Trimin1|354354|estExt_Genemark1.C_Ctg_2330005 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|354354
Unique Name	Trimin1\|354354\|estExt_Genemark1.C_Ctg_2330005
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	79

Homology

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BLAST of jgi.p|Trimin1|354354 vs. uniprot
Match: A0A836CGA3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGA3_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.500e-51
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 0

Query:    1 MRGLLLTAALWWRCLQVSERDLWEGMLVCTCMLVRLPLQVAEKSGAMMKVRSPSSPRGAALVLMPITRFLVQLPPWSC 78
            MRGLLLTAALWWRCLQVSERDLWEGMLVCTCMLVRLPLQVAEKSGAMMKVRSPSSPRGAALVLMPITRFLVQLPPWSC
Sbjct:    1 MRGLLLTAALWWRCLQVSERDLWEGMLVCTCMLVRLPLQVAEKSGAMMKVRSPSSPRGAALVLMPITRFLVQLPPWSC 78

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354354 vs. uniprot

BLAST of jgi.p|Trimin1|354354 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A836CGA3_9STRA	4.500e-51	100.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_233	contig	Contig_233:35479..35715 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354354	mRNA_17626	Tribonema minus UTEX_B_3156	mRNA	Contig_233 35459..36327 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|354354|estExt_Genemark1.C_Ctg_2330005 ID=Trimin1|354354|estExt_Genemark1.C_Ctg_2330005|Name=jgi.p|Trimin1|354354|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=79bp
MRGLLLTAALWWRCLQVSERDLWEGMLVCTCMLVRLPLQVAEKSGAMMKV
RSPSSPRGAALVLMPITRFLVQLPPWSC*