Trimin1|38219|CE38218_85 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|38219
Unique NameTrimin1|38219|CE38218_85
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length141
Homology
BLAST of jgi.p|Trimin1|38219 vs. uniprot
Match: A0A835ZAD7_9STRA (Spinocerebellar ataxia type 10 protein domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAD7_9STRA)

HSP 1 Score: 251 bits (640), Expect = 6.960e-84
Identity = 140/140 (100.00%), Postives = 140/140 (100.00%), Query Frame = 0
Query:    1 AEPRPXXXXXXXXXXXXXXDGGVPHGRKADLVKVIANACHCCRAAQDRVRGAGGVPLVLSHCNIDHASPFLREWGIVAVRNLCEGNAENQACVAKLEKQGEAAATGSAQQHAAASDATRVNRYTGRLEAVGEDEAALNPK 140
            AEPRPXXXXXXXXXXXXXXDGGVPHGRKADLVKVIANACHCCRAAQDRVRGAGGVPLVLSHCNIDHASPFLREWGIVAVRNLCEGNAENQACVAKLEKQGEAAATGSAQQHAAASDATRVNRYTGRLEAVGEDEAALNPK
Sbjct:    1 AEPRPXXXXXXXXXXXXXXDGGVPHGRKADLVKVIANACHCCRAAQDRVRGAGGVPLVLSHCNIDHASPFLREWGIVAVRNLCEGNAENQACVAKLEKQGEAAATGSAQQHAAASDATRVNRYTGRLEAVGEDEAALNPK 140          
BLAST of jgi.p|Trimin1|38219 vs. uniprot
Match: D8LJX9_ECTSI (Atx10homo_assoc domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJX9_ECTSI)

HSP 1 Score: 109 bits (273), Expect = 3.520e-25
Identity = 49/81 (60.49%), Postives = 63/81 (77.78%), Query Frame = 0
Query:   20 DGGVPHGRKADLVKVIANACHCCRAAQDRVRGAGGVPLVLSHCNIDHASPFLREWGIVAVRNLCEGNAENQACVAKLEKQG 100
            DG VP GRK +L+KVI NAC  CR +QD VR  GG+PLVL+HC +D A+P LRE+ ++A+RNLCEGNA NQA ++ L+ QG
Sbjct:  511 DGAVPAGRKVELLKVIGNACFRCRRSQDLVREEGGLPLVLNHCKVDEANPLLREYALLALRNLCEGNAANQASISSLQPQG 591          
BLAST of jgi.p|Trimin1|38219 vs. uniprot
Match: A0A6H5L010_9PHAE (Atx10homo_assoc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L010_9PHAE)

HSP 1 Score: 105 bits (262), Expect = 1.190e-23
Identity = 48/80 (60.00%), Postives = 60/80 (75.00%), Query Frame = 0
Query:   21 GGVPHGRKADLVKVIANACHCCRAAQDRVRGAGGVPLVLSHCNIDHASPFLREWGIVAVRNLCEGNAENQACVAKLEKQG 100
            G VP GRK +L+KVI NAC  CR +QD VR  GG+PLVL+HC +D  +P LRE+ ++AVRNLCEGN  NQA +A L+ QG
Sbjct:  732 GAVPAGRKVELLKVIGNACFRCRRSQDLVREEGGLPLVLNHCAVDETNPLLREYALLAVRNLCEGNPANQASIASLQPQG 811          
BLAST of jgi.p|Trimin1|38219 vs. uniprot
Match: C3YS27_BRAFL (Ataxin-10 (Fragment) n=1 Tax=Branchiostoma floridae TaxID=7739 RepID=C3YS27_BRAFL)

HSP 1 Score: 88.6 bits (218), Expect = 4.030e-20
Identity = 37/76 (48.68%), Postives = 53/76 (69.74%), Query Frame = 0
Query:   25 HGRKADLVKVIANACHCCRAAQDRVRGAGGVPLVLSHCNIDHASPFLREWGIVAVRNLCEGNAENQACVAKLEKQG 100
            HG K DL++++ N C    + QD+VR   G+PL+L HCNID  +P++ +W I  +RNLCEGN +NQA +A LE +G
Sbjct:    7 HGLKRDLIRLLGNMCFQNTSNQDKVRELEGIPLILDHCNIDDHNPYISQWAIFTIRNLCEGNHDNQAVIAGLEDKG 82          
BLAST of jgi.p|Trimin1|38219 vs. uniprot
Match: A0A7S2RDR4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RDR4_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 9.330e-20
Identity = 40/79 (50.63%), Postives = 55/79 (69.62%), Query Frame = 0
Query:   22 GVPHGRKADLVKVIANACHCCRAAQDRVRGAGGVPLVLSHCNIDHASPFLREWGIVAVRNLCEGNAENQACVAKLEKQG 100
            G+P GRK +LV+++AN C   + +Q+ +R  GG+P +LSHCNID  +  LREWG+ AVRN+  GN ENQ  +  LE QG
Sbjct:   20 GLPVGRKVELVRLVANMCFHGQRSQNEIRDLGGLPSLLSHCNIDGENMLLREWGVFAVRNITSGNVENQQFIRDLELQG 98          
BLAST of jgi.p|Trimin1|38219 vs. uniprot
Match: UPI0018D7FF51 (ataxin-10-like n=1 Tax=Patiria miniata TaxID=46514 RepID=UPI0018D7FF51)

HSP 1 Score: 90.9 bits (224), Expect = 1.330e-18
Identity = 38/75 (50.67%), Postives = 54/75 (72.00%), Query Frame = 0
Query:   26 GRKADLVKVIANACHCCRAAQDRVRGAGGVPLVLSHCNIDHASPFLREWGIVAVRNLCEGNAENQACVAKLEKQG 100
            G K DLV++I N CH   A QD+VR   G+P++L  CNID ++PF+ +W I A+RNLC+GN +NQA +A++  QG
Sbjct:  406 GFKRDLVRLIGNMCHSHTANQDKVRELHGIPVILEQCNIDDSNPFISQWAIFAIRNLCDGNLQNQAVIAEMSNQG 480          
BLAST of jgi.p|Trimin1|38219 vs. uniprot
Match: F0W2U1_9STRA (Uncharacterized protein AlNc14C11G1321 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W2U1_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.340e-18
Identity = 39/77 (50.65%), Postives = 55/77 (71.43%), Query Frame = 0
Query:   23 VPHGRKADLVKVIANACHCCRAAQDRVRGAGGVPLVLSHCNIDHASPFLREWGIVAVRNLCEGNAENQACVAKLEKQ 99
            VP G ++ ++ VI N C+  R  QD +R  GG+PLVL+HC ID  +P +REW +VA+RN+CE NAENQ  +A L++Q
Sbjct:  423 VPPGYRSHMIAVIGNLCYRARVHQDLLRRLGGIPLVLNHCIIDERNPLIREWSLVAIRNICEDNAENQQFIASLKQQ 499          
BLAST of jgi.p|Trimin1|38219 vs. uniprot
Match: A0A8B7ZSI3_ACAPL (Ataxin-10 n=1 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZSI3_ACAPL)

HSP 1 Score: 89.0 bits (219), Expect = 4.100e-18
Identity = 37/75 (49.33%), Postives = 55/75 (73.33%), Query Frame = 0
Query:   26 GRKADLVKVIANACHCCRAAQDRVRGAGGVPLVLSHCNIDHASPFLREWGIVAVRNLCEGNAENQACVAKLEKQG 100
            G K DLV++I N CH   A Q+++R   G+P++L HC+ID ++PF+ +W I A+RNLC+GN ENQA +A++  QG
Sbjct:  292 GFKRDLVRLIGNMCHNYTANQNKIRELHGIPVLLEHCSIDDSNPFISQWAIFALRNLCDGNLENQAVIAEMSNQG 366          
BLAST of jgi.p|Trimin1|38219 vs. uniprot
Match: A0A024GS17_9STRA (Atx10homo_assoc domain-containing protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GS17_9STRA)

HSP 1 Score: 89.0 bits (219), Expect = 6.290e-18
Identity = 39/76 (51.32%), Postives = 54/76 (71.05%), Query Frame = 0
Query:   24 PHGRKADLVKVIANACHCCRAAQDRVRGAGGVPLVLSHCNIDHASPFLREWGIVAVRNLCEGNAENQACVAKLEKQ 99
            P G ++ ++ VI N C+  R  QD +R  GG+PLVL+HC ID  +P +REW +VAVRN+CE NAENQ  +A L++Q
Sbjct:  424 PSGYRSHIIAVIGNICYRSRNHQDLLRQLGGIPLVLNHCIIDERNPLIREWSLVAVRNICEDNAENQKFIASLKQQ 499          
BLAST of jgi.p|Trimin1|38219 vs. uniprot
Match: A0A8B7ZWA4_ACAPL (Ataxin-10 n=2 Tax=Acanthaster planci TaxID=133434 RepID=A0A8B7ZWA4_ACAPL)

HSP 1 Score: 89.0 bits (219), Expect = 6.350e-18
Identity = 37/75 (49.33%), Postives = 55/75 (73.33%), Query Frame = 0
Query:   26 GRKADLVKVIANACHCCRAAQDRVRGAGGVPLVLSHCNIDHASPFLREWGIVAVRNLCEGNAENQACVAKLEKQG 100
            G K DLV++I N CH   A Q+++R   G+P++L HC+ID ++PF+ +W I A+RNLC+GN ENQA +A++  QG
Sbjct:  404 GFKRDLVRLIGNMCHNYTANQNKIRELHGIPVLLEHCSIDDSNPFISQWAIFALRNLCDGNLENQAVIAEMSNQG 478          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|38219 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835ZAD7_9STRA6.960e-84100.00Spinocerebellar ataxia type 10 protein domain-cont... [more]
D8LJX9_ECTSI3.520e-2560.49Atx10homo_assoc domain-containing protein n=1 Tax=... [more]
A0A6H5L010_9PHAE1.190e-2360.00Atx10homo_assoc domain-containing protein n=1 Tax=... [more]
C3YS27_BRAFL4.030e-2048.68Ataxin-10 (Fragment) n=1 Tax=Branchiostoma florida... [more]
A0A7S2RDR4_9STRA9.330e-2050.63Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
UPI0018D7FF511.330e-1850.67ataxin-10-like n=1 Tax=Patiria miniata TaxID=46514... [more]
F0W2U1_9STRA1.340e-1850.65Uncharacterized protein AlNc14C11G1321 n=1 Tax=Alb... [more]
A0A8B7ZSI3_ACAPL4.100e-1849.33Ataxin-10 n=1 Tax=Acanthaster planci TaxID=133434 ... [more]
A0A024GS17_9STRA6.290e-1851.32Atx10homo_assoc domain-containing protein n=1 Tax=... [more]
A0A8B7ZWA4_ACAPL6.350e-1849.33Ataxin-10 n=2 Tax=Acanthaster planci TaxID=133434 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 24..100
e-value: 8.8E-7
score: 30.7
IPR019156Ataxin-10 domainPFAMPF09759Atx10homo_assoccoord: 28..102
e-value: 5.2E-29
score: 100.1
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..26
NoneNo IPR availablePANTHERPTHR13255ATAXIN-10coord: 3..108
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 32..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_2contigContig_2:1843821..1845578 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|38219mRNA_864Tribonema minus UTEX_B_3156 mRNAContig_2 1843807..1845578 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|38219|CE38218_85 ID=Trimin1|38219|CE38218_85|Name=jgi.p|Trimin1|38219|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=141bp
AEPRPPPPPPRSAADGGGGDGGVPHGRKADLVKVIANACHCCRAAQDRVR
GAGGVPLVLSHCNIDHASPFLREWGIVAVRNLCEGNAENQACVAKLEKQG
EAAATGSAQQHAAASDATRVNRYTGRLEAVGEDEAALNPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR019156Ataxin-10_domain
IPR016024ARM-type_fold