Trimin1|79423|CE79422_757 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|79423
Unique Name	Trimin1\|79423\|CE79422_757
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	370

Homology

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BLAST of jgi.p|Trimin1|79423 vs. uniprot
Match: A0A836CB50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB50_9STRA)

HSP 1 Score: 615 bits (1587), Expect = 1.230e-220
Identity = 369/369 (100.00%), Postives = 369/369 (100.00%), Query Frame = 0

Query:    1 MTGSSGSPSTPYRRPTPSSPLCSTPPTTSPTKRRRTRFGRSTAGASPPHRHPTTQHCSPPAILSASTARGRGKRPMRAHSGPDHRGTSGANTTSPRRTLISSARLRAAHQVIIAGPTGIENPGGTRVQLTLDPARYVTAADLHVIRDTLRRLRPGMWGIDDSTLARPDLSDEHEAAVGDLARAAKKPKGKGKRRFDGXXXXXPAAKQPRTVKPSPFKRPAPLAAAARAGPESAFKRARTSVQVGGGXXXXXXXXXXXXGGSDWGYGMSRFFMDQREQQLELARQQEALAREQREFQANVLALLQNMQASLANAVAQRAQVNGVAQQLAALQNMLYPEAADNAAQEGAEAXXXXXXXXXXXXXXXEGYSA 369
            MTGSSGSPSTPYRRPTPSSPLCSTPPTTSPTKRRRTRFGRSTAGASPPHRHPTTQHCSPPAILSASTARGRGKRPMRAHSGPDHRGTSGANTTSPRRTLISSARLRAAHQVIIAGPTGIENPGGTRVQLTLDPARYVTAADLHVIRDTLRRLRPGMWGIDDSTLARPDLSDEHEAAVGDLARAAKKPKGKGKRRFDGXXXXXPAAKQPRTVKPSPFKRPAPLAAAARAGPESAFKRARTSVQVGGGXXXXXXXXXXXXGGSDWGYGMSRFFMDQREQQLELARQQEALAREQREFQANVLALLQNMQASLANAVAQRAQVNGVAQQLAALQNMLYPEAADNAAQEGAEAXXXXXXXXXXXXXXXEGYSA
Sbjct:    1 MTGSSGSPSTPYRRPTPSSPLCSTPPTTSPTKRRRTRFGRSTAGASPPHRHPTTQHCSPPAILSASTARGRGKRPMRAHSGPDHRGTSGANTTSPRRTLISSARLRAAHQVIIAGPTGIENPGGTRVQLTLDPARYVTAADLHVIRDTLRRLRPGMWGIDDSTLARPDLSDEHEAAVGDLARAAKKPKGKGKRRFDGXXXXXPAAKQPRTVKPSPFKRPAPLAAAARAGPESAFKRARTSVQVGGGXXXXXXXXXXXXGGSDWGYGMSRFFMDQREQQLELARQQEALAREQREFQANVLALLQNMQASLANAVAQRAQVNGVAQQLAALQNMLYPEAADNAAQEGAEAXXXXXXXXXXXXXXXEGYSA 369

[Close]

BLAST of jgi.p|Trimin1|79423 vs. uniprot
Match: A0A835YWZ9_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ9_9STRA)

HSP 1 Score: 356 bits (914), Expect = 1.870e-117
Identity = 235/259 (90.73%), Postives = 235/259 (90.73%), Query Frame = 0

Query:  111 VIIAGPTGIENPGGTRVQLTLDPARYVTAADLHVIRDTLRRLRPGMWGIDDSTLARPDLSDEHEAAVGDLARAAKKPKGKGKRRFDGXXXXXPAAKQPRTVKPSPFKRPAPLAAAARAGPESAFKRARTSVQVGGGXXXXXXXXXXXXGGSDWGYGMSRFFMDQREQQLELARQQEALAREQREFQANVLALLQNMQASLANAVAQRAQVNGVAQQLAALQNMLYPEAADNAAQEGAEAXXXXXXXXXXXXXXXEGYSA 369
            VIIAGPTGIENPGGTRVQLTLDPARYVTAADLHVIRDTLRRLRPGMWGIDDSTLARPDLSDEHEAAVGDLARAAKKPKGKGKRRFDGXXXXXPAAKQPRTVKPSPFKRPAPLAAAARAGPESAFKRARTSVQVGGGXXXXXXXXXXXXGGSDWGYGMSRFFMDQREQQLELAR                        ASLANAVAQRAQVNGVAQQLAALQNMLYPEAADNAAQEGAEAXXXXXXXXXXXXXXXEGYSA
Sbjct:  175 VIIAGPTGIENPGGTRVQLTLDPARYVTAADLHVIRDTLRRLRPGMWGIDDSTLARPDLSDEHEAAVGDLARAAKKPKGKGKRRFDGXXXXXPAAKQPRTVKPSPFKRPAPLAAAARAGPESAFKRARTSVQVGGGXXXXXXXXXXXXGGSDWGYGMSRFFMDQREQQLELARXXXXXXXXXXXXXXXXXXXXXXXXASLANAVAQRAQVNGVAQQLAALQNMLYPEAADNAAQEGAEAXXXXXXXXXXXXXXXEGYSA 433

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|79423 vs. uniprot

BLAST of jgi.p|Trimin1|79423 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CB50_9STRA	1.230e-220	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YWZ9_9STRA	1.870e-117	90.73	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 272..294
None	No IPR available	COILS	Coil	Coil	coord: 344..364
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 47..62
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..97
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 335..369
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 355..369

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_6	contig	Contig_6:816473..818677 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|79423	mRNA_2135	Tribonema minus UTEX_B_3156	mRNA	Contig_6 816339..818840 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|79423|CE79422_757 ID=Trimin1|79423|CE79422_757|Name=jgi.p|Trimin1|79423|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=370bp
MTGSSGSPSTPYRRPTPSSPLCSTPPTTSPTKRRRTRFGRSTAGASPPHR
HPTTQHCSPPAILSASTARGRGKRPMRAHSGPDHRGTSGANTTSPRRTLI
SSARLRAAHQVIIAGPTGIENPGGTRVQLTLDPARYVTAADLHVIRDTLR
RLRPGMWGIDDSTLARPDLSDEHEAAVGDLARAAKKPKGKGKRRFDGGGG
GGPAAKQPRTVKPSPFKRPAPLAAAARAGPESAFKRARTSVQVGGGGRCG
GGGGGGSAGGSDWGYGMSRFFMDQREQQLELARQQEALAREQREFQANVL
ALLQNMQASLANAVAQRAQVNGVAQQLAALQNMLYPEAADNAAQEGAEAG
AADAEAEHQDEEEDEGYSA*