Trimin1|354366|estExt_Genemark1.C_Ctg_2350003 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354366
Unique NameTrimin1|354366|estExt_Genemark1.C_Ctg_2350003
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length121
Homology
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BLAST of jgi.p|Trimin1|354366 vs. uniprot
Match: A0A835Z4A6_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4A6_9STRA)

HSP 1 Score: 134 bits (337), Expect = 2.370e-38
Identity = 120/120 (100.00%), Postives = 120/120 (100.00%), Query Frame = 0 
Query:    1 MKAGEGGERCGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDLDRXXXXXXXXXXRSAVPCAEHRAQGAAAARMRSTGGGSGRRCSLRESDWESVMQRCRSAVARMPLRGGRLSS 120
            MKAGEGGERCGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDLDRXXXXXXXXXXRSAVPCAEHRAQGAAAARMRSTGGGSGRRCSLRESDWESVMQRCRSAVARMPLRGGRLSS
Sbjct:    1 MKAGEGGERCGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGDLDRXXXXXXXXXXRSAVPCAEHRAQGAAAARMRSTGGGSGRRCSLRESDWESVMQRCRSAVARMPLRGGRLSS 120
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354366 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835Z4A6_9STRA2.370e-38100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 69..92

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_235contigContig_235:10189..10551 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354366mRNA_17935Tribonema minus UTEX_B_3156 mRNAContig_235 10035..10560 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354366|estExt_Genemark1.C_Ctg_2350003 ID=Trimin1|354366|estExt_Genemark1.C_Ctg_2350003|Name=jgi.p|Trimin1|354366|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=121bp
MKAGEGGERCGSGSGSSGGGGDGSGCGCVGSPAAASAAPVSHMHIGDLDR
SSAAAAAAAARSAVPCAEHRAQGAAAARMRSTGGGSGRRCSLRESDWESV
MQRCRSAVARMPLRGGRLSS*
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