Trimin1|90877|CE90876_163 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|90877
Unique NameTrimin1|90877|CE90876_163
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length374
Homology
BLAST of jgi.p|Trimin1|90877 vs. uniprot
Match: A0A836C944_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C944_9STRA)

HSP 1 Score: 735 bits (1898), Expect = 6.860e-268
Identity = 373/373 (100.00%), Postives = 373/373 (100.00%), Query Frame = 0
Query:    1 MPSYIAVAATAGLALVGCGTDNAAAFNLMPAAARQPQPPRLRRLTSGCRRQWTTPTPRTEQISCFSRCTRLHARGKIFGEDDEAEEVVVPAEEFDDESLDVLTADMGGDEDDPFIASMRGGASDEDMLAGLTEEELEEQAVAVEVLQQYPDAPIVLVDDMGNVIGGVDPYADEENGLERGEPNVVGQNDEWPEVAGDTGGMDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTRGDLPEDSEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGEQWGN 373
            MPSYIAVAATAGLALVGCGTDNAAAFNLMPAAARQPQPPRLRRLTSGCRRQWTTPTPRTEQISCFSRCTRLHARGKIFGEDDEAEEVVVPAEEFDDESLDVLTADMGGDEDDPFIASMRGGASDEDMLAGLTEEELEEQAVAVEVLQQYPDAPIVLVDDMGNVIGGVDPYADEENGLERGEPNVVGQNDEWPEVAGDTGGMDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTRGDLPEDSEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGEQWGN
Sbjct:    1 MPSYIAVAATAGLALVGCGTDNAAAFNLMPAAARQPQPPRLRRLTSGCRRQWTTPTPRTEQISCFSRCTRLHARGKIFGEDDEAEEVVVPAEEFDDESLDVLTADMGGDEDDPFIASMRGGASDEDMLAGLTEEELEEQAVAVEVLQQYPDAPIVLVDDMGNVIGGVDPYADEENGLERGEPNVVGQNDEWPEVAGDTGGMDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTRGDLPEDSEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGEQWGN 373          
BLAST of jgi.p|Trimin1|90877 vs. uniprot
Match: D7FLF3_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLF3_ECTSI)

HSP 1 Score: 265 bits (676), Expect = 1.740e-82
Identity = 137/245 (55.92%), Postives = 179/245 (73.06%), Query Frame = 0
Query:  126 DMLAGLTEEELEEQAVAVEVLQQYPDAPIVLVDDMGNVIGGVDPYADEENGLERGEPNVVGQNDEWPEVAGDTGGMDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTRGDLPEDSEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGEQ 370
            D    L   E +E+ +A E+ +++PD   V VD  GN++GGV+P+   +  LE  +P       ++PEVAG   GMDDP DAPWR EAE+I+R +V+  GL CYDI+W+FH+LEVTVTR +     EEA YVDSD LM+AI+ VN ALE  EE L+VLGRHEL++ATPGAKD+LTTD++FKA+KGF+V+V  G     +RE+ GKL ERTFDEL++M+ GRKVRIPLALVDEVRLP A +E G++
Sbjct:  117 DFSDDLAAREQDEKRLAEELARKFPDIGRVKVDKFGNIVGGVNPFEGTDVKLED-QPIPDDDEKDFPEVAGVIAGMDDPADAPWRLEAEKIVRDQVQACGLTCYDILWTFHRLEVTVTRAEGDGPIEEAAYVDSDKLMQAIKGVNAALEAREEELFVLGRHELVVATPGAKDVLTTDKQFKAYKGFEVIVKAGGPFKKKRELKGKLLERTFDELMIMKAGRKVRIPLALVDEVRLPPALVEAGDE 360          
BLAST of jgi.p|Trimin1|90877 vs. uniprot
Match: A0A4D9D4Q5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4Q5_9STRA)

HSP 1 Score: 143 bits (360), Expect = 1.420e-35
Identity = 90/222 (40.54%), Postives = 124/222 (55.86%), Query Frame = 0
Query:  167 VDPYADEENGLERGEPNVVGQNDEWPEVAGDTGGMDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTR---GDLPEDSE---EAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLN---VQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPG------EQWGN 373
            +D  A EE   +  EP+     D  PE  G+  GMDDP DAPWR +AEE+IR  V E G + YD+ W  H + V +TR   G++  + E   +AG + SD +++  RAV +AL   +  L VL R  L + TPGAKD+LTT+REF+AF+G++V V   + +N        +G+L ER     +L  KG+ V IP  +V EVRLP A  E        E W N
Sbjct:   97 IDVTASEEGAGQENEPDW----DNIPEYGGEFLGMDDPLDAPWRLQAEEVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDGGNVESEGEGVADAGSLSSDEIVEVTRAVEEALLPHDNHLRVLQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADDFEVMDEGWAN 314          
BLAST of jgi.p|Trimin1|90877 vs. uniprot
Match: W7TJE5_9STRA (Ribosome maturation factor rimp n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJE5_9STRA)

HSP 1 Score: 141 bits (355), Expect = 4.640e-34
Identity = 88/222 (39.64%), Postives = 121/222 (54.50%), Query Frame = 0
Query:  167 VDPYADEENGLERGEPNVVGQNDEWPEVAGDTGGMDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTRGDLP------EDSEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLN---VQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPG------EQWGN 373
            +D  A EE   +  EP+     D  PE  G+  GMDDP DAPWR  AE++IR  V E G + YD+ W  H + V +TR D+       E   +AG + SD +++  RAV +AL   +  L +L R  L + TPGAKD+LTT+REF+AF+G++V V   + +N        +G+L ER     +L  KG+ V IP  +V EVRLP A  E        E W N
Sbjct:  207 IDVTASEEGAGQENEPDW----DNIPEYGGEFLGMDDPLDAPWRLHAEDVIRGAVTEAGYHTYDVTWHLHHVNVDITRQDVGNVENEGEGVADAGSLSSDEIVEVTRAVEEALLPHDNHLRILQRFHLCVGTPGAKDVLTTEREFQAFRGYEVQVSVTNPINESPTPNVRVGRLLERNPMHTILNVKGKNVTIPTGMVVEVRLPSAMHEADDFEVMEEGWAN 424          
BLAST of jgi.p|Trimin1|90877 vs. uniprot
Match: A0A7S2SW06_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SW06_9STRA)

HSP 1 Score: 129 bits (323), Expect = 9.160e-31
Identity = 78/179 (43.58%), Postives = 109/179 (60.89%), Query Frame = 0
Query:  194 VAGDTGGMDDPPDAPWRREAEEIIRREVEE-TGLNCYDIMWSFHKLEVTVTRGDLPEDSEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVV--LTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGE 369
            V G   G+DDP D  WR +AEE++R  V    G+  YD+ W+   L+V      L ++++E G VD   +  A RA+  ALE  +E L +L RHEL +++ GAK+IL ++REF+AFKGFDVVV  L    ++ +  + GKL  R   E  +  +GR VRIP  LV+EVRLP+A  EP E
Sbjct:  122 VYGIMNGLDDPRDVFWRLKAEELVRGAVRPLAGVRIYDVCWNIATLQVL-----LEQETDEGGAVDLKVVETAHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEANEEPVE 295          
BLAST of jgi.p|Trimin1|90877 vs. uniprot
Match: A0A7S2SV25_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SV25_9STRA)

HSP 1 Score: 112 bits (279), Expect = 8.950e-26
Identity = 67/159 (42.14%), Postives = 97/159 (61.01%), Query Frame = 0
Query:  214 EEIIRREVEE-TGLNCYDIMWSFHKLEVTVTRGDLPEDSEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVV--LTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGE 369
            +E++R  V    G+  YD+ W+   L+V      L ++++E G VD   +  A RA+  ALE  +E L +L RHEL +++ GAK+IL ++REF+AFKGFDVVV  L    ++ +  + GKL  R   E  +  +GR VRIP  LV+EVRLP+A  EP E
Sbjct:   12 QELVRGAVRPLAGVRIYDVCWNIATLQVL-----LEQETDEGGAVDLKVVETAHRAILDALEAHDEELQILTRHELEVSSKGAKNILDSEREFEAFKGFDVVVKTLAPDGIDKREPLYGKLVGRDVHETTINIRGRPVRIPNHLVEEVRLPEANEEPVE 165          
BLAST of jgi.p|Trimin1|90877 vs. uniprot
Match: A0A7S1TZY1_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TZY1_9STRA)

HSP 1 Score: 114 bits (284), Expect = 2.000e-25
Identity = 72/186 (38.71%), Postives = 107/186 (57.53%), Query Frame = 0
Query:  200 GMDDPPDAPWRREAEEIIRREVEET--GLNCYDIMWSFHKLEVTVTRGDLPEDSEEAGYVDSDALMKAI-RAVNQALEQEEERL----WVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLT-------GSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPGEQW 371
            GMDDP DAPWR EA   I   V+E        D++W+F  +++TVT        E+A    S A+++ + RA++  L   E  L    W L  H L + TPGA +++TT  +F+A+KGF V V+T       G      + + G LH RT +E+ L QKGR V++P+A+V EVRLP+ ++E G++W
Sbjct:  100 GMDDPLDAPWRLEAAAEIEELVKEKYPDAQAVDVLWAFSNVQITVT------PKEDANVPLSSAVIEMLTRAISDDLFPAEPELAHDHW-LTMHALSVCTPGASNVITTQEQFEAYKGFQVDVVTLGMPKSDGFAGVPGKTLTGTLHGRTTEEVHLNQKGRIVKVPIAMVSEVRLPEPELENGDKW 278          
BLAST of jgi.p|Trimin1|90877 vs. uniprot
Match: A0A7S2D135_9STRA (Hypothetical protein n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2D135_9STRA)

HSP 1 Score: 108 bits (269), Expect = 1.950e-23
Identity = 67/184 (36.41%), Postives = 103/184 (55.98%), Query Frame = 0
Query:  189 DEW----PEVAGDTGGMDDPPDAPWRREAEEIIRREVEE-TGLNCYDIMWSFHKLEVTVTRGDLPEDSEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQRE-VMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKME 366
            D+W    P   GD  G+DDP D  WR   +++IR  +    G++ YDI W+   L V +       ++EE+G V  + ++   +A+   LE  ++ L +L RH L +++ G  D+LT +R+F  FKGF+V V T ST + +R  ++G+L  R   E  + QKGR V+IP   V+EVRL   K E
Sbjct:  103 DDWDGRGPIERGDMNGLDDPRDVEWRIRGQDLIREAIAPLNGISVYDITWNIGDLTVFI-------ENEESG-VSMEDIIDCTKAIQDTLEPFDDELEILSRHTLEVSSKGIDDVLTAERQFITFKGFEVAVSTISTFSDRRAPILGRLVGRDVHETTINQKGRMVKIPNFYVEEVRLVKKKKE 278          
BLAST of jgi.p|Trimin1|90877 vs. uniprot
Match: A0A7S1DE94_CYCTE (Hypothetical protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1DE94_CYCTE)

HSP 1 Score: 103 bits (257), Expect = 3.170e-23
Identity = 55/118 (46.61%), Postives = 74/118 (62.71%), Query Frame = 0
Query:  251 SEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIPLALVDEVRLPDAKMEPG 368
            S+ A  VD+  +    + + + L+ +E RL +L RHELI+ATPGA D L T R+F A++GFDV+V T    N  R + GKL ER   +L++ +KGR V IPL  V  VRLP AK E G
Sbjct:   12 SDGAMVVDTSKISVIAKYILKGLDSQEHRLRILDRHELILATPGAPDTLETQRQFDAYRGFDVIVETVDPFNSNRVLTGKLVERNSMDLIIRKKGRMVTIPLNFVSSVRLPPAKREKG 129          
BLAST of jgi.p|Trimin1|90877 vs. uniprot
Match: A0A7S2PI76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2PI76_9STRA)

HSP 1 Score: 105 bits (262), Expect = 6.370e-23
Identity = 72/182 (39.56%), Postives = 94/182 (51.65%), Query Frame = 0
Query:  196 GDTGGMDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVT-----RGDLPEDSEEA---------------GYVDSDAL-MKAIRAVN----QALEQEEER-LWVLGRHELIIATPGAKDILTTDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRIP 351
            GD  G DDP DAPWR E E+IIR   E  G    D+ W      VT++     + D  E  EE                  V  DA+ M  +  V     +AL++ E+R L VL RHE+I+ +PG  ++L T R+F AFKGFDV+V T   L   R + GKL ERT  +  + QKG+KV IP
Sbjct:   42 GDPDGCDDPMDAPWRIEGEQIIRDAAESVGAVVEDVTWGMAMCTVTISDTTGVKKDTSEYLEERKKRDDEYPWMREERDAVVTEDAVDMSGVGVVAGTIIEALQEAEDRDLDVLSRHEIIVTSPGVSNVLETQRQFDAFKGFDVIVQTIDPLGSNRRLEGKLLERTALDTFITQKGKKVTIP 223          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|90877 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836C944_9STRA6.860e-268100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7FLF3_ECTSI1.740e-8255.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A4D9D4Q5_9STRA1.420e-3540.54Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TJE5_9STRA4.640e-3439.64Ribosome maturation factor rimp n=1 Tax=Nannochlor... [more]
A0A7S2SW06_9STRA9.160e-3143.58Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2SV25_9STRA8.950e-2642.14Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S1TZY1_9STRA2.000e-2538.71Hypothetical protein n=2 Tax=Phaeomonas parva TaxI... [more]
A0A7S2D135_9STRA1.950e-2336.41Hypothetical protein n=2 Tax=Dictyocha speculum Ta... [more]
A0A7S1DE94_CYCTE3.170e-2346.61Hypothetical protein n=1 Tax=Cyclophora tenuis Tax... [more]
A0A7S2PI76_9STRA6.370e-2339.56Hypothetical protein (Fragment) n=1 Tax=Leptocylin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 259..279
IPR036847Ribosome maturation factor RimP, C-terminal domain superfamilySUPERFAMILY74942YhbC-like, C-terminal domaincoord: 299..360

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_78contigContig_78:603263..609745 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|90877mRNA_12562Tribonema minus UTEX_B_3156 mRNAContig_78 603253..609868 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|90877|CE90876_163 ID=Trimin1|90877|CE90876_163|Name=jgi.p|Trimin1|90877|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=374bp
MPSYIAVAATAGLALVGCGTDNAAAFNLMPAAARQPQPPRLRRLTSGCRR
QWTTPTPRTEQISCFSRCTRLHARGKIFGEDDEAEEVVVPAEEFDDESLD
VLTADMGGDEDDPFIASMRGGASDEDMLAGLTEEELEEQAVAVEVLQQYP
DAPIVLVDDMGNVIGGVDPYADEENGLERGEPNVVGQNDEWPEVAGDTGG
MDDPPDAPWRREAEEIIRREVEETGLNCYDIMWSFHKLEVTVTRGDLPED
SEEAGYVDSDALMKAIRAVNQALEQEEERLWVLGRHELIIATPGAKDILT
TDREFKAFKGFDVVVLTGSTLNVQREVMGKLHERTFDELVLMQKGRKVRI
PLALVDEVRLPDAKMEPGEQWGN*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036847RimP_C_sf