Trimin1|36602|CE36601_329 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|36602
Unique NameTrimin1|36602|CE36601_329
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length102
Homology
BLAST of jgi.p|Trimin1|36602 vs. uniprot
Match: A0A836CIL9_9STRA (Thioredoxin-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CIL9_9STRA)

HSP 1 Score: 199 bits (505), Expect = 1.530e-64
Identity = 101/101 (100.00%), Postives = 101/101 (100.00%), Query Frame = 0
Query:    1 MDAQIKAKVASTPVVIYSKSYCPYCAKAKRALQAIKAHFEAIELDQVSNGAEIQQALKGVTGSSTVPQVFVGGKYIGGGDDTARKQQNGELVQLVTAAGGL 101
            MDAQIKAKVASTPVVIYSKSYCPYCAKAKRALQAIKAHFEAIELDQVSNGAEIQQALKGVTGSSTVPQVFVGGKYIGGGDDTARKQQNGELVQLVTAAGGL
Sbjct:    1 MDAQIKAKVASTPVVIYSKSYCPYCAKAKRALQAIKAHFEAIELDQVSNGAEIQQALKGVTGSSTVPQVFVGGKYIGGGDDTARKQQNGELVQLVTAAGGL 101          
BLAST of jgi.p|Trimin1|36602 vs. uniprot
Match: D8LC00_ECTSI (Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC00_ECTSI)

HSP 1 Score: 112 bits (279), Expect = 4.690e-30
Identity = 52/97 (53.61%), Postives = 70/97 (72.16%), Query Frame = 0
Query:    5 IKAKVASTPVVIYSKSYCPYCAKAKRALQAIKAHFEAIELDQVSNGAEIQQALKGVTGSSTVPQVFVGGKYIGGGDDTARKQQNGELVQLVTAAGGL 101
            +   V    VV+YSK+YCP+C KAK+AL+ + A +E IELD+V NG+ IQ AL+ +TG  +VP VF+GG  IGGGDDT R Q++GEL+  VTA G +
Sbjct:    8 VNEMVGQHGVVVYSKTYCPFCTKAKKALKDVGAKYELIELDEVDNGSAIQDALQSITGQRSVPNVFIGGTSIGGGDDTVRLQKSGELLTKVTAVGAV 104          
BLAST of jgi.p|Trimin1|36602 vs. uniprot
Match: A0A2V0NRF1_9CHLO (Glutaredoxin domain-containing protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0NRF1_9CHLO)

HSP 1 Score: 108 bits (270), Expect = 1.030e-28
Identity = 52/100 (52.00%), Postives = 69/100 (69.00%), Query Frame = 0
Query:    2 DAQIKAKVASTPVVIYSKSYCPYCAKAKRALQAIKAHFEAIELDQVSNGAEIQQALKGVTGSSTVPQVFVGGKYIGGGDDTARKQQNGELVQLVTAAGGL 101
             A +K  + +  VV++SK+YCPYC KAKRALQ +  +F  +ELDQ  +G  IQ AL  +TG+ +VP+VFV GK+IGGGDDTA K  +GEL  L+   G L
Sbjct:    3 SAFVKDTIKANKVVVFSKTYCPYCVKAKRALQQLTTNFHVVELDQRGDGDAIQDALLDLTGARSVPRVFVAGKFIGGGDDTAAKAASGELKTLLADVGAL 102          
BLAST of jgi.p|Trimin1|36602 vs. uniprot
Match: UPI0009019487 (glutaredoxin-C6-like n=2 Tax=Ipomoea TaxID=4119 RepID=UPI0009019487)

HSP 1 Score: 107 bits (268), Expect = 2.340e-28
Identity = 55/100 (55.00%), Postives = 68/100 (68.00%), Query Frame = 0
Query:    2 DAQIKAKVASTPVVIYSKSYCPYCAKAKRALQAIKAHFEAIELDQVSNGAEIQQALKGVTGSSTVPQVFVGGKYIGGGDDTARKQQNGELVQLVTAAGGL 101
             A+ K  VAS PVV++SKSYCP+C   K+ L  + A F+AIELD  S+G+EIQ AL   TG  TVP VF+GGK+IGG D T    Q G+LV L+T AG L
Sbjct:    3 SAKAKEIVASNPVVVFSKSYCPFCVDVKKLLTQLGASFKAIELDTESDGSEIQSALAEWTGQRTVPNVFIGGKHIGGCDKTIAVNQEGKLVPLLTEAGAL 102          
BLAST of jgi.p|Trimin1|36602 vs. uniprot
Match: H3G9V5_PHYRM (Glutaredoxin domain-containing protein n=20 Tax=Phytophthora TaxID=4783 RepID=H3G9V5_PHYRM)

HSP 1 Score: 107 bits (267), Expect = 3.130e-28
Identity = 49/97 (50.52%), Postives = 70/97 (72.16%), Query Frame = 0
Query:    5 IKAKVASTPVVIYSKSYCPYCAKAKRALQAIKAHFEAIELDQVSNGAEIQQALKGVTGSSTVPQVFVGGKYIGGGDDTARKQQNGELVQLVTAAGGL 101
            ++A++A++PVV+YSKSYCPYC K K  L  + A FE +ELDQ++ G+E Q AL+ +TG STVP VFVGG+ IGG  D  +  ++G+L  L+  +G L
Sbjct:    8 VEAQIAASPVVVYSKSYCPYCTKTKTLLTELGAKFEVVELDQINGGSEQQDALEDLTGQSTVPNVFVGGQSIGGNSDVRKLHKSGDLEPLLKHSGAL 104          
BLAST of jgi.p|Trimin1|36602 vs. uniprot
Match: UPI0002657DC2 (glutaredoxin n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002657DC2)

HSP 1 Score: 107 bits (268), Expect = 3.710e-28
Identity = 50/97 (51.55%), Postives = 70/97 (72.16%), Query Frame = 0
Query:    3 AQIKAKVASTPVVIYSKSYCPYCAKAKRALQAIKAHFEAIELDQVSNGAEIQQALKGVTGSSTVPQVFVGGKYIGGGDDTARKQQNGELVQLVTAAG 99
            A +  K+ ++P+V++SK+ CPYC KAKR L+  KA ++ IEL+Q  +G  IQ  LKG+TG+ +VP+VF+GGK IGGGDDTAR    G+L  L+  AG
Sbjct:   19 AFVNQKITASPLVVFSKTTCPYCDKAKRILEKYKAQYDLIELNQREDGQAIQDVLKGITGARSVPRVFIGGKCIGGGDDTARLDSEGKLESLLKEAG 115          
BLAST of jgi.p|Trimin1|36602 vs. uniprot
Match: F6GSM3_VITVI (Glutaredoxin domain-containing protein n=2 Tax=Vitis TaxID=3603 RepID=F6GSM3_VITVI)

HSP 1 Score: 107 bits (268), Expect = 3.930e-28
Identity = 53/99 (53.54%), Postives = 70/99 (70.71%), Query Frame = 0
Query:    3 AQIKAKVASTPVVIYSKSYCPYCAKAKRALQAIKAHFEAIELDQVSNGAEIQQALKGVTGSSTVPQVFVGGKYIGGGDDTARKQQNGELVQLVTAAGGL 101
            A+ K  V+STPVV++SK+YC YC + K+ L  +KA  + IELDQ S+GAEIQ AL+  TG STVP VF+GGK++GG D    K Q G+LV L+  AG +
Sbjct:   19 AKAKEIVSSTPVVVFSKTYCGYCKRVKQLLSQLKATHKTIELDQESDGAEIQSALREWTGQSTVPNVFIGGKHMGGCDSVMEKHQEGKLVPLLKEAGAI 117          
BLAST of jgi.p|Trimin1|36602 vs. uniprot
Match: A0A6F9DEC3_9ASCI (Monothiol glutaredoxin-S6-like n=1 Tax=Phallusia mammillata TaxID=59560 RepID=A0A6F9DEC3_9ASCI)

HSP 1 Score: 106 bits (265), Expect = 5.470e-28
Identity = 47/94 (50.00%), Postives = 69/94 (73.40%), Query Frame = 0
Query:    2 DAQIKAKVASTPVVIYSKSYCPYCAKAKRALQAIKAHFEAIELDQVSNGAEIQQALKGVTGSSTVPQVFVGGKYIGGGDDTARKQQNGELVQLV 95
            D +IKA +    +V+YSK+YCPYC  AK AL+ + A F+AIELD++++GA+ Q AL+ +TG  +VPQVF+GGKY+GGG D  +   +G+L  +V
Sbjct:    5 DQKIKAAINGDKIVMYSKTYCPYCKMAKSALKGVNATFKAIELDEMNDGADYQNALQAITGVRSVPQVFIGGKYVGGGTDMKKLHDSGKLATMV 98          
BLAST of jgi.p|Trimin1|36602 vs. uniprot
Match: H3G8S4_PHYRM (Glutaredoxin domain-containing protein n=5 Tax=Phytophthora TaxID=4783 RepID=H3G8S4_PHYRM)

HSP 1 Score: 106 bits (265), Expect = 6.310e-28
Identity = 50/97 (51.55%), Postives = 68/97 (70.10%), Query Frame = 0
Query:    5 IKAKVASTPVVIYSKSYCPYCAKAKRALQAIKAHFEAIELDQVSNGAEIQQALKGVTGSSTVPQVFVGGKYIGGGDDTARKQQNGELVQLVTAAGGL 101
            ++AK+A++PVV+YSKSYCPYCAK K  L  + A ++ IELDQ++ G+E Q AL+ ++G STVP VFVGGK IGG  D  +  + G L  L+   G L
Sbjct:    8 VEAKIAASPVVVYSKSYCPYCAKTKTLLTQLGAKYDVIELDQIAGGSEQQDALEQISGQSTVPNVFVGGKSIGGNSDVQKLHKAGNLESLLEQNGAL 104          
BLAST of jgi.p|Trimin1|36602 vs. uniprot
Match: A0A068U1P0_COFCA (Glutaredoxin domain-containing protein n=3 Tax=Coffea TaxID=13442 RepID=A0A068U1P0_COFCA)

HSP 1 Score: 106 bits (265), Expect = 6.880e-28
Identity = 53/98 (54.08%), Postives = 71/98 (72.45%), Query Frame = 0
Query:    6 KAK--VASTPVVIYSKSYCPYCAKAKRALQAIKAHFEAIELDQVSNGAEIQQALKGVTGSSTVPQVFVGGKYIGGGDDTARKQQNGELVQLVTAAGGL 101
            KAK  V++ PVV++SKSYCP+C   K+ L  + A+F+A+ELD  S+G+EIQ AL  +TG  TVP VF+GGK+IGG D T    QNG+LV L+T AG +
Sbjct:    5 KAKEIVSANPVVVFSKSYCPFCVNVKKLLGQVGANFKAVELDVESDGSEIQAALAELTGQKTVPNVFIGGKHIGGCDATTALHQNGKLVPLLTEAGAV 102          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|36602 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CIL9_9STRA1.530e-64100.00Thioredoxin-like protein n=1 Tax=Tribonema minus T... [more]
D8LC00_ECTSI4.690e-3053.61Glutaredoxin n=2 Tax=Ectocarpus TaxID=2879 RepID=D... [more]
A0A2V0NRF1_9CHLO1.030e-2852.00Glutaredoxin domain-containing protein n=1 Tax=Rap... [more]
UPI00090194872.340e-2855.00glutaredoxin-C6-like n=2 Tax=Ipomoea TaxID=4119 Re... [more]
H3G9V5_PHYRM3.130e-2850.52Glutaredoxin domain-containing protein n=20 Tax=Ph... [more]
UPI0002657DC23.710e-2851.55glutaredoxin n=1 Tax=Galendromus occidentalis TaxI... [more]
F6GSM3_VITVI3.930e-2853.54Glutaredoxin domain-containing protein n=2 Tax=Vit... [more]
A0A6F9DEC3_9ASCI5.470e-2850.00Monothiol glutaredoxin-S6-like n=1 Tax=Phallusia m... [more]
H3G8S4_PHYRM6.310e-2851.55Glutaredoxin domain-containing protein n=5 Tax=Phy... [more]
A0A068U1P0_COFCA6.880e-2854.08Glutaredoxin domain-containing protein n=3 Tax=Cof... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014025Glutaredoxin subgroupPRINTSPR00160GLUTAREDOXINcoord: 14..32
score: 48.25
coord: 59..72
score: 49.4
coord: 73..86
score: 38.39
NoneNo IPR availableGENE3D3.40.30.10Glutaredoxincoord: 1..101
e-value: 2.3E-36
score: 125.9
NoneNo IPR availablePIRSRPIRSR005894-2PIRSR005894-2coord: 4..98
e-value: 1.0E-13
score: 48.1
NoneNo IPR availablePIRSRPIRSR001488-1PIRSR001488-1coord: 5..42
e-value: 0.15
score: 8.5
NoneNo IPR availablePANTHERPTHR45694GLUTAREDOXIN 2coord: 5..94
NoneNo IPR availablePANTHERPTHR45694:SF18GLUTAREDOXIN 2coord: 5..94
NoneNo IPR availablePROSITEPS51354GLUTAREDOXIN_2coord: 2..101
score: 24.70982
NoneNo IPR availableCDDcd03419GRX_GRXh_1_2_likecoord: 13..94
e-value: 7.16309E-41
score: 127.656
IPR011899Glutaredoxin, eukaryotic/virialTIGRFAMTIGR02180TIGR02180coord: 14..94
e-value: 2.9E-30
score: 102.3
IPR002109GlutaredoxinPFAMPF00462Glutaredoxincoord: 14..76
e-value: 3.4E-21
score: 75.2
IPR011767Glutaredoxin active sitePROSITEPS00195GLUTAREDOXIN_1coord: 16..32
IPR036249Thioredoxin-like superfamilySUPERFAMILY52833Thioredoxin-likecoord: 4..99

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_196contigContig_196:113900..114825 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|36602mRNA_16244Tribonema minus UTEX_B_3156 mRNAContig_196 113853..114874 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|36602|CE36601_329 ID=Trimin1|36602|CE36601_329|Name=jgi.p|Trimin1|36602|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=102bp
MDAQIKAKVASTPVVIYSKSYCPYCAKAKRALQAIKAHFEAIELDQVSNG
AEIQQALKGVTGSSTVPQVFVGGKYIGGGDDTARKQQNGELVQLVTAAGG
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014025Glutaredoxin_subgr
IPR011899Glutaredoxin_euk/vir
IPR002109Glutaredoxin
IPR011767GLR_AS
IPR036249Thioredoxin-like_sf