mRNA_18026 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|44829
Unique NamemRNA_18026
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: A0A836CIT6_9STRA (Exonuclease-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIT6_9STRA)

HSP 1 Score: 775 bits (2000), Expect = 4.280e-282
Identity = 391/391 (100.00%), Postives = 391/391 (100.00%), Query Frame = 1 
Query:   37 MGGGSEWRYTDDATAVAADATAAGTRYKLFAVISHVAPPRGGAAEAEGAPQGHLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDMGPAADVRVSAPGSADT 1209
            MGGGSEWRYTDDATAVAADATAAGTRYKLFAVISHVAPPRGGAAEAEGAPQGHLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDMGPAADVRVSAPGSADT
Sbjct:    1 MGGGSEWRYTDDATAVAADATAAGTRYKLFAVISHVAPPRGGAAEAEGAPQGHLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDMGPAADVRVSAPGSADT 391
[Close]
BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: D7G787_ECTSI (Exonuclease domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G787_ECTSI)

HSP 1 Score: 304 bits (779), Expect = 3.310e-90
Identity = 159/322 (49.38%), Postives = 211/322 (65.53%), Query Frame = 1 
Query:  229 GGGDDAESSS-QADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYR------DESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQ-------VIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKV 1152
            GGG DA+  + + +   +  WL+FND L ++T LDD RGFGP WK PC+L+YR      +E E    A         LA+ P+VF I   ++N P  +   +PP++LPG+G +VA+DAEFV L +EE RLR DGS+VVTK  RQ LARVS +D           V++DDY++Q+EPV+DHLTRFSG+   DL+P  S R +L  +R  YL+LR L D GC+ +GHGL  D R+ NL +PPSQV+DT  +WSL G+RK SLRFL+HYLL   IQ  THDS+ED+R+ALAL  KY    A G+   +  LD LY+YG+ V WK+
Sbjct:  738 GGGRDADRGTVRGEEEEEEEWLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEGENARRAAAMALTKKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRHSGSEVNAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATS-RHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGT--FSTTLDALYKYGWEVSWKL 1056
[Close]
BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: A0A6H5KX54_9PHAE (Exonuclease domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KX54_9PHAE)

HSP 1 Score: 304 bits (779), Expect = 1.400e-88
Identity = 155/302 (51.32%), Postives = 203/302 (67.22%), Query Frame = 1 
Query:  286 WLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYR------DESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVD-------AEGQVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKV 1152
            WL+FND L ++T LDD RGFGP WK PC+L+YR      +E+E    A         LA+ P+VF I   ++N P  +   +PP++LPG+G +VA+DAEFV L +EE RLR DGS+VVTK  RQ LARVS +D       A   V++DDY++Q+EPV+DHLTRFSG+   DL+P  S R +L  +R  YL+LR L D GC+ +GHGL  D R+ NL +PPSQV+DT  +WSL G+RK SLRFL+HYLL   IQ  THDS+ED+R+ALAL  KY    A G+   +  LD LY+YG+ V WK+
Sbjct: 1321 WLMFNDFLVEKTVLDDARGFGPEWKEPCVLVYRRVPSAEEEAENARRAAAMALARKRLAITPSVFDIAPLSKNRPVSQVVRLPPDRLPGKGDIVAIDAEFVSLTVEESRLRGDGSKVVTKQGRQSLARVSALDGRYSGSEANAIVMMDDYVVQSEPVVDHLTRFSGITPGDLDPATS-RHNLHHMRTVYLRLRWLADAGCIFLGHGLDNDFRMCNLTLPPSQVIDTVHLWSLAGQRKISLRFLAHYLLKINIQGETHDSIEDARIALALYNKYRSHVAAGT--FSTTLDALYKYGWEVSWKL 1619
[Close]
BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: K8ZCB7_NANGC (PAB-dependent poly(A)-specific ribonuclease subunit 2 n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8ZCB7_NANGC)

HSP 1 Score: 276 bits (706), Expect = 2.900e-86
Identity = 160/353 (45.33%), Postives = 209/353 (59.21%), Query Frame = 1 
Query:  229 GGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRD-------------------------------ESEGRLPAKLCEQPPPALA---MPPAVFSIPSFAQNSPGGRKPAIP------PEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEG-QVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDMG 1164
            GGG+D   S       +  W I ND L + T L+D  GF PAWK PCILLYRD                               E +G   +         LA   +PP++  +  FA  S     P  P      PE LPG G +V +DAEFV LEME   +   G+RVV K  RQ LAR+S++D    QV++DDY++ +EPV+D+LTRFSG+V EDL+P LS R  LV  R AYLKLRCL+DRG +LVGHGL KD R+IN+ VPP+QV+DT ++W L G+RK SLRFL+ YLL E IQ  THDS+ED+R A+ L QK+E+ K +G   LA+ L+ +Y+YG +  WK++  G
Sbjct:    7 GGGEDGRGSDP-----EWQWYIVNDFLVEPTILEDALGFLPAWKEPCILLYRDRTSTAAAHAAWLEQLRAAGARVAGGGKREVGEEKGENDSSADASGAGGLAVGTLPPSI-PVSIFASPSRSTATPLPPTFXXLTPEALPGRGDLVGIDAEFVQLEMETASVLETGARVVFKEGRQALARLSLLDVRSDQVMVDDYVLPSEPVMDYLTRFSGIVREDLDPSLS-RHHLVTARTAYLKLRCLIDRGVILVGHGLKKDFRIINVYVPPAQVIDTVDLWCLEGQRKISLRFLAAYLLGESIQGETHDSIEDARTAVRLYQKWEEAKKEGK--LAQVLNGVYEYGRTTGWKLQQQG 350
[Close]
BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: A0A4D9D4P1_9STRA (Exonuclease domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D4P1_9STRA)

HSP 1 Score: 284 bits (726), Expect = 2.790e-83
Identity = 164/371 (44.20%), Postives = 220/371 (59.30%), Query Frame = 1 
Query:  187 QGHLVLHVR---DSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDE-SEGRLPAKLCEQP---------------------------------------PPALAMPPAVFSIPSFAQNSP-GGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEG-QVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDMG 1164
            +GHL+LHV+   +    GGG+D   +       +  W I ND L + T L+D  GF P WK PCILLYRD  S     A   EQ                                        PP++  P ++F+ PS +  +P       + PE LPG G +V +DAEFV LEME   +   G+RVV K  RQ LAR+S++D    QV++DDY++ +EPV+D+LTRFSG+V EDL+P LS R  LV  R AYLKLRCL+DRG +LVGHGL KD R+IN+ VPP+QV+DT ++W L G+RK SLRFL+ YLL E IQ  THDS+ED+R A+ L QK+E+ K +G   LA+ L+ +Y+YG +  WK++  G
Sbjct:  588 EGHLLLHVKVPMEGVEEGGGEDGRGTDP-----EWQWYIVNDFLVEATILEDALGFLPTWKEPCILLYRDRTSTAAAHAAWLEQLRAVGARVAGGGKREVDEEKAENDSSTDASGAGGLAVGSLPPSI--PVSIFASPSLSTATPLPPTFTPLTPEALPGRGDLVGIDAEFVQLEMETASVLETGARVVFKEGRQALARLSLLDVRSDQVMVDDYVLPSEPVMDYLTRFSGIVPEDLDPSLS-RHHLVTARTAYLKLRCLIDRGVILVGHGLKKDFRIINVYVPPAQVIDTVDLWCLEGQRKISLRFLAAYLLGESIQGETHDSIEDARTAVRLYQKWEEAKKEGK--LAQVLNGVYEYGRTTGWKLQQQG 948
[Close]
BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: A0A067CY27_SAPPC (USP domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CY27_SAPPC)

HSP 1 Score: 263 bits (673), Expect = 3.990e-75
Identity = 150/324 (46.30%), Postives = 197/324 (60.80%), Query Frame = 1 
Query:  193 HLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAE-GQVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDM 1161
            HL+ H+ D        D  SS   D   D  WL+FND     T   D   F   WK P +L+YR  +  R  A     P P + +P +VF  PS AQ+S       +    LP +G  VA+D EFV +EMEE  L++DG+RVVTK +RQ LARVS++  E   V +DDY++ +EPV+D+LTRFSG+VA+DLNP +S R  +VPL+AAY+KLR LVDRGC+ VGHGL KD R++NL VPP Q++DT E++  P  RK +LRFL  YL    IQ  THDS+ED+R AL L  KY  L A  +    R L ++Y  G    WK+ D+
Sbjct:  778 HLIAHILDP-------DVGSSRSRDD--DHNWLLFNDFSVTPTVGLDAVAFHVPWKFPSVLIYRQRATLRAIAT----PEPTVDIPHSVFHAPSVAQSSSSFEPLDV--ATLPQKGDRVAIDTEFVIVEMEEATLQTDGTRVVTKESRQALARVSLIHGETNTVFVDDYVLPSEPVVDYLTRFSGLVADDLNPSVS-RHHVVPLKAAYMKLRYLVDRGCLFVGHGLGKDFRIVNLFVPPEQIIDTVELYQQPNMRKIALRFLIVYLFKAHIQLETHDSIEDARAALMLHNKYRDLMA--TQEFERTLMEIYAAGRQSRWKIADL 1083
[Close]
BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: A0A485KVT7_9STRA (Aste57867_12510 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KVT7_9STRA)

HSP 1 Score: 257 bits (657), Expect = 5.450e-73
Identity = 146/327 (44.65%), Postives = 191/327 (58.41%), Query Frame = 1 
Query:  184 PQGHLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQ-VIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDM 1161
            P  HLV HV               S  DAA    WL+ ND     T L D   F   WK P +LL+  ++E    + +     P + +P  +F  PS    +P    P      LP  G  +A+D EFV +EMEE  L++DG+R+VTK +RQ LARVSV+  E   VI+DDYI+  EPV+D+LTRFSG+VAEDLNP LS R  +V L+ AY+KLR LVD GC+ VGHGL KD R++N+ VPP QV+DT E++  P  RK +LRFL  YLL   IQ  THDS+ED+R AL L  KY  L+   ++   R L ++Y  G    WK+ D+
Sbjct:  759 PNAHLVAHVL-------------PSHDDAA----WLLINDFCVSATTLGDAVNFTSPWKYPTLLLFAKQTEAVTVSGVV----PPIQIPATIFQSPSLRPGAPAVSMPV-----LPRRGDRIAIDTEFVIVEMEEATLQTDGTRIVTKESRQSLARVSVIHGETDTVIVDDYILPNEPVVDYLTRFSGLVAEDLNPALS-RHHVVSLKTAYMKLRYLVDAGCLFVGHGLRKDFRIVNVFVPPDQVIDTVELYQQPNMRKIALRFLCAYLLKAEIQLETHDSIEDARAALKLHNKY--LELTKNNEFDRTLMEIYAAGRVCRWKIADL 1056
[Close]
BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: A0A1V9ZLE2_9STRA (USP domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZLE2_9STRA)

HSP 1 Score: 255 bits (652), Expect = 3.300e-72
Identity = 143/327 (43.73%), Postives = 195/327 (59.63%), Query Frame = 1 
Query:  184 PQGHLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQVI-IDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDM 1161
            P  HL+ H+                  + A +  W +FND     T   D   F   WK P +L+YR  +  +  +   E   PA+A+P +VF  P+      G  +P +    LP  G  VA+D EFV +EMEE  L++DG+R+VTK +RQ LARVS++  E  V+ +DDYI+ +EPV+D+LTRFSG+VA+DLNP +S R  +VPL+AAY+KLR LVDRGC+ VGHGL KD R++NL VPP QV+DT E++  P  RK +LRFL  YL    IQ  THDS+ED+R AL L  KY +L  +      R L ++Y  G    WK+ D+
Sbjct:  778 PNAHLIAHIL------------GPETPNKAPEENWFLFNDFSVTPTVALDAVAFHVPWKYPSVLVYRRRATLQGGSTALE---PAVAIPSSVFHAPAVGV---GSAEP-LDVATLPQRGDRVAIDTEFVIVEMEEATLQTDGTRIVTKESRQALARVSLIHGETNVVFVDDYILSSEPVVDYLTRFSGLVADDLNPAVS-RHHVVPLKAAYMKLRYLVDRGCLFVGHGLGKDFRIVNLFVPPDQVIDTVELYQQPNMRKIALRFLVVYLFKAHIQLETHDSIEDARAALMLHNKYRELMTKNE--FERTLMEIYAAGRQSRWKIADL 1082
[Close]
BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: A0A024UA66_9STRA (Exonuclease domain-containing protein n=4 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UA66_9STRA)

HSP 1 Score: 254 bits (650), Expect = 5.190e-72
Identity = 143/327 (43.73%), Postives = 192/327 (58.72%), Query Frame = 1 
Query:  184 PQGHLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQ-VIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDM 1161
            P  HLV HV                      DG W++ ND     + +DD   F P WK P +LLYR E     P  L    PPA  +P  +F     A  +P   +P +    LP +G  VA+D EFV +EMEE  L++DG+RVV K +RQ LARVSV+  E   V++DDYI+  EPV+D+LTRFSG+  EDL+P  S+ P +V L+ AY+KLR LVD GC+ VGHGL KD R++N+ VPP+Q++DT E++  P  RK +LRFL  YLL   IQ  THDS+ED+R AL L  KY +L A  ++   + L ++Y  G    WK+ D+
Sbjct:  762 PNAHLVTHV-------------------VGPDGLWMLLNDFTVSESSVDDAINFSPPWKYPSVLLYRREGS---PVVLDTTAPPA-PIPSTIFDA---APLNPTVARPRMSTVTLPKKGDRVAIDTEFVIVEMEEATLQTDGTRVVIKESRQSLARVSVIHGETDAVLVDDYILPNEPVVDYLTRFSGLTGEDLDPARSRHP-VVSLKTAYMKLRYLVDAGCLFVGHGLHKDFRIVNIFVPPNQIIDTVELYQQPNMRKIALRFLCAYLLKAEIQLDTHDSIEDARAALRLHNKYLELVA--TNEFDKTLVEIYSAGRHCRWKIADL 1059
[Close]
BLAST of jgi.p|Trimin1|44829 vs. uniprot
Match: A0A1V9ZPV6_9STRA (PAB-dependent poly(A)-specific ribonuclease subunit 2 (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZPV6_9STRA)

HSP 1 Score: 254 bits (649), Expect = 8.490e-72
Identity = 139/327 (42.51%), Postives = 197/327 (60.24%), Query Frame = 1 
Query:  184 PQGHLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDVRGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQNSPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPARQGLARVSVVDAEGQVII-DDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRPSLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMWSLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQGSDALARALDDLYQYGYSVEWKVRDM 1161
            P  HL+ H+        G +    S  +      W +FND     T + D   F   WK P +L+YR  S  +      E   P +++PP VF  PS + +S     P +  + LP +G  VA+D EFV +EMEE  L++DG+R+VTK +RQ LARV+++  E +V+  DDYI+ +EPV+D+L RFSG+V+EDL+P LS R  ++ L+ AY+KLR LVDRGC+ VGHGL KD R++NL VPP Q++DT E++  P  RK +LRFL  YL    IQ  THDS+ED+R AL L  KY++L ++      R L ++Y  G    WK+ D+
Sbjct:  777 PNAHLIAHIL-------GPEVGIKSYEE-----NWYLFNDFCVTPTVVLDAVAFHVPWKFPSVLVYRQRSSLQPSNPSVE---PTVSIPPTVFHAPSLSSSS----SPLVDLDSLPQKGDRVAIDTEFVIVEMEEATLQTDGTRIVTKESRQALARVTLIHGETEVVFADDYILPSEPVVDYLNRFSGLVSEDLSPSLS-RHQVLALKNAYMKLRYLVDRGCLFVGHGLGKDFRIVNLFVPPDQIIDTVELYQQPNMRKIALRFLIVYLFKAHIQLETHDSIEDARAALMLHNKYKELMSKNE--FERTLMEIYAAGRQSRWKIADL 1081
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|44829 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIT6_9STRA4.280e-282100.00Exonuclease-domain-containing protein n=1 Tax=Trib... [more]
D7G787_ECTSI3.310e-9049.38Exonuclease domain-containing protein n=1 Tax=Ecto... [more]
A0A6H5KX54_9PHAE1.400e-8851.32Exonuclease domain-containing protein n=1 Tax=Ecto... [more]
K8ZCB7_NANGC2.900e-8645.33PAB-dependent poly(A)-specific ribonuclease subuni... [more]
A0A4D9D4P1_9STRA2.790e-8344.20Exonuclease domain-containing protein n=1 Tax=Nann... [more]
A0A067CY27_SAPPC3.990e-7546.30USP domain-containing protein n=2 Tax=Saprolegnia ... [more]
A0A485KVT7_9STRA5.450e-7344.65Aste57867_12510 protein n=1 Tax=Aphanomyces stella... [more]
A0A1V9ZLE2_9STRA3.300e-7243.73USP domain-containing protein n=1 Tax=Achlya hypog... [more]
A0A024UA66_9STRA5.190e-7243.73Exonuclease domain-containing protein n=4 Tax=Apha... [more]
A0A1V9ZPV6_9STRA8.490e-7242.51PAB-dependent poly(A)-specific ribonuclease subuni... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_224contigContig_224:6976..14265 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|44829|CE44828_108
BRITEko00000,ko00001,ko01000,ko03019
KEGG Pathwayko03018,map03018
KEGG koko:K12571
EC3.1.13.4
GOsGO:0000003,GO:0008150
Descriptionpoly(A)-specific ribonuclease activity
COG categoryA
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0847@1|root,KOG1275@2759|Eukaryota
Evalue9.69e-92
Seed ortholog2880.D7G787
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionExonuclease, RNase T/DNA polymerase III
Ec32 orthologEc-04_003770.1
TranscriptId45151
TrackFilteredModels1
ProteinId44829
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|44829gene_18026Tribonema minus UTEX_B_3156 geneContig_224 6976..14265 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|44829Trimin1|44829|CE44828_108Tribonema minus UTEX_B_3156 polypeptideContig_224 7067..14229 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18026_9exon_18026_9Tribonema minus UTEX_B_3156 exonContig_224 6976..7210 -
exon_18026_8exon_18026_8Tribonema minus UTEX_B_3156 exonContig_224 7899..8009 -
exon_18026_7exon_18026_7Tribonema minus UTEX_B_3156 exonContig_224 8470..8553 -
exon_18026_6exon_18026_6Tribonema minus UTEX_B_3156 exonContig_224 9918..10112 -
exon_18026_5exon_18026_5Tribonema minus UTEX_B_3156 exonContig_224 10718..10912 -
exon_18026_4exon_18026_4Tribonema minus UTEX_B_3156 exonContig_224 11859..11981 -
exon_18026_3exon_18026_3Tribonema minus UTEX_B_3156 exonContig_224 12426..12524 -
exon_18026_2exon_18026_2Tribonema minus UTEX_B_3156 exonContig_224 13341..13534 -
exon_18026_1exon_18026_1Tribonema minus UTEX_B_3156 exonContig_224 14199..14265 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_18026UTR3_18026Tribonema minus UTEX_B_3156 three_prime_UTRContig_224 6976..7066 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18026CDS_18026Tribonema minus UTEX_B_3156 CDSContig_224 14199..14229 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_18026UTR5_18026Tribonema minus UTEX_B_3156 five_prime_UTRContig_224 14230..14265 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18026 ID=mRNA_18026|Name=jgi.p|Trimin1|44829|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1303bp|location=Sequence derived from alignment at Contig_224:6976..14265- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
GCGAAGGTGGTGGTGGGAGAGCGCGTGGACCCGTTGATGGGCGGCGGCAG
CGAGTGGCGGTATACAGACGACGCGACAGCCGTGGCAGCAGATGCCACTG
CGGCGGGGACGCGCTACAAGCTGTTTGCCGTCATCAGCCACGTGGCGCCG
CCGCGCGGCGGCGCCGCGGAGGCGGAGGGCGCGCCGCAGGGGCACCTGGT
GCTGCACGTGCGCGACTCCACGGCCGCTGGTGGCGGCGACGACGCTGAGA
GTAGCAGCCAGGCGGATGCCGCGGGCGATGGCGGCTGGCTCATCTTCAAT
GACATGCTGTCGCAGAGGACCTTTCTGGACGACGTGCGCGGGTTTGGGCC
GGCGTGGAAGAACCCCTGCATCCTGCTGTACCGCGACGAGAGCGAGGGCC
GCCTGCCGGCCAAACTCTGCGAGCAGCCGCCGCCCGCGCTTGCCATGCCG
CCGGCGGTGTTCTCCATACCGTCGTTTGCGCAGAACTCGCCAGGGGGCCG
CAAGCCCGCGATACCCCCCGAGAAGCTGCCCGGCGAGGGCGCGGTGGTCG
CGCTGGACGCCGAGTTTGTGTGCCTGGAGATGGAGGAGGTGCGGCTGCGC
AGCGACGGGTCGCGCGTCGTCACCAAGCCCGCGCGCCAGGGGCTCGCGCG
TGTGTCCGTGGTGGACGCGGAGGGGCAGGTCATCATCGACGACTACATAA
TCCAGACGGAGCCAGTGCTCGACCACCTGACGCGCTTCAGCGGCGTCGTC
GCGGAGGACCTCAATCCGTTCCTCTCGCAGCGGCCGAGCCTCGTGCCGCT
GCGCGCCGCGTACCTCAAGCTGCGCTGCCTCGTGGACCGCGGCTGCGTGC
TGGTCGGGCACGGCCTCGCCAAGGACCTCCGCGTCATCAACCTGGTGGTG
CCGCCGTCGCAGGTGCTCGACACGGCGGAAATGTGGAGCTTGCCGGGGCG
ACGAAAGGCAAGCCTGCGCTTCCTGAGCCACTACCTTCTGTCGGAGCGCA
TACAGGAGAGCACGCACGACTCCGTCGAAGACAGCCGCATGGCGCTTGCG
CTGTGCCAGAAGTACGAGAAACTCAAGGCGCAGGGCAGCGATGCGCTCGC
GCGCGCCCTCGACGACTTGTACCAGTACGGCTACTCGGTAGAGTGGAAGG
TTCGAGACATGGGGCCGGCCGCGGACGTTCGCGTGAGCGCTCCAGGATCA
GCCGACACTTGAGTCGTGAGAGACGAGTCGGTGGGCCGCTGTGAAGCTTG
CGTGGGCACCGGTGCCGCGCTGCACGTAATGTACCGCCGACACGGCCCTC
GCG
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protein sequence of jgi.p|Trimin1|44829

>Trimin1|44829|CE44828_108 ID=Trimin1|44829|CE44828_108|Name=jgi.p|Trimin1|44829|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=392bp
MGGGSEWRYTDDATAVAADATAAGTRYKLFAVISHVAPPRGGAAEAEGAP
QGHLVLHVRDSTAAGGGDDAESSSQADAAGDGGWLIFNDMLSQRTFLDDV
RGFGPAWKNPCILLYRDESEGRLPAKLCEQPPPALAMPPAVFSIPSFAQN
SPGGRKPAIPPEKLPGEGAVVALDAEFVCLEMEEVRLRSDGSRVVTKPAR
QGLARVSVVDAEGQVIIDDYIIQTEPVLDHLTRFSGVVAEDLNPFLSQRP
SLVPLRAAYLKLRCLVDRGCVLVGHGLAKDLRVINLVVPPSQVLDTAEMW
SLPGRRKASLRFLSHYLLSERIQESTHDSVEDSRMALALCQKYEKLKAQG
SDALARALDDLYQYGYSVEWKVRDMGPAADVRVSAPGSADT*
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mRNA from alignment at Contig_224:6976..14265-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18026 ID=mRNA_18026|Name=jgi.p|Trimin1|44829|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=7290bp|location=Sequence derived from alignment at Contig_224:6976..14265- (Tribonema minus UTEX_B_3156 )
GCGAAGGTGGTGGTGGGAGAGCGCGTGGACCCGTTGATGGGCGGCGGCAG
CGAGTGGCGGTATACAGGTGCGCGGGGCACTGCTGCGGATGGCGTGCCAC
GTGGACGCACGTGCGTGCACGCCAGGTTTACACATGCACAGTCATTATGT
CATCGTGATGCTTTGAGTGCGTGTCGTCGAGGGGTGCCGCCGCCTGTGTT
TCGTACATGCTTCAAAGTAGGGTATTGCGGGAAACGGGGAGGTGGGGCAG
CAAGTGGAGTGGTGGCATGTATATACGTCGAAGTATGTGCTGTTTTGCCT
TAGTGCGGAGGCGCGCTGTGTGGATTGAGCACGTTGCATCCGTTGTGGCT
TGAGTGCGCTAGAGCGGGTCAGCACACAGGGGAGTGTGGGGGGAAGGGGA
AGCAGCCACATCTGCCACCTTAACTGGCCAAAAGTCGGGAGCAAGTGCCG
CAAGCTTTCAAACGCTGTTGTGAATGCACCCCTCTGTGGTCTCATCTCGT
GGCCCTCTGTCAGAAGCCCTGCTACCAGGATGACTACAGTAGCTGTAAGT
AAGCGGCGCGCGCATTCATGCAGCTCCCGACAACCCTCAGGGATAGGGTT
ATGGTCAGTCTGCAGCGACTGTGGCTTGCAGCGCAGCCCTCCTCCTTCGG
TGACCCGCAGCAGCTGCTCAGTTCACGTGTGCGCAGCGCTGAGTACGCGT
CACTTGCTCTCTCTCACTGGCTGGCGCGCAGACGACGCGACAGCCGTGGC
AGCAGATGCCACTGCGGCGGGGACGCGCTACAAGCTGTTTGCCGTCATCA
GCCACGTGGCGCCGCCGCGCGGCGGCGCCGCGGAGGCGGAGGGCGCGCCG
CAGGGGCACCTGGTGCTGCACGTGCGCGACTCCACGGCCGCTGGTGGCGG
CGACGACGCTGAGAGTAGCAGCCAGGTATGTAGGCATCGTATTATCAGTA
CTACTTCAACTTGAAGTATATTGATGCTGATGAATGCTGGTGCTGCACGT
GCGCGACCCCGCGGCCGCTGGCAGCGGCGACGCGGAGGGTAGCAGCCAGG
TATGTAGGCATGGTATATATACATATACTTCACTTGAAGTATGTGGATGC
TGTGGCATCACGAAGGGTAGCCAGGTATGCAGGCATGGTGTCATCAGTAC
TACTTCAACTTAGGTATATGGATGATGCGCCGCGGAGACGGAGGGCATGC
AGCAGGGGCACCTGGTGCTGCACGTGCGCGACCCCGCGGCCGCTGGCAGC
GGCGACGCGGAGGGTAGCAGCCAGGTATGTAGGCATAGTCTTTACATGCT
AGTTCAGCTTTAAATATATACTTTTATAAGTATGTAGATGCTGGTGAAGT
ATATAGATGCTGGTGCTGCACGTGCGCGACCCCGCGGCCGATGGCGGCGG
CGACGCGGAGGGTAGCAGCCAGGTATGTAAGTATGGCATATATCAGTAAT
ACCTCAACTGGAAGTATACGGATGCTGGTGAAGTATAGATGCTGGTGCTG
CACATGCGCGACCCCGCTGCCGCTGGTGGCGGCGACGACGCTGGGGGTAG
CAGCCAGGTATGCGGCGAAGGGAGCATGGGAAATGGGCTGGTTACTGCTG
TGCTGCATTGCTCGCTACGGTGTCGTCATGATGCCGCAGCGATGAAAGCG
TCATCGGCAACCCCCGCCCCCCCCGCCATGCACACTTCAAGCTGCACTCT
TCAATGGCTCTTTGGCGTTACGCGCCTGTGGGCGTATGCAGGCGGATGCC
GCGGGCGATGGCGGCTGGCTCATCTTCAATGACATGCTGTCGCAGAGGAC
CTTTCTGGACGACGTGCGCGGGTTTGGGCCGGCGTGGAAGGTGCGTTGTC
GAGCGCTGCTGCGTGCGCACATGCGCGGCGGAGGTGTTCAGCAGTTCAGC
AATGTGTGTGTGGTTTTTTGCGACGCAGTCTTGCCACGTGTTCACGCTTG
GGTTTTGCGCCACTCTGCCTGCTGTTGCCTGCCGCAGTTGAGTGTGTCAT
GTCATCGATTTGCGCACGCTCTCAGCAGTGCCTCTGAGGCGGCAGTTGAG
CAGATGAAGAGGTGATGACATTGAACAGTGAGTGCGCTCACCTCTTGGCC
TTACCTGCGTAACGCGGCCCTGCGCGCCGCCGCTGCCGCTGGCCCTCTCC
CCCCCCTCCCCCCGTACCACGACACTTGCGCCAAGCGCCTGCACACCTCC
TCACCGCGTTGAATGTTCAACTCGTGTGAGAGCGTCGCCACTTGAGCTTA
CCTGAGCATCGCCGCGCCGCCGCCGCTACCACAGAACCCCTGCATCCTGC
TGTACCGCGACGAGAGCGAGGGCCGCCTGCCGGCCAAACTCTGCGAGCAG
CCGCCGCCCGCGCTTGCCATGCCGCCGGCGGTGTTCTCCATACCGTCGTT
TGCGCAGGTGCGTGCGTGCGTGCGTGCGTGCGTGCGTGCTGGACTTTTGA
GACTGTTTCTTGCGTGCGCGCGCGCGCTGCGCCTCCGCCGGCGACTGCGT
CTGTGGCGCGCGCCGCGCTGCTGCCGCGCCGCAGCACGGGCGCTCAGCGC
CAGCGCTCGCTCGCGAATGCCGCGGCTTCCATGCGCGCATTGTCGTGCAG
AAACGGGTACACTGCGGATTGGGCTGGAGCTTTTTCTTACCTGTTGAGGA
GCGCCGGTGCTGTGCCGACATGAAGTTCATCACGTGCAGGCGCGTCAGTG
ATCGAATGCACGCTCGGGCGCGAGCCGCACTGCGCAGGGCACAACTGGAC
GAAGGCGTATTTGGGTTATGACGGACAATGCGCTTGCGAGGAGGACCTGC
TTGGCTGCGGGCCGCGCCACAGCATGCGCTCGCCACTTCCAGCATGCGCG
GTGCTCATGAGGTTGAGACAGCGGGCCCACTGGCACGCCTAATACATACA
GAGCACATGTTCATGAATATGTACATAGCGCTGAAGCTGGACTCACGCGC
GAATCACGAGCTGACGCAGCCGCGGTTCAGGGCCTCGGGCAGCCAGGACG
ATCGGCGTCGTCGCGGAGCGCAGTGGTTACGCAGCGCGTTTACCGCTGGC
GCGCCGCGCAACAAGCACACTTCGAGGACCGCATATCACTCCGAGGGGTC
ACGCCAACGTTACTCCTGGTGTCCGCGCAGCGCGTTTACCGCCGGCGCGC
CGCGCAACAAGCACACTTCGGGGACCGCATATCACTCCGAGGGGTCACGC
CAACGTTACTCCTGGTGTCCCCCAACATAGCCCCCTTTTCACATGGTTCA
CGGCGCTCCGCCCCCCACAAGGCAGCTGGCTCGCCCCCTCGTCACCCCCT
CTCAATGACGACCCCCCTCCCCCCCCCCCCCCCCCCCCTTCCCCCCCCTG
CAGAACTCGCCAGGGGGCCGCAAGCCCGCGATACCCCCCGAGAAGCTGCC
CGGCGAGGGCGCGGTGGTCGCGCTGGACGCCGAGTTTGTGTGCCTGGAGA
TGGAGGAGGTGCGGCTGCGCAGCGACGGGTCGCGCGTCGTCACCAAGCCC
GCGCGCCAGGGGCTCGCGCGTGTGTCCGTGGTGGACGCGGAGGGGCAGGT
ACGTATGTAGGCAACTGCAGGGGGGGGGGGGGGGGGTTCACGATGTGAAA
GCGCCAGATACTTATGACTTGCCCTCATTTGACAGGCACCTGCGCTACAG
GGGGTCACGATATAAGAGCGCTCAACATAGGAGTGGTCACGATCAAGAGC
GGTCTGAGGGCTGGACACAGATCTGGTCGACACAAGAGCGGTTCGGTGCT
GCTCACGGCTGACCACGTTTACATCGGCAGGTATGTACGGTAACCAGGAT
TTTTCCGCAGCAGCTCTGCCCGCCCGCGTGCGCGCGTGACACGGCGGCGA
TTCGTCCCGCCATGTCTCAGCGCGCCGTCGCTGCAGCCGACTGCGCGTAC
TCGATGGCACACGTGCGCGCGCCGCCTTTGGACGATTACTGTCGGTGTTC
CAGCATGTTCATACCACGATCATCGTGCACGCGCCTCCACGTAGAGCGCG
ATGCAGCTACCGTGCAGAGCACTGTCGATCAAGCTACCATGCTAGTTCAT
AACCACGTCAGGTACACAATCTGACCACAGGTACTTGACGGCCGTGCGCC
CTCCCCCCCCCCCGCCCCCCCTTCCCCCCCGCGCGCGCGCCCGCGCCGCG
CAGGTCATCATCGACGACTACATAATCCAGACGGAGCCAGTGCTCGACCA
CCTGACGCGCTTCAGCGGCGTCGTCGCGGAGGACCTCAATCCGTTCCTCT
CGCAGCGGCCGAGCCTCGTGCCGCTGCGCGCCGCGTACCTCAAGCTGCGC
TGCCTCGTGGACCGCGGCTGCGTGCTGGTCGGGCACGGCCTCGCCAAGGT
GAGCGCTGCTGCTGCTGCTGAGCTTGGATACTTCAAGCGGCGCGTGCTTG
AAGTTCGAGCGGCGAGCGTACGCCGCCGAGGGGCGCGCAGGCGTGAACTC
GTTGCTGGCGGTCACTTTCTGCTAGCTCACTCACAAGTGTACGAGTAGAT
AACGCAGGGGTTTGAGGGACACGGCCTCGCCAAGGTGAGCGCTGCTGCTG
CTGCCGAGCTTAAAACTTCAAGCAGCGCACACTTGAAGTTGAGCGGCGCG
CATGCCGCTGAGGTGCGCGCAGGCGTGAACCCGTTGCTGGCGGTGGCTTC
CGCAAGCTCACTCACAAGCGTGCAAGTTATTATAAGACTTGGGGTTTGAG
CGTGTCTGATGACTTCAAGCGGCGCAAAGTTCAGTGGCATGCACATCTTT
CACAGCACACAAAAAAAAAACGCCGCCGTTTCACACGCGTCCTGAGTTCT
AGTTGGAACGACTCGGCTCCATTAGCATTCATTTGTGGCAGAGACGGAAG
GCGTTATTCGAGGTGAGCGTGGCGCAGAGGTGCACAACGGCGCGTGTTGG
CGACGGCTGTGTTGCGCAGCAGTGATGACTGTGTGAATTATGCAGGTAGG
CGCGGTGTATAGATGTCATGCTCCCTCAAGCGCCCCGCGCCCCCAAAGGC
CATGTGTTTCAGACTCGCAGCGTCACGTGCAGCGCATGTGAGCGCACTGC
GCCTGTGCTTTTATACGCGTGCGACAGTGACGATAGCGCCTGCTGCATGT
TGGAAGCGTTTGAGCATAGAGCAGTTGCCTGCGTGATCTCCACATCGATT
TTTTTAGTGGCGGGGGGGGGGGGGGGGGGGGGGGCGGGGGCTCTGGTTGT
TGTGGCTAGAAGCATGGTTGTGCGAGGCACGGGGAACCCATTTTTGTGAT
GAGAGTCCAGCTGACATTGGGATTTCAGTGAAAGCCTTTTGCATCCCTCA
CATTTCGTGTTGCACCTAAATCCACACAACATGCCCCCCTTAGGCTTAGC
AGTAGGGTTAGGGCTACAGTCAGCTAAACCCCCAACTAACCCTAGCCTAC
ATGACTGTGCTCATTTGTTGAAGACAGCCCAACAGGCTGGTCCGCGCGCT
CTGGGGCGCGCATTCGCAACTGCAACAATGTTGTTGCGCCGTTACCGACA
CGCCGAACGGCATCATTCTCACCTTCACGATGCCTCATCTGCGTAGAGTG
CTTTGCACTTTGCCTTGCAGTTCGGCGCACGACCCAGCGCGCGCTGGCCC
TCGTGCAGCCCTAGCAGTGCCTCTCGTGCAGCGGTAGCACTGCGTCATGA
CATCGGCAACTGACACATGCATCGTTGCCTGCGCGCGTGTGCACTGTTGC
TTGCGACGACAGGACCTCCGCGTCATCAACCTGGTGGTGCCGCCGTCGCA
GGTGCTCGACACGGCGGAAATGTGGAGCTTGCCGGGGCGACGAAAGGCAA
GCAATCTGCTGAACAATGCTACTGTGTGGCAGGCATTGGTGGCACTGCAG
TGGCTTCTGTATGACGCTTTAGGCAGCAGCTCAGTACGGCGGCGTCGTCA
TGCGTGCCTGCATCCTCTGTGGTTGCGAGGCAGCCCTTTCACCATGTGTG
TGTGCTGCCACAGCGAGCTGCGCATCGCCACGTGTGCATTTCCACGTAAT
CTTGCGACGGCCACGCTGGCCAACCATGAATGACTTGTTTGTGCACTGGT
GTGCCGCCATCGGGCTGCTGCAGCATGACGTTCGCAGCGCGCTGCATGCG
TATTATGCATATTGTGTCCTGTCCTTTAGCGGCTGGCCGGCAAGCCGGTC
TGTACGTCCATAATCACGAGCACTGTCGCGCTGCGTGGCCTACGCTAATG
TCACTGCACGGCTGCCCGCTGCTGTTTCTGCCACCTGTCGCGTTCGCGTG
CGACAGGCAAGCCTGCGCTTCCTGAGCCACTACCTTCTGTCGGAGCGCAT
ACAGGAGAGCACGCACGACTCCGTCGAAGACAGCCGCATGGCGCTTGCGC
TGTGCCAGAAGTACGAGGTCAGTTGTCGCCACCTCCTTTGCAAGACCCAA
GTACGTCAGTCTTGACAGGCACAGACTCGTCGTGAACGACACGTGCTTCA
TCTCTTTGCATAGCGCTGTGCATTTCTGCGCCTGACGGTCAGGGCGGTCG
CTGACTGACTGCTGAGCGCTCTCAGCGTGCTCAACTGCACTGCGCAGAAC
ATGTGCACGGGGGGGGGTGGGGGTCTTGCTGACGTCAGTGGCGCTTAAAG
CCGCGCTGAACCCGTTGTTCTCGCGCGCCGCCACCTCCTTGCATCATTGC
CAATGAGCTCCTGCAACTCGCCCTGTGTCTCATGGTAGTAAGCATGCAGG
GCATGTTGGCGGGTGCGCTGTCCCTGTCAGTGGCAAAAGGAGGCCTTTCC
ACAATTTTCTGCGTTGCAAGCTCACTGTCTGGCAGTTTGAATCTGACGAG
ACGCTGCGCTCGCAAACGCGCGGTCGAGCAACCGCCACGTCCTGTCGCCC
ACGCGTCCTGCATGCAGAGAACCCTTGCCGTGATCTGCCTGGCAGCCAAG
GCTCTGCTGCAGCTGCGCCTAGCGTCGCTGGCCTGCGCCGTTCAACAACT
TCAAGCAATGGCAACAACTGCAAGCGATGGCGCTGCGCTGCTGCTTCTCC
GCAAAGACTTCTCATGCACTTCCACGCGCCCGCTTCCCACTCGCCCTGCG
CGCAGAAACTCAAGGCGCAGGGCAGCGATGCGCTCGCGCGCGCCCTCGAC
GACTTGTACCAGTACGGCTACTCGGTAGAGTGGAAGGTTCGAGACATGGG
GCCGGCCGCGGACGTTCGCGTGAGCGCTCCAGGATCAGCCGACACTTGAG
TCGTGAGAGACGAGTCGGTGGGCCGCTGTGAAGCTTGCGTGGGCACCGGT
GCCGCGCTGCACGTAATGTACCGCCGACACGGCCCTCGCG
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Coding sequence (CDS) from alignment at Contig_224:6976..14265-

>mRNA_18026 ID=mRNA_18026|Name=jgi.p|Trimin1|44829|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1176bp|location=Sequence derived from alignment at Contig_224:6976..14265- (Tribonema minus UTEX_B_3156 )
ATGGGCGGCGGCAGCGAGTGGCGGTATACAGACGACGCGACAGCCGTGGC
AGCAGATGCCACTGCGGCGGGGACGCGCTACAAGCTGTTTGCCGTCATCA
GCCACGTGGCGCCGCCGCGCGGCGGCGCCGCGGAGGCGGAGGGCGCGCCG
CAGGGGCACCTGGTGCTGCACGTGCGCGACTCCACGGCCGCTGGTGGCGG
CGACGACGCTGAGAGTAGCAGCCAGGCGGATGCCGCGGGCGATGGCGGCT
GGCTCATCTTCAATGACATGCTGTCGCAGAGGACCTTTCTGGACGACGTG
CGCGGGTTTGGGCCGGCGTGGAAGAACCCCTGCATCCTGCTGTACCGCGA
CGAGAGCGAGGGCCGCCTGCCGGCCAAACTCTGCGAGCAGCCGCCGCCCG
CGCTTGCCATGCCGCCGGCGGTGTTCTCCATACCGTCGTTTGCGCAGAAC
TCGCCAGGGGGCCGCAAGCCCGCGATACCCCCCGAGAAGCTGCCCGGCGA
GGGCGCGGTGGTCGCGCTGGACGCCGAGTTTGTGTGCCTGGAGATGGAGG
AGGTGCGGCTGCGCAGCGACGGGTCGCGCGTCGTCACCAAGCCCGCGCGC
CAGGGGCTCGCGCGTGTGTCCGTGGTGGACGCGGAGGGGCAGGTCATCAT
CGACGACTACATAATCCAGACGGAGCCAGTGCTCGACCACCTGACGCGCT
TCAGCGGCGTCGTCGCGGAGGACCTCAATCCGTTCCTCTCGCAGCGGCCG
AGCCTCGTGCCGCTGCGCGCCGCGTACCTCAAGCTGCGCTGCCTCGTGGA
CCGCGGCTGCGTGCTGGTCGGGCACGGCCTCGCCAAGGACCTCCGCGTCA
TCAACCTGGTGGTGCCGCCGTCGCAGGTGCTCGACACGGCGGAAATGTGG
AGCTTGCCGGGGCGACGAAAGGCAAGCCTGCGCTTCCTGAGCCACTACCT
TCTGTCGGAGCGCATACAGGAGAGCACGCACGACTCCGTCGAAGACAGCC
GCATGGCGCTTGCGCTGTGCCAGAAGTACGAGAAACTCAAGGCGCAGGGC
AGCGATGCGCTCGCGCGCGCCCTCGACGACTTGTACCAGTACGGCTACTC
GGTAGAGTGGAAGGTTCGAGACATGGGGCCGGCCGCGGACGTTCGCGTGA
GCGCTCCAGGATCAGCCGACACTTGA
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