Trimin1|354363|estExt_Genemark1.C_Ctg_2340017 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354363
Unique NameTrimin1|354363|estExt_Genemark1.C_Ctg_2340017
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length163
Homology
BLAST of jgi.p|Trimin1|354363 vs. uniprot
Match: A0A835YZP5_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZP5_9STRA)

HSP 1 Score: 301 bits (771), Expect = 3.820e-103
Identity = 162/162 (100.00%), Postives = 162/162 (100.00%), Query Frame = 0
Query:    1 MASKLSEADSGSSSADTEGAALPAAASENAATTEAEVQHREPLVKVTHLSESHAGTSLIARVVALSGCCYVWVGEGDWAGSGKGGRLPEQGAVAAAVQTPYEAMPVVTELLGEEGGFGGGMAQRLAKRTGQMVYASVNVSNAAAESLPMIERRVLAVLQGAG 162
            MASKLSEADSGSSSADTEGAALPAAASENAATTEAEVQHREPLVKVTHLSESHAGTSLIARVVALSGCCYVWVGEGDWAGSGKGGRLPEQGAVAAAVQTPYEAMPVVTELLGEEGGFGGGMAQRLAKRTGQMVYASVNVSNAAAESLPMIERRVLAVLQGAG
Sbjct:    1 MASKLSEADSGSSSADTEGAALPAAASENAATTEAEVQHREPLVKVTHLSESHAGTSLIARVVALSGCCYVWVGEGDWAGSGKGGRLPEQGAVAAAVQTPYEAMPVVTELLGEEGGFGGGMAQRLAKRTGQMVYASVNVSNAAAESLPMIERRVLAVLQGAG 162          
BLAST of jgi.p|Trimin1|354363 vs. uniprot
Match: UPI0014031681 (proteasome assembly chaperone 4 n=1 Tax=Petromyzon marinus TaxID=7757 RepID=UPI0014031681)

HSP 1 Score: 57.8 bits (138), Expect = 2.170e-7
Identity = 36/94 (38.30%), Postives = 55/94 (58.51%), Query Frame = 0
Query:   63 VALSGCCYVWVGE-GDWAGSGKGGRLPEQGAVAAAVQTPYEAMPVVTELLGEEG-GFGGGMAQRLAKRTGQMVYASVNVSNAAAESLPMIERRV 154
            ++L G   +W+GE GD          P   A+A A+ T  + MP+ + LLG+   GF   +AQRLAKRTG+ V+ASVN+      SL ++E+++
Sbjct:   77 ISLPGSLLLWLGERGD----------PRLSALAVALATRLDTMPIGSSLLGDHAEGFSCALAQRLAKRTGKQVFASVNLPGLDPASLALLEQQL 160          
BLAST of jgi.p|Trimin1|354363 vs. uniprot
Match: UPI000D1CF3A4 (proteasome assembly chaperone 4-like n=2 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1CF3A4)

HSP 1 Score: 53.9 bits (128), Expect = 2.240e-6
Identity = 40/120 (33.33%), Postives = 60/120 (50.00%), Query Frame = 0
Query:   45 KVTHLSESHAGTSLIARVVALSGCCYVWVGEGDWAGSGKGGRLPEQGAVAAAVQTPYEAMPVVTELLGEEGG--FGGGMAQRLAKRTGQMVYASVNVSNAAAESLPMIERRVLAVLQGAG 162
            ++T  S+     S   +++ L    Y+W+G           RL   G + A++ TPY+ MP ++ L+G  G    GGG+A+RLA RTG  V  + N+ + A       ERRVL  LQ  G
Sbjct:    5 RLTCFSDEAHDASFHFQILCLDKQLYIWIGCNS-------ARL---GHLFASIPTPYDKMPSLSALIGGGGANSAGGGIARRLALRTGYSVVLAANLPSNAPSLEGFAERRVLKELQDLG 114          
BLAST of jgi.p|Trimin1|354363 vs. uniprot
Match: A0A1B6KZT8_9HEMI (Uncharacterized protein n=1 Tax=Graphocephala atropunctata TaxID=36148 RepID=A0A1B6KZT8_9HEMI)

HSP 1 Score: 51.2 bits (121), Expect = 3.100e-5
Identity = 29/106 (27.36%), Postives = 55/106 (51.89%), Query Frame = 0
Query:   35 AEVQHREPLVKVTHLSESHAGTSLIARVVALSGCCYVWVGEGDWAGSGKGGRLPEQGAVAAAVQTPYEAMPVVTELLGEEGG-FGGGMAQRLAKRTGQMVYASVNV 139
            A+++  +  +     SE+   T ++  V+ L    ++W+G G         + P    +  A++TPYE++P+ T++LG        G+A +LAKR  + V+ SVN+
Sbjct:   11 AQIESTDSRLSTHSFSENIGSTVVMFSVLKLKDSAFMWIGSG---------QEPRLVNMCVAMKTPYESLPLTTQVLGSRSDEMSPGLASQLAKRLSKPVFVSVNI 107          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354363 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A835YZP5_9STRA3.820e-103100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
UPI00140316812.170e-738.30proteasome assembly chaperone 4 n=1 Tax=Petromyzon... [more]
UPI000D1CF3A42.240e-633.33proteasome assembly chaperone 4-like n=2 Tax=Selag... [more]
A0A1B6KZT8_9HEMI3.100e-527.36Uncharacterized protein n=1 Tax=Graphocephala atro... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032157Proteasome assembly chaperone 4PFAMPF16093PAC4coord: 58..139
e-value: 7.2E-13
score: 48.5
IPR032157Proteasome assembly chaperone 4PANTHERPTHR33559PROTEASOME ASSEMBLY CHAPERONE 4coord: 32..159
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..39
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..17

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_234contigContig_234:133144..137545 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354363mRNA_18267Tribonema minus UTEX_B_3156 mRNAContig_234 133028..137598 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354363|estExt_Genemark1.C_Ctg_2340017 ID=Trimin1|354363|estExt_Genemark1.C_Ctg_2340017|Name=jgi.p|Trimin1|354363|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=163bp
MASKLSEADSGSSSADTEGAALPAAASENAATTEAEVQHREPLVKVTHLS
ESHAGTSLIARVVALSGCCYVWVGEGDWAGSGKGGRLPEQGAVAAAVQTP
YEAMPVVTELLGEEGGFGGGMAQRLAKRTGQMVYASVNVSNAAAESLPMI
ERRVLAVLQGAG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032157PAC4