Trimin1|44829|CE44828_108 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|44829
Unique Name	Trimin1\|44829\|CE44828_108
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	392

Homology

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BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: A0A836CIT6_9STRA (Exonuclease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIT6_9STRA)

HSP 1 Score: 774 bits (1999), Expect = 1.130e-282
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 0

Query:    1 MGGGSEWRYTDDATAVAADATAAGTRYKLFAVISHVAPPRGGAAEAEGAPQGHLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDMGPAADVRVSAPGSADT 391
            MGGGSEWRYTDDATAVAADATAAGTRYKLFAVISHVAPPRGGAAEAEGAPQGHLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDMGPAADVRVSAPGSADT
Sbjct:    1 MGGGSEWRYTDDATAVAADATAAGTRYKLFAVISHVAPPRGGAAEAEGAPQGHLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDMGPAADVRVSAPGSADT 391

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BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: D7G787_ECTSI (Exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G787_ECTSI)

HSP 1 Score: 305 bits (780), Expect = 5.910e-91
Identity = 162/329 (49.24%), Postives = 215/329 (65.35%), Query Frame = 0

Query:   65 GGGDDAESSS-QADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYR------DESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQ-------VIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDMGPAA 379
            GGG DA+  + + +   +  WL+FND L ++T LDD RGFGP WK PC+L+YR      +E E    A         LA+ P+VF I   ++N P  +   +PP++LPG+G +VA+DAEFV L +EE RLR DGS+VVTK  RQ LARVS +D           V++DDY++Q+EPV+DHLTRFSG+   DL+P  S R +L  +R  YL+LR L D GC+ +GHGL  D R+ NL +PPSQV+DT  +WSL G+RK SLRFL+HYLL   IQ  THDS+ED+R+ALAL  KY    A G+   +  LD LY+YG+ V WK+ D G +A
Sbjct:  738 GGGRDADRGTVRGEEEEEEEWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEGENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEVNAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATS-RHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGT--FSTTLDALYKYGWEVSWKL-DGGVSA 1062

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BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: A0A6H5KX54_9PHAE (Exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX54_9PHAE)

HSP 1 Score: 305 bits (780), Expect = 2.530e-89
Identity = 158/309 (51.13%), Postives = 207/309 (66.99%), Query Frame = 0

Query:   84 WLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYR------DESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVD-------AEGQVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDMGPAA 379
            WL+FND L ++T LDD RGFGP WK PC+L+YR      +E+E    A         LA+ P+VF I   ++N P  +   +PP++LPG+G +VA+DAEFV L +EE RLR DGS+VVTK  RQ LARVS +D       A   V++DDY++Q+EPV+DHLTRFSG+   DL+P  S R +L  +R  YL+LR L D GC+ +GHGL  D R+ NL +PPSQV+DT  +WSL G+RK SLRFL+HYLL   IQ  THDS+ED+R+ALAL  KY    A G+   +  LD LY+YG+ V WK+ D G +A
Sbjct: 1321 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALARKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRYSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATS-RHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGT--FSTTLDALYKYGWEVSWKL-DGGVSA 1625

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BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: K8ZCB7_NANGC (PAB-dependent poly(A)-specific ribonuclease subunit 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8ZCB7_NANGC)

HSP 1 Score: 276 bits (707), Expect = 5.360e-87
Identity = 160/353 (45.33%), Postives = 209/353 (59.21%), Query Frame = 0

Query:   65 GGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRD-------------------------------ESEGRLPAKLCEQPPPALA---MPPAVFSIPSFAQNSPGGRKPAIP------PEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEG-QVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDMG 376
            GGG+D   S       +  W I ND L + T L+D  GF PAWK PCILLYRD                               E +G   +         LA   +PP++  +  FA  S     P  P      PE LPG G +V +DAEFV LEME   +   G+RVV K  RQ LAR+S++D    QV++DDY++ +EPV+D+LTRFSG+V EDL+P LS R  LV  R AYLKLRCL+DRG +LVGHGL KD R+IN+ VPP+QV+DT ++W L G+RK SLRFL+ YLL E IQ  THDS+ED+R A+ L QK+E+ K +G   LA+ L+ +Y+YG +  WK++  G
Sbjct:    7 GGGEDGRGSDP-----EWQWYIVNDFLVEPTILEDALGFLPAWKEPCILLYRDRTSTAAAHAAWLEQLRAAGARVAGGGKREVGEEKGENDSSADASGAGGLAVGTLPPSI-PVSIFASPSRSTATPLPPTFXXLTPEALPGRGDLVGIDAEFVQLEMETASVLETGARVVFKEGRQALARLSLLDVRSDQVMVDDYVLPSEPVMDYLTRFSGIVREDLDPSLS-RHHLVTARTAYLKLRCLIDRGVILVGHGLKKDFRIINVYVPPAQVIDTVDLWCLEGQRKISLRFLAAYLLGESIQGETHDSIEDARTAVRLYQKWEEAKKEGK--LAQVLNGVYEYGRTTGWKLQQQG 350

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BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: A0A4D9D4P1_9STRA (Exonuclease domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4P1_9STRA)

HSP 1 Score: 284 bits (727), Expect = 5.140e-84
Identity = 164/371 (44.20%), Postives = 220/371 (59.30%), Query Frame = 0

Query:   51 QGHLVLHVR---DSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDE-SEGRLPAKLCEQP---------------------------------------PPALAMPPAVFSIPSFAQNSP-GGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEG-QVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDMG 376
            +GHL+LHV+   +    GGG+D   +       +  W I ND L + T L+D  GF P WK PCILLYRD  S     A   EQ                                        PP++  P ++F+ PS +  +P       + PE LPG G +V +DAEFV LEME   +   G+RVV K  RQ LAR+S++D    QV++DDY++ +EPV+D+LTRFSG+V EDL+P LS R  LV  R AYLKLRCL+DRG +LVGHGL KD R+IN+ VPP+QV+DT ++W L G+RK SLRFL+ YLL E IQ  THDS+ED+R A+ L QK+E+ K +G   LA+ L+ +Y+YG +  WK++  G
Sbjct:  588 EGHLLLHVKVPMEGVEEGGGEDGRGTDP-----EWQWYIVNDFLVEATILEDALGFLPTWKEPCILLYRDRTSTAAAHAAWLEQLRAVGARVAGGGKREVDEEKAENDSSTDASGAGGLAVGSLPPSI--PVSIFASPSLSTATPLPPTFTPLTPEALPGRGDLVGIDAEFVQLEMETASVLETGARVVFKEGRQALARLSLLDVRSDQVMVDDYVLPSEPVMDYLTRFSGIVPEDLDPSLS-RHHLVTARTAYLKLRCLIDRGVILVGHGLKKDFRIINVYVPPAQVIDTVDLWCLEGQRKISLRFLAAYLLGESIQGETHDSIEDARTAVRLYQKWEEAKKEGK--LAQVLNGVYEYGRTTGWKLQQQG 948

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BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: A0A067CY27_SAPPC (USP domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CY27_SAPPC)

HSP 1 Score: 264 bits (674), Expect = 7.730e-76
Identity = 150/324 (46.30%), Postives = 197/324 (60.80%), Query Frame = 0

Query:   53 HLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAE-GQVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDM 375
            HL+ H+ D        D  SS   D   D  WL+FND     T   D   F   WK P +L+YR  +  R  A     P P + +P +VF  PS AQ+S       +    LP +G  VA+D EFV +EMEE  L++DG+RVVTK +RQ LARVS++  E   V +DDY++ +EPV+D+LTRFSG+VA+DLNP +S R  +VPL+AAY+KLR LVDRGC+ VGHGL KD R++NL VPP Q++DT E++  P  RK +LRFL  YL    IQ  THDS+ED+R AL L  KY  L A  +    R L ++Y  G    WK+ D+
Sbjct:  778 HLIAHILDP-------DVGSSRSRDD--DHNWLLFNDFSVTPTVGLDAVAFHVPWKFPSVLIYRQRATLRAIAT----PEPTVDIPHSVFHAPSVAQSSSSFEPLDV--ATLPQKGDRVAIDTEFVIVEMEEATLQTDGTRVVTKESRQALARVSLIHGETNTVFVDDYVLPSEPVVDYLTRFSGLVADDLNPSVS-RHHVVPLKAAYMKLRYLVDRGCLFVGHGLGKDFRIVNLFVPPEQIIDTVELYQQPNMRKIALRFLIVYLFKAHIQLETHDSIEDARAALMLHNKYRDLMA--TQEFERTLMEIYAAGRQSRWKIADL 1083

[Close]

BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: A0A485KVT7_9STRA (Aste57867_12510 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVT7_9STRA)

HSP 1 Score: 258 bits (658), Expect = 1.070e-73
Identity = 146/327 (44.65%), Postives = 191/327 (58.41%), Query Frame = 0

Query:   50 PQGHLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQ-VIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDM 375
            P  HLV HV               S  DAA    WL+ ND     T L D   F   WK P +LL+  ++E    + +     P + +P  +F  PS    +P    P      LP  G  +A+D EFV +EMEE  L++DG+R+VTK +RQ LARVSV+  E   VI+DDYI+  EPV+D+LTRFSG+VAEDLNP LS R  +V L+ AY+KLR LVD GC+ VGHGL KD R++N+ VPP QV+DT E++  P  RK +LRFL  YLL   IQ  THDS+ED+R AL L  KY  L+   ++   R L ++Y  G    WK+ D+
Sbjct:  759 PNAHLVAHVL-------------PSHDDAA----WLLINDFCVSATTLGDAVNFTSPWKYPTLLLFAKQTEAVTVSGVV----PPIQIPATIFQSPSLRPGAPAVSMPV-----LPRRGDRIAIDTEFVIVEMEEATLQTDGTRIVTKESRQSLARVSVIHGETDTVIVDDYILPNEPVVDYLTRFSGLVAEDLNPALS-RHHVVSLKTAYMKLRYLVDAGCLFVGHGLRKDFRIVNVFVPPDQVIDTVELYQQPNMRKIALRFLCAYLLKAEIQLETHDSIEDARAALKLHNKY--LELTKNNEFDRTLMEIYAAGRVCRWKIADL 1056

[Close]

BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: A0A1V9ZLE2_9STRA (USP domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLE2_9STRA)

HSP 1 Score: 256 bits (653), Expect = 6.520e-73
Identity = 143/327 (43.73%), Postives = 195/327 (59.63%), Query Frame = 0

Query:   50 PQGHLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQVI-IDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDM 375
            P  HL+ H+                  + A +  W +FND     T   D   F   WK P +L+YR  +  +  +   E   PA+A+P +VF  P+      G  +P +    LP  G  VA+D EFV +EMEE  L++DG+R+VTK +RQ LARVS++  E  V+ +DDYI+ +EPV+D+LTRFSG+VA+DLNP +S R  +VPL+AAY+KLR LVDRGC+ VGHGL KD R++NL VPP QV+DT E++  P  RK +LRFL  YL    IQ  THDS+ED+R AL L  KY +L  +      R L ++Y  G    WK+ D+
Sbjct:  778 PNAHLIAHIL------------GPETPNKAPEENWFLFNDFSVTPTVALDAVAFHVPWKYPSVLVYRRRATLQGGSTALE---PAVAIPSSVFHAPAVGV---GSAEP-LDVATLPQRGDRVAIDTEFVIVEMEEATLQTDGTRIVTKESRQALARVSLIHGETNVVFVDDYILSSEPVVDYLTRFSGLVADDLNPAVS-RHHVVPLKAAYMKLRYLVDRGCLFVGHGLGKDFRIVNLFVPPDQVIDTVELYQQPNMRKIALRFLVVYLFKAHIQLETHDSIEDARAALMLHNKYRELMTKNE--FERTLMEIYAAGRQSRWKIADL 1082

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BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: A0A024UA66_9STRA (Exonuclease domain-containing protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UA66_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.030e-72
Identity = 143/327 (43.73%), Postives = 192/327 (58.72%), Query Frame = 0

Query:   50 PQGHLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQ-VIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDM 375
            P  HLV HV                      DG W++ ND     + +DD   F P WK P +LLYR E     P  L    PPA  +P  +F     A  +P   +P +    LP +G  VA+D EFV +EMEE  L++DG+RVV K +RQ LARVSV+  E   V++DDYI+  EPV+D+LTRFSG+  EDL+P  S+ P +V L+ AY+KLR LVD GC+ VGHGL KD R++N+ VPP+Q++DT E++  P  RK +LRFL  YLL   IQ  THDS+ED+R AL L  KY +L A  ++   + L ++Y  G    WK+ D+
Sbjct:  762 PNAHLVTHV-------------------VGPDGLWMLLNDFTVSESSVDDAINFSPPWKYPSVLLYRREGS---PVVLDTTAPPA-PIPSTIFDA---APLNPTVARPRMSTVTLPKKGDRVAIDTEFVIVEMEEATLQTDGTRVVIKESRQSLARVSVIHGETDAVLVDDYILPNEPVVDYLTRFSGLTGEDLDPARSRHP-VVSLKTAYMKLRYLVDAGCLFVGHGLHKDFRIVNIFVPPNQIIDTVELYQQPNMRKIALRFLCAYLLKAEIQLDTHDSIEDARAALRLHNKYLELVA--TNEFDKTLVEIYSAGRHCRWKIADL 1059

[Close]

BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: A0A1V9ZPV6_9STRA (PAB-dependent poly(A)-specific ribonuclease subunit 2 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZPV6_9STRA)

HSP 1 Score: 254 bits (650), Expect = 1.680e-72
Identity = 139/327 (42.51%), Postives = 197/327 (60.24%), Query Frame = 0

Query:   50 PQGHLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQVII-DDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDM 375
            P  HL+ H+        G +    S  +      W +FND     T + D   F   WK P +L+YR  S  +      E   P +++PP VF  PS + +S     P +  + LP +G  VA+D EFV +EMEE  L++DG+R+VTK +RQ LARV+++  E +V+  DDYI+ +EPV+D+L RFSG+V+EDL+P LS R  ++ L+ AY+KLR LVDRGC+ VGHGL KD R++NL VPP Q++DT E++  P  RK +LRFL  YL    IQ  THDS+ED+R AL L  KY++L ++      R L ++Y  G    WK+ D+
Sbjct:  777 PNAHLIAHIL-------GPEVGIKSYEE-----NWYLFNDFCVTPTVVLDAVAFHVPWKFPSVLVYRQRSSLQPSNPSVE---PTVSIPPTVFHAPSLSSSS----SPLVDLDSLPQKGDRVAIDTEFVIVEMEEATLQTDGTRIVTKESRQALARVTLIHGETEVVFADDYILPSEPVVDYLNRFSGLVSEDLSPSLS-RHQVLALKNAYMKLRYLVDRGCLFVGHGLGKDFRIVNLFVPPDQIIDTVELYQQPNMRKIALRFLIVYLFKAHIQLETHDSIEDARAALMLHNKYKELMSKNE--FERTLMEIYAAGRQSRWKIADL 1081

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|44829 vs. uniprot

BLAST of jgi.p|Trimin1|44829 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A836CIT6_9STRA	1.130e-282	100.00	Exonuclease-domain-containing protein n=1 Tax=Trib...	[more]
D7G787_ECTSI	5.910e-91	49.24	Exonuclease domain-containing protein n=1 Tax=Ecto...	[more]
A0A6H5KX54_9PHAE	2.530e-89	51.13	Exonuclease domain-containing protein n=1 Tax=Ecto...	[more]
K8ZCB7_NANGC	5.360e-87	45.33	PAB-dependent poly(A)-specific ribonuclease subuni...	[more]
A0A4D9D4P1_9STRA	5.140e-84	44.20	Exonuclease domain-containing protein n=1 Tax=Nann...	[more]
A0A067CY27_SAPPC	7.730e-76	46.30	USP domain-containing protein n=2 Tax=Saprolegnia ...	[more]
A0A485KVT7_9STRA	1.070e-73	44.65	Aste57867_12510 protein n=1 Tax=Aphanomyces stella...	[more]
A0A1V9ZLE2_9STRA	6.520e-73	43.73	USP domain-containing protein n=1 Tax=Achlya hypog...	[more]
A0A024UA66_9STRA	1.030e-72	43.73	Exonuclease domain-containing protein n=4 Tax=Apha...	[more]
A0A1V9ZPV6_9STRA	1.680e-72	42.51	PAB-dependent poly(A)-specific ribonuclease subuni...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013520	Exonuclease, RNase T/DNA polymerase III	SMART	SM00479	exoiiiendus	coord: 169..349 e-value: 2.5E-19 score: 80.2
IPR013520	Exonuclease, RNase T/DNA polymerase III	PFAM	PF00929	RNase_T	coord: 171..339 e-value: 1.3E-14 score: 55.1
None	No IPR available	GENE3D	3.90.70.10	Cysteine proteinases	coord: 4..122 e-value: 3.1E-10 score: 41.4
None	No IPR available	PANTHER	PTHR15728	DEADENYLATION COMPLEX CATALYTIC SUBUNIT PAN2	coord: 15..373
None	No IPR available	CDD	cd02257	Peptidase_C19	coord: 25..116 e-value: 5.33066E-7 score: 48.2483
IPR036397	Ribonuclease H superfamily	GENE3D	3.30.420.10		coord: 167..363 e-value: 1.2E-37 score: 131.2
IPR028889	Ubiquitin specific protease domain	PROSITE	PS50235	USP_3	coord: 1..118 score: 10.405258
IPR012337	Ribonuclease H-like superfamily	SUPERFAMILY	53098	Ribonuclease H-like	coord: 168..343

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_224	contig	Contig_224:7067..14229 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|44829	mRNA_18026	Tribonema minus UTEX_B_3156	mRNA	Contig_224 6976..14265 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|44829|CE44828_108 ID=Trimin1|44829|CE44828_108|Name=jgi.p|Trimin1|44829|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=392bp
MGGGSEWRYTDDATAVAADATAAGTRYKLFAVISHVAPPRGGAAEAEGAP
QGHLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDV
RGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQN
SPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPAR
QGLARVSVVDAEGQVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRP
SLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMW
SLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQG
SDALARALDDLYQYGYSVEWKVRDMGPAADVRVSAPGSADT*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013520	Exonuclease_RNaseT/DNA_pol3
IPR036397	RNaseH_sf
IPR028889	USP_dom
IPR012337	RNaseH-like_sf