mRNA_2135 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|79423
Unique Name	mRNA_2135
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|79423 vs. uniprot
Match: A0A836CB50_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB50_9STRA)

HSP 1 Score: 606 bits (1563), Expect = 2.500e-215
Identity = 362/362 (100.00%), Postives = 362/362 (100.00%), Query Frame = 2

Query:  185 PSTPYRRPTPSSPLCSTPPTTSPTKRRRTRFGRSTAGASPPHRHPTTQHCSPPAILSASTARGRGKRPMRAHSGPDHRGTSGANTTSPRRTLISSARLRAAHQVIIAGPTGIENPGGTRVQLTLDPARYVTAADLHVIRDTLRRLRPGMWGIDDSTLARPDLSDEHEAAVGDLARAAKKPKGKGKRRFDGXXXXXPAAKQPRTVKPSPFKRPAPLAAAARAGPESAFKRARTSVQVGGGXXXXXXXXXXXXGGSDWGYGMSRFFMDQREQQLELARQQEALAREQREFQANVLALLQNMQASLANAVAQRAQVNGVAQQLAALQNMLYPEAADNAAQEGAEAXXXXXXXXXXXXXXXEGYSA 1270
            PSTPYRRPTPSSPLCSTPPTTSPTKRRRTRFGRSTAGASPPHRHPTTQHCSPPAILSASTARGRGKRPMRAHSGPDHRGTSGANTTSPRRTLISSARLRAAHQVIIAGPTGIENPGGTRVQLTLDPARYVTAADLHVIRDTLRRLRPGMWGIDDSTLARPDLSDEHEAAVGDLARAAKKPKGKGKRRFDGXXXXXPAAKQPRTVKPSPFKRPAPLAAAARAGPESAFKRARTSVQVGGGXXXXXXXXXXXXGGSDWGYGMSRFFMDQREQQLELARQQEALAREQREFQANVLALLQNMQASLANAVAQRAQVNGVAQQLAALQNMLYPEAADNAAQEGAEAXXXXXXXXXXXXXXXEGYSA
Sbjct:    8 PSTPYRRPTPSSPLCSTPPTTSPTKRRRTRFGRSTAGASPPHRHPTTQHCSPPAILSASTARGRGKRPMRAHSGPDHRGTSGANTTSPRRTLISSARLRAAHQVIIAGPTGIENPGGTRVQLTLDPARYVTAADLHVIRDTLRRLRPGMWGIDDSTLARPDLSDEHEAAVGDLARAAKKPKGKGKRRFDGXXXXXPAAKQPRTVKPSPFKRPAPLAAAARAGPESAFKRARTSVQVGGGXXXXXXXXXXXXGGSDWGYGMSRFFMDQREQQLELARQQEALAREQREFQANVLALLQNMQASLANAVAQRAQVNGVAQQLAALQNMLYPEAADNAAQEGAEAXXXXXXXXXXXXXXXEGYSA 369

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BLAST of jgi.p|Trimin1|79423 vs. uniprot
Match: A0A835YWZ9_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWZ9_9STRA)

HSP 1 Score: 357 bits (916), Expect = 2.790e-116
Identity = 235/259 (90.73%), Postives = 235/259 (90.73%), Query Frame = 2

Query:  494 VIIAGPTGIENPGGTRVQLTLDPARYVTAADLHVIRDTLRRLRPGMWGIDDSTLARPDLSDEHEAAVGDLARAAKKPKGKGKRRFDGXXXXXPAAKQPRTVKPSPFKRPAPLAAAARAGPESAFKRARTSVQVGGGXXXXXXXXXXXXGGSDWGYGMSRFFMDQREQQLELARQQEALAREQREFQANVLALLQNMQASLANAVAQRAQVNGVAQQLAALQNMLYPEAADNAAQEGAEAXXXXXXXXXXXXXXXEGYSA 1270
            VIIAGPTGIENPGGTRVQLTLDPARYVTAADLHVIRDTLRRLRPGMWGIDDSTLARPDLSDEHEAAVGDLARAAKKPKGKGKRRFDGXXXXXPAAKQPRTVKPSPFKRPAPLAAAARAGPESAFKRARTSVQVGGGXXXXXXXXXXXXGGSDWGYGMSRFFMDQREQQLELAR                        ASLANAVAQRAQVNGVAQQLAALQNMLYPEAADNAAQEGAEAXXXXXXXXXXXXXXXEGYSA
Sbjct:  175 VIIAGPTGIENPGGTRVQLTLDPARYVTAADLHVIRDTLRRLRPGMWGIDDSTLARPDLSDEHEAAVGDLARAAKKPKGKGKRRFDGXXXXXPAAKQPRTVKPSPFKRPAPLAAAARAGPESAFKRARTSVQVGGGXXXXXXXXXXXXGGSDWGYGMSRFFMDQREQQLELARXXXXXXXXXXXXXXXXXXXXXXXXASLANAVAQRAQVNGVAQQLAALQNMLYPEAADNAAQEGAEAXXXXXXXXXXXXXXXEGYSA 433

[Close]

BLAST of jgi.p|Trimin1|79423 vs. uniprot
Match: A0A7D9IZG0_PARCT (Myosin heavy fast skeletal muscle (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9IZG0_PARCT)

HSP 1 Score: 69.7 bits (169), Expect = 3.570e-9
Identity = 35/112 (31.25%), Postives = 59/112 (52.68%), Query Frame = 1

Query:  157 IDDDWLIGIAINALPEAYAELTT-VLDSADNLTYEETKDKIRAFY-SRRITTAPPPDDA--ALLATGNPVCFNCKRKGQKANACPLRSRPSGDKWCEYHKSTSHSDLECQAQ 480
            + D  +I + +  LP++Y   +  V  SA  +T+ + K ++R+F  + ++ T P  D    A   +    C+ C ++G     CP +S     KWC YHKST+HSD  C++Q
Sbjct:  143 LSDGLIIAMTLKGLPDSYKPFSIHVTQSASEITFAKFKSRLRSFEETEKLNTKPKVDQVMKAEFPSQTMTCYGCGKRGHLVRECPAKSEK---KWCNYHKSTTHSDSTCRSQ 251

[Close]

BLAST of jgi.p|Trimin1|79423 vs. uniprot
Match: A0A7D9MJB2_PARCT (Myosin heavy fast skeletal muscle (Fragment) n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9MJB2_PARCT)

HSP 1 Score: 68.2 bits (165), Expect = 5.010e-9
Identity = 35/112 (31.25%), Postives = 58/112 (51.79%), Query Frame = 1

Query:  157 IDDDWLIGIAINALPEAYAELTT-VLDSADNLTYEETKDKIRAFY-SRRITTAPPPDDA--ALLATGNPVCFNCKRKGQKANACPLRSRPSGDKWCEYHKSTSHSDLECQAQ 480
            + D  +I + +  LP++Y   +  V  SA  +T+ + K  +R+F  + ++ T P  D    A   +    C+ C ++G     CP +S     KWC YHKST+HSD  C++Q
Sbjct:  143 LSDGLIIAMILKGLPDSYKPFSIHVTQSASEITFAKFKSMLRSFEETEKLNTKPKVDQVIKAEFPSQTMTCYGCGKRGHLVRECPAKSEK---KWCNYHKSTTHSDSTCRSQ 251

[Close]

BLAST of jgi.p|Trimin1|79423 vs. uniprot
Match: A0A6S7KN23_PARCT (Myosin heavy fast skeletal muscle (Fragment) n=7 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7KN23_PARCT)

HSP 1 Score: 68.9 bits (167), Expect = 7.970e-9
Identity = 42/161 (26.09%), Postives = 77/161 (47.83%), Query Frame = 1

Query:   10 YETKTRAQKIQLLSELMRIKLTPSQDPEELFTKVNEVVKQLSYWENLRNIDDDWLIGIAINALPEAYAELTT-VLDSADNLTYEETKDKIRAFY-SRRITTAPPPDDA--ALLATGNPVCFNCKRKGQKANACPLRSRPSGDKWCEYHKSTSHSDLECQAQ 480
            YE + + + I L +EL  ++    +   +   +  + +  L   +    + D  +I + +  LP++Y   +  V  SA  +T+ + K  +R+F  + ++ T P  D    A   +    C+ C ++G     CP +S     KWC YHKST+HSD  C++Q
Sbjct:   96 YENQGKPRIITLYTELTSLEKALHETVTDYLIRAEKAITALKNAKE--TLSDGLIIAMILKGLPDSYKPFSIHVTQSASEITFAKFKSMLRSFEETEKLNTKPKVDQVMKAEFPSQTMTCYGCGKRGHLVRECPAKSEK---KWCNYHKSTTHSDSTCRSQ 251

[Close]

BLAST of jgi.p|Trimin1|79423 vs. uniprot
Match: A0A6S7I9F2_PARCT (Myosin heavy fast skeletal muscle (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7I9F2_PARCT)

HSP 1 Score: 68.6 bits (166), Expect = 1.160e-8
Identity = 35/112 (31.25%), Postives = 58/112 (51.79%), Query Frame = 1

Query:  157 IDDDWLIGIAINALPEAYAELTT-VLDSADNLTYEETKDKIRAFY-SRRITTAPPPDDA--ALLATGNPVCFNCKRKGQKANACPLRSRPSGDKWCEYHKSTSHSDLECQAQ 480
            + D  +I + +  LP++Y   +  V  SA  +T+ + K  +R+F  + ++ T P  D    A   +    C+ C ++G     CP +S     KWC YHKST+HSD  C++Q
Sbjct:  143 LSDGLIIAMILKGLPDSYKPFSIHVTQSASEITFAKVKSMLRSFEETEKLNTKPKIDQVMKAEFPSQTMTCYGCGKRGHLVRECPAKSEK---KWCNYHKSTTHSDSTCRSQ 251

[Close]

BLAST of jgi.p|Trimin1|79423 vs. uniprot
Match: A0A7D9EP18_PARCT (Myosin heavy fast skeletal muscle n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9EP18_PARCT)

HSP 1 Score: 68.2 bits (165), Expect = 1.860e-8
Identity = 35/112 (31.25%), Postives = 58/112 (51.79%), Query Frame = 1

Query:  157 IDDDWLIGIAINALPEAYAELTT-VLDSADNLTYEETKDKIRAFY-SRRITTAPPPDDA--ALLATGNPVCFNCKRKGQKANACPLRSRPSGDKWCEYHKSTSHSDLECQAQ 480
            + D  +I + +  LP++Y   +  V  SA  +T+ + K  +R+F  + ++ T P  D    A   +    C+ C ++G     CP +S     KWC YHKST+HSD  C++Q
Sbjct:  143 LSDGLIIAMILKGLPDSYKPFSIHVTQSASEITFAKFKSMLRSFEETEKLNTKPKVDQVMKAEFPSQTMTCYGCGKRGHLVRECPAKSEK---KWCNYHKSTTHSDSTCRSQ 251

[Close]

BLAST of jgi.p|Trimin1|79423 vs. uniprot
Match: A0A6S7G9U2_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7G9U2_PARCT)

HSP 1 Score: 68.2 bits (165), Expect = 2.360e-8
Identity = 35/112 (31.25%), Postives = 58/112 (51.79%), Query Frame = 1

Query:  157 IDDDWLIGIAINALPEAYAELTT-VLDSADNLTYEETKDKIRAFY-SRRITTAPPPDDA--ALLATGNPVCFNCKRKGQKANACPLRSRPSGDKWCEYHKSTSHSDLECQAQ 480
            + D  +I + +  LP++Y   +  V  SA  +T+ + K  +R+F  + ++ T P  D    A   +    C+ C ++G     CP +S     KWC YHKST+HSD  C++Q
Sbjct:  143 LSDGLIIAMILKGLPDSYKPFSIHVTQSASEITFAKFKSMLRSFEETEKLNTKPKVDQVMKAEFPSQTMTCYGCGKRGHLVRECPAKSEK---KWCNYHKSTTHSDSTCRSQ 251

[Close]

BLAST of jgi.p|Trimin1|79423 vs. uniprot
Match: A0A6S7FHS0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7FHS0_PARCT)

HSP 1 Score: 67.8 bits (164), Expect = 2.920e-8
Identity = 35/112 (31.25%), Postives = 58/112 (51.79%), Query Frame = 1

Query:  157 IDDDWLIGIAINALPEAYAELTT-VLDSADNLTYEETKDKIRAFY-SRRITTAPPPDDA--ALLATGNPVCFNCKRKGQKANACPLRSRPSGDKWCEYHKSTSHSDLECQAQ 480
            + D  +I + +  LP++Y   +  V  SA  +T+ + K  +R+F  + ++ T P  D    A   +    C+ C ++G     CP +S     KWC YHKST+HSD  C++Q
Sbjct:  143 LSDGLIIAMILKGLPDSYKPFSIHVTQSASEITFAKFKSMLRSFEETEKLNTKPKIDQVMKAEFPSQTMTCYGCGKRGHLVRECPAKSEK---KWCNYHKSTTHSDSTCRSQ 251

[Close]

BLAST of jgi.p|Trimin1|79423 vs. uniprot
Match: A0A7D9HR84_PARCT (Myosin heavy fast skeletal muscle n=3 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HR84_PARCT)

HSP 1 Score: 67.4 bits (163), Expect = 3.610e-8
Identity = 35/112 (31.25%), Postives = 57/112 (50.89%), Query Frame = 1

Query:  157 IDDDWLIGIAINALPEAYAELTT-VLDSADNLTYEETKDKIRAFY-SRRITTAPPPDDA--ALLATGNPVCFNCKRKGQKANACPLRSRPSGDKWCEYHKSTSHSDLECQAQ 480
            + D  +I + +  LP++Y   +  V  SA  +T+ + K  +R+F  + ++ T P  D    A        C+ C ++G     CP +S     KWC YHKST+HSD  C++Q
Sbjct:  143 LSDGLIIAMILKGLPDSYKPFSIHVTQSASEITFAKFKSMLRSFEETEKLNTKPKVDQVMKAEFPLQTMTCYGCGKRGHLVRECPAKSEK---KWCNYHKSTTHSDSTCRSQ 251

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|79423 vs. uniprot

BLAST of jgi.p|Trimin1|79423 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 17


Match Name	E-value	Identity	Description
A0A836CB50_9STRA	2.500e-215	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YWZ9_9STRA	2.790e-116	90.73	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A7D9IZG0_PARCT	3.570e-9	31.25	Myosin heavy fast skeletal muscle (Fragment) n=4 T...	[more]
A0A7D9MJB2_PARCT	5.010e-9	31.25	Myosin heavy fast skeletal muscle (Fragment) n=1 T...	[more]
A0A6S7KN23_PARCT	7.970e-9	26.09	Myosin heavy fast skeletal muscle (Fragment) n=7 T...	[more]
A0A6S7I9F2_PARCT	1.160e-8	31.25	Myosin heavy fast skeletal muscle (Fragment) n=4 T...	[more]
A0A7D9EP18_PARCT	1.860e-8	31.25	Myosin heavy fast skeletal muscle n=2 Tax=Paramuri...	[more]
A0A6S7G9U2_PARCT	2.360e-8	31.25	Retrovirus-related Pol poly from transposon TNT 1-...	[more]
A0A6S7FHS0_PARCT	2.920e-8	31.25	Retrovirus-related Pol poly from transposon TNT 1-...	[more]
A0A7D9HR84_PARCT	3.610e-8	31.25	Myosin heavy fast skeletal muscle n=3 Tax=Paramuri...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_6	contig	Contig_6:816339..818840 -

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|79423\|CE79422_757
Hectar predicted targeting category	other localisation
TranscriptId	79745
Track	FilteredModels1
ProteinId	79423

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|79423	gene_2135	Tribonema minus UTEX_B_3156	gene	Contig_6 816339..818840 -

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_2135_2	exon_2135_2	Tribonema minus UTEX_B_3156	exon	Contig_6 816339..817252 -
exon_2135_1	exon_2135_1	Tribonema minus UTEX_B_3156	exon	Contig_6 818348..818840 -

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_2135	UTR3_2135	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_6 816339..816472 -

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_2135	CDS_2135	Tribonema minus UTEX_B_3156	CDS	Contig_6 818348..818677 -

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR5_2135	UTR5_2135	Tribonema minus UTEX_B_3156	five_prime_UTR	Contig_6 818678..818840 -

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|79423	Trimin1\|79423\|CE79422_757	Tribonema minus UTEX_B_3156	polypeptide	Contig_6 816473..818677 -

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_6:816339..818840-
coding sequence from alignment at Contig_6:816339..818840-

spliced messenger RNA

>mRNA_2135 ID=mRNA_2135|Name=jgi.p|Trimin1|79423|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1407bp|location=Sequence derived from alignment at Contig_6:816339..818840- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
CTCAACAGGTACGAGACCAAGACCAGAGCACAGAAAATACAGCTGCTCAG
CGAGCTGATGCGGATCAAGCTCACCCCTTCTCAAGACCCAGAGGAGCTCT
TCACCAAGGTCAACGAAGTCGTCAAACAGCTCTCTTACTGGGAAAACCTC
CGCAACATCGACGATGACTGGCTCATCGGGATCGCCATCAACGCCTTACC
GGAGGCCTACGCCGAGCTCACCACTGTGCTCGACTCCGCCGACAACCTCA
CCTACGAAGAGACGAAGGACAAGATTCGGGCGTTCTACAGCCGGCGCATC
ACCACCGCACCGCCACCCGACGACGCAGCACTGCTCGCCACCGGCAATCC
TGTCTGCTTCAACTGCAAGAGGAAGGGGCAAAAGGCCAATGCGTGCCCAC
TCAGGTCCAGACCATCGGGGGACAAGTGGTGCGAATACCACAAGTCCACG
TCGCACTCTGATCTCGAGTGCCAGGCTCAGGGCCGCACACCAGGTGATCA
TCGCCGGGCCGACAGGCATCGAAAACCCGGGCGGCACTCGCGTGCAGCTC
ACGCTCGACCCTGCGCGTTACGTCACTGCTGCCGACCTCCACGTCATCAG
GGACACGCTGCGCAGACTCCGCCCGGGCATGTGGGGCATCGACGACTCCA
CGCTGGCGAGGCCTGACCTGTCGGACGAGCACGAGGCTGCCGTCGGCGAC
CTCGCGCGTGCCGCCAAGAAGCCCAAGGGGAAGGGCAAGCGTCGTTTCGA
TGGCGGCGGCGGTGGTGGGCCTGCTGCGAAGCAGCCACGCACCGTGAAGC
CGTCGCCGTTCAAGCGCCCTGCCCCTTTGGCCGCCGCTGCTCGTGCCGGC
CCCGAGAGCGCCTTCAAGCGCGCACGCACTTCTGTGCAGGTGGGCGGCGG
CGGCAGGTGCGGCGGCGGCGGCGGCGGTGGCAGCGCTGGCGGCAGCGACT
GGGGCTACGGCATGAGCCGTTTCTTCATGGACCAACGGGAGCAGCAGCTT
GAGCTGGCCCGTCAGCAGGAGGCGCTGGCGCGCGAGCAGCGCGAGTTCCA
AGCGAACGTGCTCGCACTGCTGCAAAACATGCAGGCGTCGCTGGCCAACG
CGGTCGCCCAGCGCGCCCAGGTGAACGGTGTCGCTCAGCAGCTGGCCGCT
CTGCAGAACATGCTGTATCCGGAGGCGGCGGACAACGCGGCGCAGGAGGG
GGCCGAGGCTGGGGCGGCGGACGCGGAGGCGGAGCACCAGGACGAAGAGG
AGGACGAGGGATACAGTGCCTAGGTTGTGTGCGGCGGACACGCACACACC
TGTCGTTTGTAGTGGGAATACTGCTTTGTCTTGTGCCTTGGGGCACGTGG
GGGCGAGGGGGAGTACAGAGCGGATGTTGTGATGTGCAGGACGCACAACA
CTTGTCG

protein sequence of jgi.p|Trimin1|79423

>Trimin1|79423|CE79422_757 ID=Trimin1|79423|CE79422_757|Name=jgi.p|Trimin1|79423|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=370bp
MTGSSGSPSTPYRRPTPSSPLCSTPPTTSPTKRRRTRFGRSTAGASPPHR
HPTTQHCSPPAILSASTARGRGKRPMRAHSGPDHRGTSGANTTSPRRTLI
SSARLRAAHQVIIAGPTGIENPGGTRVQLTLDPARYVTAADLHVIRDTLR
RLRPGMWGIDDSTLARPDLSDEHEAAVGDLARAAKKPKGKGKRRFDGGGG
GGPAAKQPRTVKPSPFKRPAPLAAAARAGPESAFKRARTSVQVGGGGRCG
GGGGGGSAGGSDWGYGMSRFFMDQREQQLELARQQEALAREQREFQANVL
ALLQNMQASLANAVAQRAQVNGVAQQLAALQNMLYPEAADNAAQEGAEAG
AADAEAEHQDEEEDEGYSA*

mRNA from alignment at Contig_6:816339..818840-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_2135 ID=mRNA_2135|Name=jgi.p|Trimin1|79423|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=2502bp|location=Sequence derived from alignment at Contig_6:816339..818840- (Tribonema minus UTEX_B_3156 )
CTCAACAGGTACGAGACCAAGACCAGAGCACAGAAAATACAGCTGCTCAG
CGAGCTGATGCGGATCAAGCTCACCCCTTCTCAAGACCCAGAGGAGCTCT
TCACCAAGGTCAACGAAGTCGTCAAACAGCTCTCTTACTGGGAAAACCTC
CGCAACATCGACGATGACTGGCTCATCGGGATCGCCATCAACGCCTTACC
GGAGGCCTACGCCGAGCTCACCACTGTGCTCGACTCCGCCGACAACCTCA
CCTACGAAGAGACGAAGGACAAGATTCGGGCGTTCTACAGCCGGCGCATC
ACCACCGCACCGCCACCCGACGACGCAGCACTGCTCGCCACCGGCAATCC
TGTCTGCTTCAACTGCAAGAGGAAGGGGCAAAAGGCCAATGCGTGCCCAC
TCAGGTCCAGACCATCGGGGGACAAGTGGTGCGAATACCACAAGTCCACG
TCGCACTCTGATCTCGAGTGCCAGGCTCAGGGCCGCACACCAGGTACGAA
GCCTAGACCGAACGTAGGCTTCTAGCGTGAGCCACGTCAGAGCCAGAGGG
GGCTCCAGGATATGTGCAGTAGCCAAGACTCATGTTGAGTGCGAGAGGGG
GTGTCGGAATATGGTCATGTACACCCTCACATGAGTCTAGTGTAGCATAC
CGCAGCAGCTGTAGCAAGAGCTGCTGTCATCCTAGTGTGTGCGCAAGAGC
GGTGAAATGCCCCCATCCCCAGGAGAGTCATGACTGGGTGCGCTATCCTG
TAGCGTAGCGATGCTCAGCAGTAGCAGGGTTCACCAGCAGGTTGAACTGT
ACATGTTGAAGTTTGCTGGTCAACTTCAAGTACATGTTGAAGTAGGAAGT
TGAACTTGAGGTTGTGACATCGGCCACTTGTAGTTACAGTTCGGCCTGTC
GGCACATCGGCCAGTTGCATCAGGCCGGTTCTACAGAGTTCTTGAGTTCT
CTGGAGTTCTCGGCTTCTCTGGAGTTCGGCACCTTGGAAGGTCGCCTCAC
TCCCATCAATTCACTCTCTCTTCTACACACGGCCAAGCCGGAGTCTCTCT
TCCTCCTGCCTCGTGCCCTTGCTCCTGCCTGGTCACTTGCTGGAGACTCC
TGCTAGATCCTTCGCTTCCGACAGGGTCTCTATGCCATGGGACTGTGTGT
GAACGCTGCTGTCATCTATGCCATGGGACTGTGTGTGAACGCTGCTGTCA
TCGGAGAAACGATGGATAAGCGACGCGAGTCTAATTCGCGTCTGCAAGTG
TACAATGCAGTCGTAATTAGTTACTCTCCGCACAATCCTGTATGGGTGTT
TCTGTTGACAACAGGTGGCAACACGCACTTCCAGTTACTTGTGCGAGGCG
ACAGCACCAGCGAATGCGTGTGCCCGACGTTCTCTGCCGCTGAAGCTGGC
ATTATACTAACGAAGTGTGGTGCAGCCTATCCGAGAACGAGCACTGATCC
ATGTGACAGCGTTCAGCATTGTCTAGCTCTCTCGGAGGATTTTGTTTATT
TCTGATGCAGCACGGTTAATACGAGGTGCATGATCGGCACTTGTGCAGGG
TCACTGAGCATGCGCCATGCACAATGTCGTGCTTGCAGGTGATCATCGCC
GGGCCGACAGGCATCGAAAACCCGGGCGGCACTCGCGTGCAGCTCACGCT
CGACCCTGCGCGTTACGTCACTGCTGCCGACCTCCACGTCATCAGGGACA
CGCTGCGCAGACTCCGCCCGGGCATGTGGGGCATCGACGACTCCACGCTG
GCGAGGCCTGACCTGTCGGACGAGCACGAGGCTGCCGTCGGCGACCTCGC
GCGTGCCGCCAAGAAGCCCAAGGGGAAGGGCAAGCGTCGTTTCGATGGCG
GCGGCGGTGGTGGGCCTGCTGCGAAGCAGCCACGCACCGTGAAGCCGTCG
CCGTTCAAGCGCCCTGCCCCTTTGGCCGCCGCTGCTCGTGCCGGCCCCGA
GAGCGCCTTCAAGCGCGCACGCACTTCTGTGCAGGTGGGCGGCGGCGGCA
GGTGCGGCGGCGGCGGCGGCGGTGGCAGCGCTGGCGGCAGCGACTGGGGC
TACGGCATGAGCCGTTTCTTCATGGACCAACGGGAGCAGCAGCTTGAGCT
GGCCCGTCAGCAGGAGGCGCTGGCGCGCGAGCAGCGCGAGTTCCAAGCGA
ACGTGCTCGCACTGCTGCAAAACATGCAGGCGTCGCTGGCCAACGCGGTC
GCCCAGCGCGCCCAGGTGAACGGTGTCGCTCAGCAGCTGGCCGCTCTGCA
GAACATGCTGTATCCGGAGGCGGCGGACAACGCGGCGCAGGAGGGGGCCG
AGGCTGGGGCGGCGGACGCGGAGGCGGAGCACCAGGACGAAGAGGAGGAC
GAGGGATACAGTGCCTAGGTTGTGTGCGGCGGACACGCACACACCTGTCG
TTTGTAGTGGGAATACTGCTTTGTCTTGTGCCTTGGGGCACGTGGGGGCG
AGGGGGAGTACAGAGCGGATGTTGTGATGTGCAGGACGCACAACACTTGT
CG

Coding sequence (CDS) from alignment at Contig_6:816339..818840-

>mRNA_2135 ID=mRNA_2135|Name=jgi.p|Trimin1|79423|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1110bp|location=Sequence derived from alignment at Contig_6:816339..818840- (Tribonema minus UTEX_B_3156 )
ATGACTGGCTCATCGGGATCGCCATCAACGCCTTACCGGAGGCCTACGCC
GAGCTCACCACTGTGCTCGACTCCGCCGACAACCTCACCTACGAAGAGAC
GAAGGACAAGATTCGGGCGTTCTACAGCCGGCGCATCACCACCGCACCGC
CACCCGACGACGCAGCACTGCTCGCCACCGGCAATCCTGTCTGCTTCAAC
TGCAAGAGGAAGGGGCAAAAGGCCAATGCGTGCCCACTCAGGTCCAGACC
ATCGGGGGACAAGTGGTGCGAATACCACAAGTCCACGTCGCACTCTGATC
TCGAGTGCCAGGCTCAGGGCCGCACACCAGGTGATCATCGCCGGGCCGAC
AGGCATCGAAAACCCGGGCGGCACTCGCGTGCAGCTCACGCTCGACCCTG
CGCGTTACGTCACTGCTGCCGACCTCCACGTCATCAGGGACACGCTGCGC
AGACTCCGCCCGGGCATGTGGGGCATCGACGACTCCACGCTGGCGAGGCC
TGACCTGTCGGACGAGCACGAGGCTGCCGTCGGCGACCTCGCGCGTGCCG
CCAAGAAGCCCAAGGGGAAGGGCAAGCGTCGTTTCGATGGCGGCGGCGGT
GGTGGGCCTGCTGCGAAGCAGCCACGCACCGTGAAGCCGTCGCCGTTCAA
GCGCCCTGCCCCTTTGGCCGCCGCTGCTCGTGCCGGCCCCGAGAGCGCCT
TCAAGCGCGCACGCACTTCTGTGCAGGTGGGCGGCGGCGGCAGGTGCGGC
GGCGGCGGCGGCGGTGGCAGCGCTGGCGGCAGCGACTGGGGCTACGGCAT
GAGCCGTTTCTTCATGGACCAACGGGAGCAGCAGCTTGAGCTGGCCCGTC
AGCAGGAGGCGCTGGCGCGCGAGCAGCGCGAGTTCCAAGCGAACGTGCTC
GCACTGCTGCAAAACATGCAGGCGTCGCTGGCCAACGCGGTCGCCCAGCG
CGCCCAGGTGAACGGTGTCGCTCAGCAGCTGGCCGCTCTGCAGAACATGC
TGTATCCGGAGGCGGCGGACAACGCGGCGCAGGAGGGGGCCGAGGCTGGG
GCGGCGGACGCGGAGGCGGAGCACCAGGACGAAGAGGAGGACGAGGGATA
CAGTGCCTAG