Trimin1|63996|CE63995_197 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|63996
Unique Name	Trimin1\|63996\|CE63995_197
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	90

Homology

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BLAST of jgi.p|Trimin1|63996 vs. uniprot
Match: A0A835YTS3_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTS3_9STRA)

HSP 1 Score: 179 bits (455), Expect = 2.720e-57
Identity = 89/89 (100.00%), Postives = 89/89 (100.00%), Query Frame = 0

Query:    1 MAERKAVIKSADMSEDMQQDAVDCASQALEKFNIEKDIAAFIKKEFDRKFSPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            MAERKAVIKSADMSEDMQQDAVDCASQALEKFNIEKDIAAFIKKEFDRKFSPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MAERKAVIKSADMSEDMQQDAVDCASQALEKFNIEKDIAAFIKKEFDRKFSPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of jgi.p|Trimin1|63996 vs. uniprot
Match: A0A2C9K100_BIOGL (Dynein light chain n=4 Tax=Euthyneura TaxID=216307 RepID=A0A2C9K100_BIOGL)

HSP 1 Score: 171 bits (434), Expect = 4.350e-54
Identity = 82/89 (92.13%), Postives = 89/89 (100.00%), Query Frame = 0

Query:    1 MAERKAVIKSADMSEDMQQDAVDCASQALEKFNIEKDIAAFIKKEFDRKFSPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            M+ERKAVIK+ADMSEDMQQDAVDCA+QALEK+NIEKDIAAFIKKEFD+K++PTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSERKAVIKNADMSEDMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

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BLAST of jgi.p|Trimin1|63996 vs. uniprot
Match: M4BH12_HYAAE (Dynein light chain n=5 Tax=Eukaryota TaxID=2759 RepID=M4BH12_HYAAE)

HSP 1 Score: 171 bits (434), Expect = 4.350e-54
Identity = 82/89 (92.13%), Postives = 88/89 (98.88%), Query Frame = 0

Query:    1 MAERKAVIKSADMSEDMQQDAVDCASQALEKFNIEKDIAAFIKKEFDRKFSPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            MAERKAVIK+ADM EDMQQDAVDCASQALEK+NIEKDIAAFIKKEFD+K++PTWHCIVGRNFGSYVTHETKHFIYFYLGQVA+LLFKSG
Sbjct:    1 MAERKAVIKNADMHEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89

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BLAST of jgi.p|Trimin1|63996 vs. uniprot
Match: C1FDC9_MICCC (Dynein light chain n=2 Tax=Eukaryota TaxID=2759 RepID=C1FDC9_MICCC)

HSP 1 Score: 171 bits (433), Expect = 6.190e-54
Identity = 81/89 (91.01%), Postives = 89/89 (100.00%), Query Frame = 0

Query:    1 MAERKAVIKSADMSEDMQQDAVDCASQALEKFNIEKDIAAFIKKEFDRKFSPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            M+ERKAVIK+ADMSEDMQQDAVDCA+QALEK+NIEKDIAAFIKKEFD+K++PTWHCIVGRNFGSYVTHETKHFIYFYLGQVA+LLFKSG
Sbjct:    1 MSERKAVIKNADMSEDMQQDAVDCATQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89

[Close]

BLAST of jgi.p|Trimin1|63996 vs. uniprot
Match: Q6DEU5_XENTR (Dynein light chain n=10 Tax=Opisthokonta TaxID=33154 RepID=Q6DEU5_XENTR)

HSP 1 Score: 171 bits (433), Expect = 6.190e-54
Identity = 82/89 (92.13%), Postives = 89/89 (100.00%), Query Frame = 0

Query:    1 MAERKAVIKSADMSEDMQQDAVDCASQALEKFNIEKDIAAFIKKEFDRKFSPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            M+ERKAVIK+ADMSE+MQQDAVDCA+QALEKFNIEKDIAAFIKKEFD+K++PTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSERKAVIKNADMSEEMQQDAVDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of jgi.p|Trimin1|63996 vs. uniprot
Match: W4HCB9_9STRA (Dynein light chain n=26 Tax=Oomycota TaxID=4762 RepID=W4HCB9_9STRA)

HSP 1 Score: 171 bits (432), Expect = 8.790e-54
Identity = 82/89 (92.13%), Postives = 88/89 (98.88%), Query Frame = 0

Query:    1 MAERKAVIKSADMSEDMQQDAVDCASQALEKFNIEKDIAAFIKKEFDRKFSPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            M+ERKAVIK+ADM EDMQQDAVDCASQALEK+NIEKDIAAFIKKEFD+K++PTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MSERKAVIKNADMHEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of jgi.p|Trimin1|63996 vs. uniprot
Match: A0A0E9X984_ANGAN (Dynein light chain n=2 Tax=Anguilla anguilla TaxID=7936 RepID=A0A0E9X984_ANGAN)

HSP 1 Score: 171 bits (432), Expect = 8.790e-54
Identity = 81/89 (91.01%), Postives = 89/89 (100.00%), Query Frame = 0

Query:    1 MAERKAVIKSADMSEDMQQDAVDCASQALEKFNIEKDIAAFIKKEFDRKFSPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            MA+RKAVIK+ADMSEDMQQDAVDCA+QA+EKFNIEKDIAA+IKKEFD+K++PTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MADRKAVIKNADMSEDMQQDAVDCATQAMEKFNIEKDIAAYIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

[Close]

BLAST of jgi.p|Trimin1|63996 vs. uniprot
Match: A0A2G8KQE3_STIJA (Dynein light chain n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8KQE3_STIJA)

HSP 1 Score: 170 bits (431), Expect = 1.250e-53
Identity = 80/89 (89.89%), Postives = 88/89 (98.88%), Query Frame = 0

Query:    1 MAERKAVIKSADMSEDMQQDAVDCASQALEKFNIEKDIAAFIKKEFDRKFSPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            M ERKAV+K+ADM+EDMQQ+A+DCASQA+EKFNIEKDIAAFIKKEFD+K+SPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:    1 MTERKAVVKNADMAEDMQQEAIDCASQAMEKFNIEKDIAAFIKKEFDKKYSPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89

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BLAST of jgi.p|Trimin1|63996 vs. uniprot
Match: D7FVR3_ECTSI (Dynein light chain n=2 Tax=Stramenopiles TaxID=33634 RepID=D7FVR3_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 1.250e-53
Identity = 82/89 (92.13%), Postives = 88/89 (98.88%), Query Frame = 0

Query:    1 MAERKAVIKSADMSEDMQQDAVDCASQALEKFNIEKDIAAFIKKEFDRKFSPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            M+ERKAVIK+ADMSEDMQQDAVDCASQALEK+NIEKDIAAFIKKEFD+K+S TWHCIVGRNFGSYVTHETKHFIYFYLGQVA+LLFKSG
Sbjct:    1 MSERKAVIKNADMSEDMQQDAVDCASQALEKYNIEKDIAAFIKKEFDKKYSATWHCIVGRNFGSYVTHETKHFIYFYLGQVAVLLFKSG 89

[Close]

BLAST of jgi.p|Trimin1|63996 vs. uniprot
Match: A0A7S0LMM9_9EUKA (Dynein light chain n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0LMM9_9EUKA)

HSP 1 Score: 171 bits (433), Expect = 1.580e-53
Identity = 81/89 (91.01%), Postives = 89/89 (100.00%), Query Frame = 0

Query:    1 MAERKAVIKSADMSEDMQQDAVDCASQALEKFNIEKDIAAFIKKEFDRKFSPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 89
            MA+RKAVIK+ADMSED+QQDA+DCA+QALEKFNIEKDIAAFIKKEFD+K++PTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG
Sbjct:   31 MADRKAVIKNADMSEDLQQDAIDCATQALEKFNIEKDIAAFIKKEFDKKYNPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG 119

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|63996 vs. uniprot

BLAST of jgi.p|Trimin1|63996 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A835YTS3_9STRA	2.720e-57	100.00	Dynein light chain n=1 Tax=Tribonema minus TaxID=3...	[more]
A0A2C9K100_BIOGL	4.350e-54	92.13	Dynein light chain n=4 Tax=Euthyneura TaxID=216307...	[more]
M4BH12_HYAAE	4.350e-54	92.13	Dynein light chain n=5 Tax=Eukaryota TaxID=2759 Re...	[more]
C1FDC9_MICCC	6.190e-54	91.01	Dynein light chain n=2 Tax=Eukaryota TaxID=2759 Re...	[more]
Q6DEU5_XENTR	6.190e-54	92.13	Dynein light chain n=10 Tax=Opisthokonta TaxID=331...	[more]
W4HCB9_9STRA	8.790e-54	92.13	Dynein light chain n=26 Tax=Oomycota TaxID=4762 Re...	[more]
A0A0E9X984_ANGAN	8.790e-54	91.01	Dynein light chain n=2 Tax=Anguilla anguilla TaxID...	[more]
A0A2G8KQE3_STIJA	1.250e-53	89.89	Dynein light chain n=1 Tax=Stichopus japonicus Tax...	[more]
D7FVR3_ECTSI	1.250e-53	92.13	Dynein light chain n=2 Tax=Stramenopiles TaxID=336...	[more]
A0A7S0LMM9_9EUKA	1.580e-53	91.01	Dynein light chain n=1 Tax=Coccolithus braarudii T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 1..88 e-value: 9.8E-61 score: 217.8
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 5..88 e-value: 1.1E-41 score: 141.1
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..89
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 1..89 e-value: 8.9E-46 score: 156.1
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 2..89
None	No IPR available	PANTHER	PTHR11886:SF62	DYNEIN LIGHT CHAIN	coord: 1..89
IPR019763	Dynein light chain, type 1/2, conserved site	PROSITE	PS01239	DYNEIN_LIGHT_1	coord: 55..69

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_4	contig	Contig_4:791470..794292 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|63996	mRNA_1618	Tribonema minus UTEX_B_3156	mRNA	Contig_4 791310..794519 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|63996|CE63995_197 ID=Trimin1|63996|CE63995_197|Name=jgi.p|Trimin1|63996|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=90bp
MAERKAVIKSADMSEDMQQDAVDCASQALEKFNIEKDIAAFIKKEFDRKF
SPTWHCIVGRNFGSYVTHETKHFIYFYLGQVAILLFKSG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001372	Dynein_light_chain_typ-1/2
IPR037177	DLC_sf
IPR019763	Dynein_light_1/2_CS