema minus UTEX_B_3156 mRNAContig_8 700282..704042 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|91923|CE91922_1228 ID=Trimin1|91923|CE91922_1228|Name=jgi.p|Trimin1|91923|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=611bp
MSTMELKVKYNDSIKRFAWLGSTIFVNLEREIQSRFNDLKTSEDSLRITY
VDDEGDEILIENDGDFATAYNHTRRAWSAAASSGSPPLLTLRVQRTASSH
RSNAAAGTASSTASDTPAASSTSTEQGANPPPRLSDFFAGLASAASSAAA
ASGASTASSTPAAVDPVAAAQAFMATALPAAISSIHAASGSAARGSGGSF
HDLVRNVMRNAATAAAAAADTAAAAAPEPAAETGAAAGEEQAAAAAAATQ
NADAAVHRGVQCDVCGVCPITGPRYKSSVHADYDLCAACEAGGAAAEFSP
YLKIPTPAQAPAVLVCVLRDGTHAGVLPFLSGCPGMRGMNFNNMNFGGGG
GECGMGGGGGGARCRRWRRRRQEAAAAAPAAAAADLSPPTASIFDSATPL
LIALDAAAATFGTATPASAAAAAAAADGSSDADEYDIVGPPSPAAAAPSA
AAAAAEPSAAVATAAVEPVAARASMVPDFDGAEETKEDGDVDVVADAQQQ
AAAAAATAPVSFAATAASAEEWAAALPRPEPVTPPVQSRATAPPQTQTPT
PDVSEESEKRRRAKRWQAELVRLAEMGFVDFARNLALLEKHVGAPGAGGM
TAVLNDLLSD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000433Znf_ZZ
IPR000270PB1_dom
IPR043145Znf_ZZ_sf