Trimin1|50374|CE50373_46 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|50374
Unique NameTrimin1|50374|CE50373_46
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length163
Homology
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BLAST of jgi.p|Trimin1|50374 vs. uniprot
Match: A0A836CIK0_9STRA (Ankyrin repeat-containing domain protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIK0_9STRA)

HSP 1 Score: 324 bits (830), Expect = 3.850e-112
Identity = 158/162 (97.53%), Postives = 160/162 (98.77%), Query Frame = 0 
Query:    1 MVEAVSGSEHQRVNDLWQAQSLAGHGFDVNNVFAQSFKNTSLLHIAAAGRSHEVVERLLSHGAAVNCLNGAGQSPLHCAATPDIARILVRCGADVNLMNPVIGWTAVSYAMEKAMVSQEWREWTIELLAEHDADVEAAVQMLELWSFLYDEEFLQELHKYID 162
            M EAVSGSEHQRVNDLWQAQSLAGHGFDVNNVFAQSFKNTSLLHIAA GRSHEVVERLLSHGAAVNCLNGAGQSPLHCAATPDIARILVRCGADVNL+NPVIGWTAVSYAMEKAMVSQEWREWT+ELLAEHDADVEAAVQMLELWSFLYDEEFLQELHKYID
Sbjct:    1 MAEAVSGSEHQRVNDLWQAQSLAGHGFDVNNVFAQSFKNTSLLHIAATGRSHEVVERLLSHGAAVNCLNGAGQSPLHCAATPDIARILVRCGADVNLINPVIGWTAVSYAMEKAMVSQEWREWTVELLAEHDADVEAAVQMLELWSFLYDEEFLQELHKYID 162
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BLAST of jgi.p|Trimin1|50374 vs. uniprot
Match: A0A2W1BFY5_HELAM (SOCS box domain-containing protein n=3 Tax=Heliothinae TaxID=95178 RepID=A0A2W1BFY5_HELAM)

HSP 1 Score: 58.5 bits (140), Expect = 5.330e-7
Identity = 36/99 (36.36%), Postives = 55/99 (55.56%), Query Frame = 0 
Query:   42 LLHIAAAGRSHEVVERLLSHGAAVNCLNGAGQSPLHCAAT---PDIARILVRCGADVNLMNPVIGWTAVSYAMEKAMVSQEWREWTIELLAEHDADVEA 137
            LLH A   R  E+VE L ++GA +N  N  G +PL  AA    P++A+IL+R GA+ NL N + G   +  A+E      E+ E  ++ + +H  D+ A
Sbjct:  387 LLHNAIIQRQVEIVELLTAYGAGINLYNDNGDTPLLLAARLSQPEVAKILLRKGANANLCNSITGANVLHIAVESMANPDEFEE-LLQCVIDHKIDMNA 484
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BLAST of jgi.p|Trimin1|50374 vs. uniprot
Match: A0A8H6D1I8_9HYPO (Multiple ankyrin repeats single kh domain-containing protein n=1 Tax=Fusarium globosum TaxID=78864 RepID=A0A8H6D1I8_9HYPO)

HSP 1 Score: 53.9 bits (128), Expect = 2.330e-5
Identity = 31/76 (40.79%), Postives = 47/76 (61.84%), Query Frame = 0 
Query:   43 LHIAAAGRSHEVVERLLSHGAAVNCLNGAGQSPLHCAATPDIARILVRCGADVNLMNPVIGWTAVSYAMEKAMVSQ 118
            LH AA   + ++VERLLSHG AV+ +  A  +PLH A++ D+ R+L+  GA+VN  N   G T +  A ++  V +
Sbjct: 1238 LHYAAKNGNVDLVERLLSHGHAVDPVGFAKCTPLHIASSTDVKRVLLAAGANVNAFNRE-GLTPLHTAAQRGAVEE 1312
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|50374 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A836CIK0_9STRA3.850e-11297.53Ankyrin repeat-containing domain protein n=2 Tax=T... [more]
A0A2W1BFY5_HELAM5.330e-736.36SOCS box domain-containing protein n=3 Tax=Helioth... [more]
A0A8H6D1I8_9HYPO2.330e-540.79Multiple ankyrin repeats single kh domain-containi... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 71..97
e-value: 1.6
score: 17.8
coord: 38..67
e-value: 0.036
score: 23.2
IPR002110Ankyrin repeatPFAMPF12796Ank_2coord: 20..98
e-value: 3.0E-10
score: 40.5
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 38..70
score: 10.12526
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 7..149
e-value: 4.3E-23
score: 83.8
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 14..137
NoneNo IPR availablePANTHERPTHR24126ANKYRIN REPEAT, PH AND SEC7 DOMAIN CONTAINING PROTEIN SECG-RELATEDcoord: 21..137
NoneNo IPR availablePROSITEPS50297ANK_REP_REGIONcoord: 38..66
score: 9.303788

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_26contigContig_26:158050..158538 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|50374mRNA_1811Tribonema minus UTEX_B_3156 mRNAContig_26 157977..158699 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|50374|CE50373_46 ID=Trimin1|50374|CE50373_46|Name=jgi.p|Trimin1|50374|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=163bp
MVEAVSGSEHQRVNDLWQAQSLAGHGFDVNNVFAQSFKNTSLLHIAAAGR
SHEVVERLLSHGAAVNCLNGAGQSPLHCAATPDIARILVRCGADVNLMNP
VIGWTAVSYAMEKAMVSQEWREWTIELLAEHDADVEAAVQMLELWSFLYD
EEFLQELHKYID*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf