Trimin1|64144|CE64143_25 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|64144
Unique NameTrimin1|64144|CE64143_25
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length107
Homology
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BLAST of jgi.p|Trimin1|64144 vs. uniprot
Match: A0A836CCG9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCG9_9STRA)

HSP 1 Score: 221 bits (564), Expect = 2.190e-73
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0 
Query:    1 MCSLPACSQCCCLLSGMGIVFLTILGILFEEQPFFTNPEVYHKDGSEEAAEAVYWGAFIYFITLLMSLYGMWYSKRRSAQYNEAQFDHELAPLAASPPRPDYGGSR 106
            MCSLPACSQCCCLLSGMGIVFLTILGILFEEQPFFTNPEVYHKDGSEEAAEAVYWGAFIYFITLLMSLYGMWYSKRRSAQYNEAQFDHELAPLAASPPRPDYGGSR
Sbjct:    1 MCSLPACSQCCCLLSGMGIVFLTILGILFEEQPFFTNPEVYHKDGSEEAAEAVYWGAFIYFITLLMSLYGMWYSKRRSAQYNEAQFDHELAPLAASPPRPDYGGSR 106
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BLAST of jgi.p|Trimin1|64144 vs. uniprot
Match: D8LG89_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LG89_ECTSI)

HSP 1 Score: 52.0 bits (123), Expect = 3.490e-6
Identity = 29/74 (39.19%), Postives = 45/74 (60.81%), Query Frame = 0 
Query:    4 LPACSQCCCLLSGMGIVFLTILGILFEEQPFFTNPEVYHKDGSEEAAEAVYWGAFIYFITLLMSLYGMWYSKRR 77
            +  C++ C  LS  GI+FL I+GI+F++Q F+T+ EV   D    AA   Y+ A +Y + + +SL G+ Y K R
Sbjct:    4 IDCCARVCIGLSIPGIIFLIIIGIMFDKQGFYTSVEV---DDPTAAASECYFAALLYVVAIGVSLGGICYDKNR 74
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|64144 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A836CCG9_9STRA2.190e-73100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D8LG89_ECTSI3.490e-639.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_4contigContig_4:1041028..1042877 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|64144mRNA_1643Tribonema minus UTEX_B_3156 mRNAContig_4 1040937..1042956 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|64144|CE64143_25 ID=Trimin1|64144|CE64143_25|Name=jgi.p|Trimin1|64144|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=107bp
MCSLPACSQCCCLLSGMGIVFLTILGILFEEQPFFTNPEVYHKDGSEEAA
EAVYWGAFIYFITLLMSLYGMWYSKRRSAQYNEAQFDHELAPLAASPPRP
DYGGSR*
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