Trimin1|50557|CE50556_16 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|50557
Unique Name	Trimin1\|50557\|CE50556_16
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	97

Homology

[Close]

BLAST of jgi.p|Trimin1|50557 vs. uniprot
Match: A0A836CG93_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG93_9STRA)

HSP 1 Score: 193 bits (491), Expect = 1.450e-62
Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0

Query:    1 MLKLHPWNISAHAPFLIIVLLMVLVSCLLSMHSVLCLSSPCNLLPGHDVYHVQGMDWRQTCTALAQLSTEQQPAKDAASTQHAWHGSAPNSYSDSQ 96
            MLKLHPWNISAHAPFLIIVLLMVLVSCLLSMHSVLCLSSPCNLLPGHDVYHVQGMDWRQTCTALAQLSTEQQPAKDAASTQHAWHGSAPNSYSDSQ
Sbjct:    1 MLKLHPWNISAHAPFLIIVLLMVLVSCLLSMHSVLCLSSPCNLLPGHDVYHVQGMDWRQTCTALAQLSTEQQPAKDAASTQHAWHGSAPNSYSDSQ 96

[Close]

BLAST of jgi.p|Trimin1|50557 vs. uniprot
Match: A0A836CNH9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CNH9_9STRA)

HSP 1 Score: 111 bits (277), Expect = 4.000e-30
Identity = 54/59 (91.53%), Postives = 56/59 (94.92%), Query Frame = 0

Query:   22 MVLVSCLLSMHSVLCLSSPCNLLPGHDVYHVQGMDWRQTCTALAQLSTEQQPAKDAAST 80
            MVLVSCLLSMH VLCLSSPCNLLPGHDVYHVQGMDWRQTC+ALAQLSTEQQPAKD  S+
Sbjct:    1 MVLVSCLLSMHCVLCLSSPCNLLPGHDVYHVQGMDWRQTCSALAQLSTEQQPAKDGKSS 59

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|50557 vs. uniprot

BLAST of jgi.p|Trimin1|50557 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A836CG93_9STRA	1.450e-62	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CNH9_9STRA	4.000e-30	91.53	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 72..96
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..27 score: 5.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_26	contig	Contig_26:722834..725805 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|50557	mRNA_1989	Tribonema minus UTEX_B_3156	mRNA	Contig_26 722745..725949 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|50557|CE50556_16 ID=Trimin1|50557|CE50556_16|Name=jgi.p|Trimin1|50557|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=97bp
MLKLHPWNISAHAPFLIIVLLMVLVSCLLSMHSVLCLSSPCNLLPGHDVY
HVQGMDWRQTCTALAQLSTEQQPAKDAASTQHAWHGSAPNSYSDSQ*