Trimin1|51915|CE51914_39 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|51915
Unique Name	Trimin1\|51915\|CE51914_39
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	223

Homology

[Close]

BLAST of jgi.p|Trimin1|51915 vs. uniprot
Match: A0A836CFX4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFX4_9STRA)

HSP 1 Score: 197 bits (500), Expect = 4.580e-60
Identity = 222/222 (100.00%), Postives = 222/222 (100.00%), Query Frame = 0

Query:    1 CWCGDWAAAAAAGVCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAAAAGSEKLLVPSATEAKSVDVQLLLCVLLSMAGSDSASRDCEPSSPPAVVAFASFGTSVPVIAAAPASAAXXXXXXXXXXXXXXXXXXXXXXXXDGSSVRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLADLASVVKTLLNHSLNISREAQARLLRSRLG 222
            CWCGDWAAAAAAGVCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAAAAGSEKLLVPSATEAKSVDVQLLLCVLLSMAGSDSASRDCEPSSPPAVVAFASFGTSVPVIAAAPASAAXXXXXXXXXXXXXXXXXXXXXXXXDGSSVRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLADLASVVKTLLNHSLNISREAQARLLRSRLG
Sbjct:    1 CWCGDWAAAAAAGVCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDDAAAAGSEKLLVPSATEAKSVDVQLLLCVLLSMAGSDSASRDCEPSSPPAVVAFASFGTSVPVIAAAPASAAXXXXXXXXXXXXXXXXXXXXXXXXDGSSVRSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLLADLASVVKTLLNHSLNISREAQARLLRSRLG 222

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|51915 vs. uniprot

BLAST of jgi.p|Trimin1|51915 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CFX4_9STRA	4.580e-60	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_27	contig	Contig_27:795245..795913 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|51915	mRNA_6965	Tribonema minus UTEX_B_3156	mRNA	Contig_27 795041..795913 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|51915|CE51914_39 ID=Trimin1|51915|CE51914_39|Name=jgi.p|Trimin1|51915|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=223bp
CWCGDWAAAAAAGVCAAGGCCAEASAGDADAAVGSLAAASALASADDAAA
AGSEKLLVPSATEAKSVDVQLLLCVLLSMAGSDSASRDCEPSSPPAVVAF
ASFGTSVPVIAAAPASAAAAASLASCAAATAFATAAAADSSGDGSSVRSD
GASVAKPPSTATATSDAAIAVSGASAAPEVAAAAAPASALLADLASVVKT
LLNHSLNISREAQARLLRSRLG*