Trimin1|66468|CE66467_86 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|66468
Unique NameTrimin1|66468|CE66467_86
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length160
Homology
BLAST of jgi.p|Trimin1|66468 vs. uniprot
Match: A0A836CCN6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCN6_9STRA)

HSP 1 Score: 307 bits (786), Expect = 1.570e-105
Identity = 159/159 (100.00%), Postives = 159/159 (100.00%), Query Frame = 0
Query:    1 MAKPKYLPPDSLSDEDVARLNDVRKQVWKGGALGLVNGSVLGFIASRLGARYSPALRKLSTTNYTMLCVMASGALGSFLGATVSGKKSVVYIGDIFTRGATDQVKTEYQEKAVEAGGGWRAQQQNMEDAMRESHARRMRALELHRQSRDNGATFESDRK 159
            MAKPKYLPPDSLSDEDVARLNDVRKQVWKGGALGLVNGSVLGFIASRLGARYSPALRKLSTTNYTMLCVMASGALGSFLGATVSGKKSVVYIGDIFTRGATDQVKTEYQEKAVEAGGGWRAQQQNMEDAMRESHARRMRALELHRQSRDNGATFESDRK
Sbjct:    1 MAKPKYLPPDSLSDEDVARLNDVRKQVWKGGALGLVNGSVLGFIASRLGARYSPALRKLSTTNYTMLCVMASGALGSFLGATVSGKKSVVYIGDIFTRGATDQVKTEYQEKAVEAGGGWRAQQQNMEDAMRESHARRMRALELHRQSRDNGATFESDRK 159          
BLAST of jgi.p|Trimin1|66468 vs. uniprot
Match: A0A7S2GKJ3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GKJ3_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.320e-16
Identity = 48/108 (44.44%), Postives = 64/108 (59.26%), Query Frame = 0
Query:    6 YLPPDSLSDEDVARLNDVRKQVWKGGALGLVNGSVLGFIASRLGARYSPALR---KLSTTNYTMLCVMASGALGSFLGATVSGKKSVVYIGDIFTRGATDQVKTEYQE 110
            + PPD+LSD+DV ++ DVR+ VW GG  GL  G  +G        R+ P      K    NY  L  + +GA+GS +GATVSGK SV  + DI++RGA  +  TEYQE
Sbjct:   23 FTPPDTLSDDDVRQVADVRRAVWTGGLKGLAVGLFVGACGHSGAVRWLPKNMFPVKFRNANYLFLYTLGAGAIGSLVGATVSGKNSVHMMTDIYSRGAKPKF-TEYQE 129          
BLAST of jgi.p|Trimin1|66468 vs. uniprot
Match: A0A7S2KDW0_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KDW0_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 3.630e-11
Identity = 44/118 (37.29%), Postives = 62/118 (52.54%), Query Frame = 0
Query:    6 YLPPDSLSDEDVARLNDVRKQVWKGGALGLVNGSVLGFIASRLGARYSPALRKLSTT---------NYTMLCVMASGALGSFLGATVSGKKSVVYIGDIFTRGATDQVKTEYQEKAVE 114
            Y  PDSL+DED+ RLNDVR+++W  GA G+V GSV G     L   +    +  S T         N   L VM  G +GS+L A ++G +SV  +  +F RG +    +E  +  VE
Sbjct:    7 YERPDSLTDEDMQRLNDVRREMWVNGAKGMVFGSVGGITGLSLFDMFEQKKKGRSLTLPPRFTYGRNNAFLAVMLGGVVGSYLSARLTGIRSVRDLYPVFERGISHPKPSEELDSIVE 124          
BLAST of jgi.p|Trimin1|66468 vs. uniprot
Match: D8LNR6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNR6_ECTSI)

HSP 1 Score: 64.3 bits (155), Expect = 1.490e-9
Identity = 56/166 (33.73%), Postives = 83/166 (50.00%), Query Frame = 0
Query:   10 DSLSDEDVARLNDVRKQVWK--------GGALGLVNGSVLGFIASRLGARYSP-----ALRKLSTTNYTMLCVMASGALGSFLGATVSGKKSVVYIGDIFTR----GATDQVKTEYQEKAVEAGGGWRAQQQNMEDAMRESHARRMRALELHRQS--RDNGATFES 156
            + LSDEDV RLN+VRKQ+W         GGA GL N  +   + ++    +       +L  L   +Y M C + +GA G FLGA + G +    + DI+ R    G T+Q +T     A+ +     A + ++  A  +SHARRM A+ L RQ    +   TF+S
Sbjct:   53 EDLSDEDVNRLNNVRKQIWAAGYTGFFLGGAWGLANCVIYKALQAKAVEHFPKQSAIKSLPVLQNKHYVM-CTLVAGATGMFLGAGMGGIRGNEDLRDIYDRRTGGGLTEQQET----PALPSHLPRDAPEHHVAKASADSHARRMEAIRLKRQQDKAERDGTFKS 213          
BLAST of jgi.p|Trimin1|66468 vs. uniprot
Match: A0A7S2S5E0_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2S5E0_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 1.690e-5
Identity = 36/95 (37.89%), Postives = 53/95 (55.79%), Query Frame = 0
Query:    6 YLPPDSLSDEDVARLNDVRKQVWKGGALGLVNGSVLGF----IASRLGARYSPALR-KLS---------TTNYTMLCVMASGALGSFLGATVSGK 86
            +LPP+SLS ED+  + DVR+ VWK G  GL+ G+V G+    ++  + +R S A + KL+         T N   L VM   +L SF  A+ +GK
Sbjct:    5 FLPPESLSKEDIRVIADVRRDVWKSGMSGLLIGAVSGYFIHSVSKIIYSRLSDASKLKLTIPGENPIRFTRNTAFLSVMLGSSLTSFAFASAAGK 99          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|66468 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
A0A836CCN6_9STRA1.570e-105100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2GKJ3_9STRA1.320e-1644.44Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2KDW0_9STRA3.630e-1137.29Hypothetical protein n=1 Tax=Leptocylindrus danicu... [more]
D8LNR6_ECTSI1.490e-933.73Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A7S2S5E0_9STRA1.690e-537.89Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 130..159

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_42contigContig_42:33277..34114 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|66468mRNA_5598Tribonema minus UTEX_B_3156 mRNAContig_42 33140..34343 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|66468|CE66467_86 ID=Trimin1|66468|CE66467_86|Name=jgi.p|Trimin1|66468|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=160bp
MAKPKYLPPDSLSDEDVARLNDVRKQVWKGGALGLVNGSVLGFIASRLGA
RYSPALRKLSTTNYTMLCVMASGALGSFLGATVSGKKSVVYIGDIFTRGA
TDQVKTEYQEKAVEAGGGWRAQQQNMEDAMRESHARRMRALELHRQSRDN
GATFESDRK*
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