Trimin1|48437|CE48436_38 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|48437
Unique Name	Trimin1\|48437\|CE48436_38
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	148

Homology

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BLAST of jgi.p|Trimin1|48437 vs. uniprot
Match: A0A835Z167_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z167_9STRA)

HSP 1 Score: 173 bits (439), Expect = 4.770e-53
Identity = 147/147 (100.00%), Postives = 147/147 (100.00%), Query Frame = 0

Query:    1 MPPKSQTPTAPPAAAPATPAGSSCDGVEAELSKVAQAITXXXXXXXXXXXXXXXXXKVLQEEGKQNPEQPVYLSMNVQELKEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDRQAMPSPDVPGVMSNDCRVHAVESWPRGVE 147
            MPPKSQTPTAPPAAAPATPAGSSCDGVEAELSKVAQAITXXXXXXXXXXXXXXXXXKVLQEEGKQNPEQPVYLSMNVQELKEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDRQAMPSPDVPGVMSNDCRVHAVESWPRGVE
Sbjct:    1 MPPKSQTPTAPPAAAPATPAGSSCDGVEAELSKVAQAITXXXXXXXXXXXXXXXXXKVLQEEGKQNPEQPVYLSMNVQELKEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDRQAMPSPDVPGVMSNDCRVHAVESWPRGVE 147

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BLAST of jgi.p|Trimin1|48437 vs. uniprot
Match: A0A835ZAP0_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAP0_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.450e-31
Identity = 104/128 (81.25%), Postives = 105/128 (82.03%), Query Frame = 0

Query:    1 MPPKSQTPTAPPAAAPATPAGSSCDGVEAELSKVAQAITXXXXXXXXXXXXXXXXXKVLQEEGKQNPEQPVYLSMNVQELKEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDRQAMPSPDVPG 128
            MPPKSQTPTAPPAAAPATPAGSS DGVEAELS VAQAI                  KVLQEEGK+NPEQPVYLSMNVQELKEHL  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX DRQAMPSPDVPG
Sbjct:    1 MPPKSQTPTAPPAAAPATPAGSSYDGVEAELSIVAQAIIKVEGQIDAVEIKVNDVEKVLQEEGKRNPEQPVYLSMNVQELKEHLKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRQAMPSPDVPG 128

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BLAST of jgi.p|Trimin1|48437 vs. uniprot
Match: A0A835ZJ20_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJ20_9STRA)

HSP 1 Score: 117 bits (292), Expect = 3.460e-28
Identity = 110/127 (86.61%), Postives = 110/127 (86.61%), Query Frame = 0

Query:    1 MPPKSQTPTAPPAAAPATPAGSSCDGVEAELSKVAQAITXXXXXXXXXXXXXXXXXKVLQEEGKQNPEQPVYLSMNVQELKEHLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDRQAMPSPDVP 127
            MPPKSQTPTAPPAAAPATPAGSS DGVEAELSKVAQAIT     XXXXXXXXX   KVLQEEGKQNPEQPVYLSMNVQELKEH XXXXXXXXXXXXXXXXXXXXXXXXX       DRQAMPSPDVP
Sbjct:    1 MPPKSQTPTAPPAAAPATPAGSSYDGVEAELSKVAQAITKVEGQXXXXXXXXXDVEKVLQEEGKQNPEQPVYLSMNVQELKEHXXXXXXXXXXXXXXXXXXXXXXXXXX-------DRQAMPSPDVP 120

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|48437 vs. uniprot

BLAST of jgi.p|Trimin1|48437 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835Z167_9STRA	4.770e-53	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835ZAP0_9STRA	2.450e-31	81.25	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835ZJ20_9STRA	3.460e-28	86.61	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 77..121
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..24
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..132
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..15
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 95..118
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..24 score: 5.0

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_246	contig	Contig_246:105116..105559 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|48437	mRNA_17874	Tribonema minus UTEX_B_3156	mRNA	Contig_246 103749..105631 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|48437|CE48436_38 ID=Trimin1|48437|CE48436_38|Name=jgi.p|Trimin1|48437|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=148bp
MPPKSQTPTAPPAAAPATPAGSSCDGVEAELSKVAQAITKVEGQIDAVEI
KVNDVEKVLQEEGKQNPEQPVYLSMNVQELKEHLKALRKKEEQLRKKEEQ
LRKKEEQLREEKAKLMDRQAMPSPDVPGVMSNDCRVHAVESWPRGVE*