Trimin1|35794|CE35793_48 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|35794
Unique NameTrimin1|35794|CE35793_48
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length86
Homology
BLAST of jgi.p|Trimin1|35794 vs. uniprot
Match: A0A836CII7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CII7_9STRA)

HSP 1 Score: 168 bits (426), Expect = 5.430e-53
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
Query:    1 MKKRDTVDKLMTAVQRELPLVYTAMVAERDAYMAEAVAQYLKQTGMKDCCMVVGMAHMSGIERNLKLKYGFSAAAPACELVAQPA 85
            MKKRDTVDKLMTAVQRELPLVYTAMVAERDAYMAEAVAQYLKQTGMKDCCMVVGMAHMSGIERNLKLKYGFSAAAPACELVAQPA
Sbjct:    1 MKKRDTVDKLMTAVQRELPLVYTAMVAERDAYMAEAVAQYLKQTGMKDCCMVVGMAHMSGIERNLKLKYGFSAAAPACELVAQPA 85          
BLAST of jgi.p|Trimin1|35794 vs. uniprot
Match: A0A6U5EEF9_9STRA (Hypothetical protein n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5EEF9_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.920e-9
Identity = 31/71 (43.66%), Postives = 48/71 (67.61%), Query Frame = 0
Query:    1 MKKRDTVDKLMTAVQRELPLVYTAMVAERDAYMA---EAVAQYLKQTGMKDCCMVVGMAHMSGIERNLKLK 68
            +K R+ V  +M ++++ELP +YTA+VAERD YMA   + + +     GMK+   V+GMAH+ G+ER L+ K
Sbjct:  321 LKTRENVRSIMNSLKKELPELYTALVAERDEYMANGLDIIGKNGASRGMKNAVAVMGMAHLDGVERYLQSK 391          
BLAST of jgi.p|Trimin1|35794 vs. uniprot
Match: A0A7S2WTZ5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTZ5_9STRA)

HSP 1 Score: 60.1 bits (144), Expect = 4.150e-9
Identity = 34/68 (50.00%), Postives = 43/68 (63.24%), Query Frame = 0
Query:    1 MKKRDTVDKLMTAVQRELPLVYTAMVAERDAYMAEAVAQYLKQTGMKDCCMVVGMAHMSGIERNLKLK 68
            +K+RDTV +L T ++RE PL+Y AM+ ERD YMA++    L  T       VVGMAHM GIE  L  K
Sbjct:  119 IKERDTVRQLTTELRREAPLIYDAMIGERDRYMAQS----LLGTSAAVTVGVVGMAHMDGIEAQLGWK 182          
BLAST of jgi.p|Trimin1|35794 vs. uniprot
Match: A0A7S0ADP1_9STRA (Hypothetical protein n=1 Tax=Minutocellus polymorphus TaxID=265543 RepID=A0A7S0ADP1_9STRA)

HSP 1 Score: 53.5 bits (127), Expect = 3.160e-7
Identity = 33/80 (41.25%), Postives = 46/80 (57.50%), Query Frame = 0
Query:    1 MKKRDTVDKLMTAVQRELPLVYTAMVAERDAYMAEAVAQYLKQTGMKDCCMVVGMAHMSGIERNLKLKYGFSAAAPACEL 80
            +K RD V  +M  ++   P +Y AMVAERDAYMA  +    K         VVG+AH+ GIE NLK + G++  +  C+L
Sbjct:   34 IKARDNVRLVMVKLRETAPELYNAMVAERDAYMANGID---KLDQFDKMVAVVGIAHVDGIETNLKER-GWAPVSIPCQL 109          
BLAST of jgi.p|Trimin1|35794 vs. uniprot
Match: K0STV5_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0STV5_THAOC)

HSP 1 Score: 55.8 bits (133), Expect = 3.940e-7
Identity = 30/65 (46.15%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    1 MKKRDTVDKLMTAVQRELPLVYTAMVAERDAYMAEAVAQY---LKQTGMKDCCMVVGMAHMSGIE 62
            MK ++ V  +M A+++  P +YTAMVAERD YMA  + Q    L    +   C VVGMAH+ GIE
Sbjct:  344 MKAKENVKVIMGALKKSAPEIYTAMVAERDEYMANGLDQLDATLAGKKIDSTCAVVGMAHVDGIE 408          
BLAST of jgi.p|Trimin1|35794 vs. uniprot
Match: L1JJY4_GUITC (Uncharacterized protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1JJY4_GUITC)

HSP 1 Score: 54.7 bits (130), Expect = 4.890e-7
Identity = 31/65 (47.69%), Postives = 42/65 (64.62%), Query Frame = 0
Query:    1 MKKRDTVDKLMTAVQRELPLVYTAMVAERDAYMAEAVAQYLKQTGMKDCCMVVGMAHMSGIERNL 65
            +K+R TV  +M  ++  LP VYTA++ ERD YMA ++   LK  G +    VVGMAHM GIE +L
Sbjct:  128 LKERRTVRGIMQTLKENLPEVYTALIGERDQYMANSL---LKANG-RTTVAVVGMAHMDGIEAHL 188          
BLAST of jgi.p|Trimin1|35794 vs. uniprot
Match: A0A497RQC0_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Altiarchaeales archaeon TaxID=2250256 RepID=A0A497RQC0_9ARCH)

HSP 1 Score: 50.4 bits (119), Expect = 2.730e-5
Identity = 22/63 (34.92%), Postives = 40/63 (63.49%), Query Frame = 0
Query:    3 KRDTVDKLMTAVQRELPLVYTAMVAERDAYMAEAVAQYLKQTGMKDCCMVVGMAHMSGIERNL 65
            + + ++K+MT +++ LP +Y+A+V ERD YMA  + +  ++   +D   +VG  H  GI+R L
Sbjct:  161 REENIEKIMTELKKSLPALYSALVDERDRYMAYMLLRLQEKHPREDIMAIVGAGHEKGIKRYL 223          
BLAST of jgi.p|Trimin1|35794 vs. uniprot
Match: A0A1Z5J846_FISSO (Uncharacterized protein n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5J846_FISSO)

HSP 1 Score: 50.4 bits (119), Expect = 3.120e-5
Identity = 32/79 (40.51%), Postives = 47/79 (59.49%), Query Frame = 0
Query:    1 MKKRDTVDKLMTAVQRELPLVYTAMVAERDAYMAEAVAQYLKQTGMKDCCM-VVGMAHMSGIERNLKLKYGFSAAAPAC 78
            MK R+ V  +MT ++   P +   M+ ERDAYMA  +   L Q    +C + V+G+AHM G+E NLK + G++  AP C
Sbjct:  334 MKNRENVRAIMTELKEVAPALAQVMLTERDAYMATGI-DTLNQF---ECIVAVMGIAHMDGVENNLKGR-GWTQVAPNC 407          
BLAST of jgi.p|Trimin1|35794 vs. uniprot
Match: A0A835Z3X3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3X3_9STRA)

HSP 1 Score: 50.1 bits (118), Expect = 4.440e-5
Identity = 24/57 (42.11%), Postives = 38/57 (66.67%), Query Frame = 0
Query:   16 RELPLVYTAMVAERDAYMAEAVAQYLKQTGMKDCCMVVGMAHMSGIERNLKLKYGFS 72
            ++ P  ++A++ ERDAYMA+++A  L+Q   K   MVVG AH  GI  +L+ K+ F+
Sbjct:  346 KKAPGFFSAVIEERDAYMADSIAHCLEQRHSKSTVMVVGAAHQPGIVGHLQEKHRFT 402          
BLAST of jgi.p|Trimin1|35794 vs. uniprot
Match: A0A7S0E6G0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E6G0_9EUKA)

HSP 1 Score: 47.4 bits (111), Expect = 6.390e-5
Identity = 27/62 (43.55%), Postives = 40/62 (64.52%), Query Frame = 0
Query:    1 MKKRDTVDKLMTAVQRELPLVYTAMVAERDAYMAEAVAQYLKQTGMKDCCMVVGMAHMSGIE 62
            +K+R+ V  L T +  E+P +Y A++AERDAYMA ++   L   G +    VVG+AH+ GIE
Sbjct:   35 LKQRENVRALSTYMMSEVPPLYDALIAERDAYMARSL---LGAEGTR-VVAVVGLAHVDGIE 92          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|35794 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A836CII7_9STRA5.430e-53100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A6U5EEF9_9STRA1.920e-943.66Hypothetical protein n=2 Tax=Corethron hystrix Tax... [more]
A0A7S2WTZ5_9STRA4.150e-950.00Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S0ADP1_9STRA3.160e-741.25Hypothetical protein n=1 Tax=Minutocellus polymorp... [more]
K0STV5_THAOC3.940e-746.15Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
L1JJY4_GUITC4.890e-747.69Uncharacterized protein n=1 Tax=Guillardia theta (... [more]
A0A497RQC0_9ARCH2.730e-534.92Uncharacterized protein n=1 Tax=Candidatus Altiarc... [more]
A0A1Z5J846_FISSO3.120e-540.51Uncharacterized protein n=1 Tax=Fistulifera solari... [more]
A0A835Z3X3_9STRA4.440e-542.11Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S0E6G0_9EUKA6.390e-543.55Hypothetical protein (Fragment) n=1 Tax=Phaeocysti... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002816TraB/PrgY/GumN familyPFAMPF01963TraB_PrgY_gumNcoord: 8..67
e-value: 7.6E-9
score: 35.8

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_190contigContig_190:83405..83662 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|35794mRNA_17149Tribonema minus UTEX_B_3156 mRNAContig_190 83388..85071 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|35794|CE35793_48 ID=Trimin1|35794|CE35793_48|Name=jgi.p|Trimin1|35794|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=86bp
MKKRDTVDKLMTAVQRELPLVYTAMVAERDAYMAEAVAQYLKQTGMKDCC
MVVGMAHMSGIERNLKLKYGFSAAAPACELVAQPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002816TraB/PrgY/GumN_fam