Trimin1|5017|CE5016_276 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|5017
Unique Name	Trimin1\|5017\|CE5016_276
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	146

Homology

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BLAST of jgi.p|Trimin1|5017 vs. uniprot
Match: A0A836CMQ4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMQ4_9STRA)

HSP 1 Score: 231 bits (590), Expect = 4.220e-76
Identity = 145/145 (100.00%), Postives = 145/145 (100.00%), Query Frame = 0

Query:    1 MAQGTFKSTGLKGKAGKPQIKKGGKHVAATKASAGLGRXXXXXXXXXXXXNVAPRKPDALQAYKKEKEVTKQIHKQLITQTAAKAISNQEKMELGDIRGSGKALVKEMRRDALTRKKSRIEEKLLAAKEKLDKLDQREETKKPSK 145
            MAQGTFKSTGLKGKAGKPQIKKGGKHVAATKASAGLGRXXXXXXXXXXXXNVAPRKPDALQAYKKEKEVTKQIHKQLITQTAAKAISNQEKMELGDIRGSGKALVKEMRRDALTRKKSRIEEKLLAAKEKLDKLDQREETKKPSK
Sbjct:    1 MAQGTFKSTGLKGKAGKPQIKKGGKHVAATKASAGLGRXXXXXXXXXXXXNVAPRKPDALQAYKKEKEVTKQIHKQLITQTAAKAISNQEKMELGDIRGSGKALVKEMRRDALTRKKSRIEEKLLAAKEKLDKLDQREETKKPSK 145

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BLAST of jgi.p|Trimin1|5017 vs. uniprot
Match: A0A7S1TQR0_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TQR0_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 5.000e-6
Identity = 29/54 (53.70%), Postives = 42/54 (77.78%), Query Frame = 0

Query:   82 AAKAISNQEKMELGDIRGSGKALVKEMRRDALTRKKSRIEEKLLAAKEKLDKLD 135
            AAKAI N E++   D++ +G+AL KE+RR ALT+KK+RIEEK+  AKE+L  ++
Sbjct:   68 AAKAIQNGERIVRTDVKNAGRALAKEIRRQALTKKKTRIEEKIEKAKERLHNIE 121

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BLAST of jgi.p|Trimin1|5017 vs. uniprot
Match: A0A7S2WKX0_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WKX0_9STRA)

HSP 1 Score: 53.1 bits (126), Expect = 5.080e-6
Identity = 44/135 (32.59%), Postives = 68/135 (50.37%), Query Frame = 0

Query:    1 MAQGTFKSTGLKGKAGKPQIKKGGKHVAATKASAGLGRXXXXXXXXXXXXNVAPRKPDALQAYKKEKEVTKQIHKQLITQTAAKAISNQEKMELGDIRGSGKALVKEMRRDALTRKKSRIEEKLLAAKEKLDKLD 135
            MAQG  K    +GKA    ++K  K     K  AG+ +               P+    L+ +K+ + VT+QI+  +   TAAK     E+++  DI   GK + ++++R+AL RKK R+EEKL   + KLD  D
Sbjct:    1 MAQGQLKG---RGKAKSVSLRKQAKAAQPKKHRAGVAK---------------PKNQARLERFKQRQTVTRQINANIEQLTAAKVCQAGERLKTRDIAAKGKEMARDIKREALKRKKPRVEEKLEKLRAKLDHQD 117

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BLAST of jgi.p|Trimin1|5017 vs. uniprot
Match: A0A7R9UB02_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UB02_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 5.200e-6
Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 0

Query:   82 AAKAISNQEKMELGDIRGSGKALVKEMRRDALTRKKSRIEEKLLAAKEKL 131
            AAKA+ N E++   D++  GK L KE+RR ALTRKKSRIEEKL  AK+KL
Sbjct:   72 AAKAVQNGERLLRPDMKSKGKELAKEIRRQALTRKKSRIEEKLEQAKQKL 121

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|5017 vs. uniprot

BLAST of jgi.p|Trimin1|5017 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4


Match Name	E-value	Identity	Description
A0A836CMQ4_9STRA	4.220e-76	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A7S1TQR0_9STRA	5.000e-6	53.70	Hypothetical protein n=1 Tax=Phaeomonas parva TaxI...	[more]
A0A7S2WKX0_9STRA	5.080e-6	32.59	Hypothetical protein n=1 Tax=Rhizochromulina marin...	[more]
A0A7R9UB02_9STRA	5.200e-6	62.00	Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 110..137
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 125..145
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..40

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_105	contig	Contig_105:2353..4922 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|5017	mRNA_12706	Tribonema minus UTEX_B_3156	mRNA	Contig_105 2317..4975 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|5017|CE5016_276 ID=Trimin1|5017|CE5016_276|Name=jgi.p|Trimin1|5017|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=146bp
MAQGTFKSTGLKGKAGKPQIKKGGKHVAATKASAGLGRVGGKAGMKKGKF
NVAPRKPDALQAYKKEKEVTKQIHKQLITQTAAKAISNQEKMELGDIRGS
GKALVKEMRRDALTRKKSRIEEKLLAAKEKLDKLDQREETKKPSK*