Trimin1|4647|CE4646_42 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|4647
Unique Name	Trimin1\|4647\|CE4646_42
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	168

Homology

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BLAST of jgi.p|Trimin1|4647 vs. uniprot
Match: A0A836CMT0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMT0_9STRA)

HSP 1 Score: 256 bits (654), Expect = 3.770e-85
Identity = 167/167 (100.00%), Postives = 167/167 (100.00%), Query Frame = 0

Query:    1 MRQHDATLERLQPRASESASSACALSKIAVVVIVLQSSFTPVWTLAVPEAPASSPALLSRGMKLPLPSDTQSALDAMNKNTNTTLRQEVEALXXXXXXXXXXXXXXXXXXXDLKQGMHDVKTDTESLRPLALDVAYVKGLVMSCTVMVALILLAMVVVVLIEIMESY 167
            MRQHDATLERLQPRASESASSACALSKIAVVVIVLQSSFTPVWTLAVPEAPASSPALLSRGMKLPLPSDTQSALDAMNKNTNTTLRQEVEALXXXXXXXXXXXXXXXXXXXDLKQGMHDVKTDTESLRPLALDVAYVKGLVMSCTVMVALILLAMVVVVLIEIMESY
Sbjct:    1 MRQHDATLERLQPRASESASSACALSKIAVVVIVLQSSFTPVWTLAVPEAPASSPALLSRGMKLPLPSDTQSALDAMNKNTNTTLRQEVEALXXXXXXXXXXXXXXXXXXXDLKQGMHDVKTDTESLRPLALDVAYVKGLVMSCTVMVALILLAMVVVVLIEIMESY 167

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|4647 vs. uniprot

BLAST of jgi.p|Trimin1|4647 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CMT0_9STRA	3.770e-85	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 82..102
None	No IPR available	GENE3D	1.20.5.170		coord: 82..129 e-value: 4.3E-6 score: 28.6

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_104	contig	Contig_104:102638..103692 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|4647	mRNA_10180	Tribonema minus UTEX_B_3156	mRNA	Contig_104 102617..103786 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|4647|CE4646_42 ID=Trimin1|4647|CE4646_42|Name=jgi.p|Trimin1|4647|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=168bp
MRQHDATLERLQPRASESASSACALSKIAVVVIVLQSSFTPVWTLAVPEA
PASSPALLSRGMKLPLPSDTQSALDAMNKNTNTTLRQEVEALREDMAAMQ
QHVGHMQGQLADLKQGMHDVKTDTESLRPLALDVAYVKGLVMSCTVMVAL
ILLAMVVVVLIEIMESY*