Trimin1|64268|CE64267_179 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|64268
Unique NameTrimin1|64268|CE64267_179
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length207
Homology
BLAST of jgi.p|Trimin1|64268 vs. uniprot
Match: A0A835YTJ1_9STRA (GTPase Ypt3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTJ1_9STRA)

HSP 1 Score: 339 bits (869), Expect = 1.210e-116
Identity = 205/206 (99.51%), Postives = 205/206 (99.51%), Query Frame = 0
Query:    1 MGDDPVKVVLLGNSGVGKSNLIARYHANEFSNEFMSTIGVEFVTKKIEVDGVAIRLQIWDTAGQERYASMMKTYYRKAKGALLVYDVTSQSSFDSLEIWRKNLEANADPQCVSMVAGNKCDMEGVVDEAAARAYADAHSMGFMMTSAKTAQNVDTLFEEVARRIIATMAAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXQSSDCC 206
            MGDDPVKVVLLGNSGVGKSNLIARYHANEFSNEFMSTIGVEFVTKKIEVDGVAIRLQIWDTAGQERYASMMKTYYRKAKGALLVYDVTSQSSFDSLEIWRKNLEANADPQCVSMVAGNKCDMEGVVDEAAARAYADAHSMGFMMTSAKTAQNVDTLFEEVARRIIATMAAGSXXXXXXXXXXXXXXXXXXXXXXXXXXX QSSDCC
Sbjct:    1 MGDDPVKVVLLGNSGVGKSNLIARYHANEFSNEFMSTIGVEFVTKKIEVDGVAIRLQIWDTAGQERYASMMKTYYRKAKGALLVYDVTSQSSFDSLEIWRKNLEANADPQCVSMVAGNKCDMEGVVDEAAARAYADAHSMGFMMTSAKTAQNVDTLFEEVARRIIATMAAGSXXXXXXXXXXXXXXXXXXXXXXXXXXXKQSSDCC 206          
BLAST of jgi.p|Trimin1|64268 vs. uniprot
Match: A0A836CB79_9STRA (Ras family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB79_9STRA)

HSP 1 Score: 232 bits (592), Expect = 4.550e-74
Identity = 115/162 (70.99%), Postives = 136/162 (83.95%), Query Frame = 0
Query:    5 PVKVVLLGNSGVGKSNLIARYHANEFSNEFMSTIGVEFVTKKIEVDGVAIRLQIWDTAGQERYASMMKTYYRKAKGALLVYDVTSQSSFDSLEIWRKNLEANADPQCVSMVAGNKCDMEGVVDEAAARAYADAHSMGFMMTSAKTAQNVDTLFEEVARRIIA 166
            P+KV+LLG+SGVGKSNLIARYH++ FS EFMSTIGVEFVTKKIEVDG A+ LQIWDTAGQERYA+MMKTYYR+AKGA+LVYDVT  +SF++LE+WR  L  NA P CV++VAGNKCDME  V    A+AYA    M F +TSAKTA+NV  LFEE+ARR++A
Sbjct:   37 PMKVILLGSSGVGKSNLIARYHSDSFSTEFMSTIGVEFVTKKIEVDGQAVWLQIWDTAGQERYAAMMKTYYRRAKGAVLVYDVTDATSFEALELWRAALGTNAAPDCVAVVAGNKCDMEPAVSAQQAQAYAQGADMAFKLTSAKTAENVRELFEELARRMVA 198          
BLAST of jgi.p|Trimin1|64268 vs. uniprot
Match: A0A6H5JPX3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPX3_9PHAE)

HSP 1 Score: 219 bits (559), Expect = 1.310e-69
Identity = 110/164 (67.07%), Postives = 134/164 (81.71%), Query Frame = 0
Query:    3 DDPVKVVLLGNSGVGKSNLIARYHANEFSNEFMSTIGVEFVTKKIEVDGVAIRLQIWDTAGQERYASMMKTYYRKAKGALLVYDVTSQSSFDSLEIWRKNLEANADPQCVSMVAGNKCDM-EGVVDEAAARAYADAHSMGFMMTSAKTAQNVDTLFEEVARRII 165
            ++P+KV+LLGNSGVGKSNLIAR+H N+FS +F ST+GVEFVTK+I VDGV ++LQIWDTAGQERYASMMKTYYRKAKG+LLVYDVT++SSF  LE WRK+LEANADP+CVS+VAGNK D+ + +V      AYA    M F+ TSAKT  NV+  F  +AR I+
Sbjct:    4 EEPLKVILLGNSGVGKSNLIARFHNNDFSEDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLVYDVTNRSSFVGLEAWRKHLEANADPRCVSIVAGNKSDVSDQLVSPKDGEAYARQRGMAFISTSAKTGDNVEEAFVTLARNIL 167          
BLAST of jgi.p|Trimin1|64268 vs. uniprot
Match: D8LCK0_ECTSI (Rab11D, RAB family GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCK0_ECTSI)

HSP 1 Score: 190 bits (483), Expect = 8.060e-59
Identity = 95/140 (67.86%), Postives = 115/140 (82.14%), Query Frame = 0
Query:    3 DDPVKVVLLGNSGVGKSNLIARYHANEFSNEFMSTIGVEFVTKKIEVDGVAIRLQIWDTAGQERYASMMKTYYRKAKGALLVYDVTSQSSFDSLEIWRKNLEANADPQCVSMVAGNKCDM-EGVVDEAAARAYADAHSMG 141
            ++P+KV+LLGNSGVGKSNLIAR+H N+FS +F ST+GVEFVTK+I VDGV ++LQIWDTAGQERYASMMKTYYRKAKG+LL YD T++ SF  LE WRK+LEANADP+CVS+V GNK D+ + +V      AYA   S G
Sbjct:    4 EEPLKVILLGNSGVGKSNLIARFHNNDFSEDFESTVGVEFVTKRITVDGVPVKLQIWDTAGQERYASMMKTYYRKAKGSLLFYDFTNRFSFVGLEAWRKHLEANADPRCVSIVTGNKSDVSDQLVSPNDGEAYARQVSRG 143          
BLAST of jgi.p|Trimin1|64268 vs. uniprot
Match: A0A6V2T6F4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V2T6F4_HETAK)

HSP 1 Score: 171 bits (434), Expect = 1.770e-50
Identity = 87/164 (53.05%), Postives = 118/164 (71.95%), Query Frame = 0
Query:    7 KVVLLGNSGVGKSNLIARYHANEFSNEFMSTIGVEFVTKKIEVDGVAIRLQIWDTAGQERYASMMKTYYRKAKGALLVYDVTSQSSFDSLEIWRKNLEANADPQCVSMVAGNKCDMEG------VVDEAAARAYADAHSMGFMMTSAKTAQNVDTLFEEVARRI 164
            KVVLLGNSGVGKS +++R ++NEFS +F+STIGVEF+TK+++++G  +++QIWDTAGQERYA+MM TYYRKA+GA+L Y+     SF+S+E WR  L  NA+P    ++   K D+ G      +VD   ARAYA  H M FM TSAKT +NV+  F ++A  I
Sbjct:   12 KVVLLGNSGVGKSAVLSRLYSNEFSEDFLSTIGVEFLTKQLDINGEMVKVQIWDTAGQERYAAMMGTYYRKARGAVLCYEAVRPESFESVENWRTELMKNAEPDVKIILVATKMDLAGNVAPERLVDPQRARAYARKHGMEFMETSAKTGENVNEAFIKLAEGI 175          
BLAST of jgi.p|Trimin1|64268 vs. uniprot
Match: D2V1R1_NAEGR (Rab family small GTPase n=3 Tax=Naegleria TaxID=5761 RepID=D2V1R1_NAEGR)

HSP 1 Score: 165 bits (417), Expect = 7.340e-48
Identity = 83/168 (49.40%), Postives = 115/168 (68.45%), Query Frame = 0
Query:    7 KVVLLGNSGVGKSNLIARYHANEFSNEFMSTIGVEFVTKKIEVDGVAIRLQIWDTAGQERYASMMKTYYRKAKGALLVYDVTSQSSFDSLEIWRKNLEANADPQCVSMVAGNKCDMEGV--VDEAAARAYADAHSMGFMMTSAKTAQNVDTLFEEVARRIIATMAAGS 172
            KVV++G+SGVGKSNLI R+  N+F+ +   TIGVEF  K IE DGV I+ QIWDTAGQER+ ++   YYR A GAL+VYD+T+Q SFD+LE W K +E   +  C++++ GNKCD+  +  V+ A  RA+A+ H++ FM TSA  + NVD  F  + + I  T +  S
Sbjct:    8 KVVVIGDSGVGKSNLITRFTQNKFTKDTKPTIGVEFGAKSIEYDGVTIKGQIWDTAGQERFRAISAAYYRGANGALIVYDITNQESFDNLEKWFKEIENQGENGCINILVGNKCDLNHLRQVETATGRAFAEKHNVSFMETSALDSTNVDEAFTTLLKEIYKTQSRKS 175          
BLAST of jgi.p|Trimin1|64268 vs. uniprot
Match: M5WIX8_PRUPE (Uncharacterized protein n=10 Tax=fabids TaxID=91835 RepID=M5WIX8_PRUPE)

HSP 1 Score: 162 bits (411), Expect = 6.450e-47
Identity = 86/165 (52.12%), Postives = 113/165 (68.48%), Query Frame = 0
Query:    7 KVVLLGNSGVGKSNLIARYHANEFSNEFMSTIGVEFVTKKIEVDGVAIRLQIWDTAGQERYASMMKTYYRKAKGALLVYDVTSQSSFDSLEIWRKNLEANADPQCVSMVAGNKCDMEGVVDEAA--ARAYADAHSMGFMMTSAKTAQNVDTLFEEVARRIIATMA 169
            KVVL+G+SGVGKSNL++R+  NEFS E  STIGVEF T+ ++VDG  I+ QIWDTAGQERY ++   YYR A GALLVYDVT  S+F+S+E W K L  + DP  V M+ GNK D+  +V  +    +++A+  S+ FM TSA  A NVD  F EV  +I   ++
Sbjct:   15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLDVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRNSTFESVERWLKELRDHTDPNIVVMLVGNKSDLRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIFRVVS 179          
BLAST of jgi.p|Trimin1|64268 vs. uniprot
Match: A0A4D9AYG3_SALSN (Ras-related protein Rab-11A n=5 Tax=asterids TaxID=71274 RepID=A0A4D9AYG3_SALSN)

HSP 1 Score: 162 bits (409), Expect = 1.290e-46
Identity = 86/168 (51.19%), Postives = 114/168 (67.86%), Query Frame = 0
Query:    7 KVVLLGNSGVGKSNLIARYHANEFSNEFMSTIGVEFVTKKIEVDGVAIRLQIWDTAGQERYASMMKTYYRKAKGALLVYDVTSQSSFDSLEIWRKNLEANADPQCVSMVAGNKCDMEGVVDEAA--ARAYADAHSMGFMMTSAKTAQNVDTLFEEVARRIIATMAAGS 172
            KVVL+G+SGVGKSNL++R+  NEFS E  STIGVEF T+ + VDG  I+ QIWDTAGQERY ++   YYR A GALLVYDVT  S+F+S+E W + L  + DP  V M+ GNKCD+  +V  +     ++A+  S+ FM TSA  A NV+  F EV  +I  +++  S
Sbjct:   15 KVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLTVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFESVERWLRELRDHTDPNVVVMLIGNKCDLRHLVAVSTDDGTSFAETESLYFMETSALDATNVENAFTEVLTQIYRSVSKKS 182          
BLAST of jgi.p|Trimin1|64268 vs. uniprot
Match: A0A022QJI8_ERYGU (Uncharacterized protein n=1 Tax=Erythranthe guttata TaxID=4155 RepID=A0A022QJI8_ERYGU)

HSP 1 Score: 162 bits (409), Expect = 1.290e-46
Identity = 85/160 (53.12%), Postives = 112/160 (70.00%), Query Frame = 0
Query:    7 KVVLLGNSGVGKSNLIARYHANEFSNEFMSTIGVEFVTKKIEVDGVAIRLQIWDTAGQERYASMMKTYYRKAKGALLVYDVTSQSSFDSLEIWRKNLEANADPQCVSMVAGNKCDMEGVVDEAA--ARAYADAHSMGFMMTSAKTAQNVDTLFEEVARRI 164
            KVVL+G+SGVGKSNL++R+  NEFS E  STIGVEF T+ + VDG  I+ QIWDTAGQERY ++   YYR A GALLVYDVT  S+F+S+E W + L  + DP  V M+ GNKCD+  +V  ++    ++A+  S+ FM TSA  + NVD+ F EV  +I
Sbjct:   15 KVVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSLTVDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRHSTFESVERWLRELRDHTDPNIVVMLIGNKCDLRHLVAVSSDGGASFAERESLYFMETSALDSTNVDSAFTEVLTQI 174          
BLAST of jgi.p|Trimin1|64268 vs. uniprot
Match: A0A833QRZ1_9POAL (Ras-related protein RIC2-like protein n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QRZ1_9POAL)

HSP 1 Score: 161 bits (408), Expect = 1.830e-46
Identity = 86/167 (51.50%), Postives = 116/167 (69.46%), Query Frame = 0
Query:    7 KVVLLGNSGVGKSNLIARYHANEFSNEFMSTIGVEFVTKKIEVDGVAIRLQIWDTAGQERYASMMKTYYRKAKGALLVYDVTSQSSFDSLEIWRKNLEANADPQCVSMVAGNKCDMEGVV----DEAAARAYADAHSMGFMMTSAKTAQNVDTLFEEVARRIIATMA 169
            KVVL+G+SGVGKSNL++R+  NEFS E  STIGVEF T+ + +DG  I+ QIWDTAGQERY ++   YYR A GALLVYDVT + +FD++E W + L  + DP  V M+ GNK D+  +V    D+ +A  +A+  ++ FM TSA  A+NVD+ F EV  +I  TM+
Sbjct:   16 KVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNIDGKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDVTRRQTFDNVERWLRELRDHTDPSIVVMLLGNKSDLRHLVAVPTDDGSA--FAEKEALYFMETSALEAKNVDSSFAEVLTQIYRTMS 180          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|64268 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YTJ1_9STRA1.210e-11699.51GTPase Ypt3 n=1 Tax=Tribonema minus TaxID=303371 R... [more]
A0A836CB79_9STRA4.550e-7470.99Ras family-domain-containing protein n=1 Tax=Tribo... [more]
A0A6H5JPX3_9PHAE1.310e-6967.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D8LCK0_ECTSI8.060e-5967.86Rab11D, RAB family GTPase n=1 Tax=Ectocarpus silic... [more]
A0A6V2T6F4_HETAK1.770e-5053.05Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
D2V1R1_NAEGR7.340e-4849.40Rab family small GTPase n=3 Tax=Naegleria TaxID=57... [more]
M5WIX8_PRUPE6.450e-4752.12Uncharacterized protein n=10 Tax=fabids TaxID=9183... [more]
A0A4D9AYG3_SALSN1.290e-4651.19Ras-related protein Rab-11A n=5 Tax=asterids TaxID... [more]
A0A022QJI8_ERYGU1.290e-4653.13Uncharacterized protein n=1 Tax=Erythranthe guttat... [more]
A0A833QRZ1_9POAL1.830e-4651.50Ras-related protein RIC2-like protein n=1 Tax=Care... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR00449RASTRNSFRMNGcoord: 29..45
score: 35.01
coord: 142..164
score: 40.5
coord: 6..27
score: 43.68
coord: 109..122
score: 35.25
coord: 47..69
score: 52.75
NoneNo IPR availableSMARTSM00175rab_sub_5coord: 6..167
e-value: 5.6E-77
score: 271.7
NoneNo IPR availableSMARTSM00173ras_sub_4coord: 7..167
e-value: 3.2E-25
score: 99.8
NoneNo IPR availableSMARTSM00176ran_sub_2coord: 11..206
e-value: 5.7E-5
score: 21.5
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 177..206
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 190..206
NoneNo IPR availablePANTHERPTHR47977LD21953P-RELATEDcoord: 6..206
NoneNo IPR availablePANTHERPTHR47977:SF51RAS AND EF-HAND DOMAIN-CONTAINING PROTEINcoord: 6..206
NoneNo IPR availablePROSITEPS51419RABcoord: 1..206
score: 30.209379
NoneNo IPR availableCDDcd00154Rabcoord: 6..162
e-value: 1.14132E-73
score: 217.709
IPR001806Small GTPaseSMARTSM00174rho_sub_3coord: 8..167
e-value: 7.8E-9
score: -5.6
IPR001806Small GTPasePFAMPF00071Rascoord: 7..165
e-value: 9.8E-54
score: 181.3
IPR001806Small GTPasePROSITEPS51421RAScoord: 1..206
score: 15.250022
IPR027417P-loop containing nucleoside triphosphate hydrolaseGENE3D3.40.50.300coord: 2..176
e-value: 2.2E-59
score: 202.2
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..168
IPR005225Small GTP-binding protein domainTIGRFAMTIGR00231TIGR00231coord: 5..160
e-value: 9.8E-32
score: 108.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:1188504..1192582 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|64268mRNA_1664Tribonema minus UTEX_B_3156 mRNAContig_4 1188384..1193287 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|64268|CE64267_179 ID=Trimin1|64268|CE64267_179|Name=jgi.p|Trimin1|64268|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=207bp
MGDDPVKVVLLGNSGVGKSNLIARYHANEFSNEFMSTIGVEFVTKKIEVD
GVAIRLQIWDTAGQERYASMMKTYYRKAKGALLVYDVTSQSSFDSLEIWR
KNLEANADPQCVSMVAGNKCDMEGVVDEAAARAYADAHSMGFMMTSAKTA
QNVDTLFEEVARRIIATMAAGSGAAAPRPAAGGGMKLSAPPNGGSSSGSK
QSSDCC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001806Small_GTPase
IPR027417P-loop_NTPase
IPR005225Small_GTP-bd_dom