mRNA_17626 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354354
Unique NamemRNA_17626
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
BLAST of jgi.p|Trimin1|354354 vs. uniprot
Match: A0A836CGA3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CGA3_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.420e-50
Identity = 78/78 (100.00%), Postives = 78/78 (100.00%), Query Frame = 3
Query:  135 MRGLLLTAALWWRCLQVSERDLWEGMLVCTCMLVRLPLQVAEKSGAMMKVRSPSSPRGAALVLMPITRFLVQLPPWSC 368
            MRGLLLTAALWWRCLQVSERDLWEGMLVCTCMLVRLPLQVAEKSGAMMKVRSPSSPRGAALVLMPITRFLVQLPPWSC
Sbjct:    1 MRGLLLTAALWWRCLQVSERDLWEGMLVCTCMLVRLPLQVAEKSGAMMKVRSPSSPRGAALVLMPITRFLVQLPPWSC 78          
BLAST of jgi.p|Trimin1|354354 vs. uniprot
Match: A0A835Z272_9STRA (YT521-B-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z272_9STRA)

HSP 1 Score: 1536 bits (3976), Expect = 0.000e+0
Identity = 873/873 (100.00%), Postives = 873/873 (100.00%), Query Frame = 1
Query:    1 MAMASAYEGINLQFEFEDHYLHQMDLDKMPICKWGAACQARPNCLYRHIEDEEKTECIFYTQGFCRHGPGCRFKHTKLTAEECPMEADFTLVQRSTLRRDDAPHRPGFGGGFSGDQRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDAPXXXXXXXXXXXXREVQGGXXXXXXXXXXXXXFQARPRGSRGARPPRPSTIIGLLPKAEAQELEARLPEQLKSAPAVRYFVVKSPSFDSLATSAAFGVWSVLRHHTPMLNAAFASGDLVVLLFTVVRSEQFQGYAFMASDVEEALGGGAWSPPLSAXXXXXXXXXXXFKVQWQHLCELPFTTIVGLENAMDDNIQVVRARDGAEIAPPMGRMVLLQMHKADAVDLPESGIAPELALDLAAAQALDDEGQGPQFPVPPQQPGFMFVTGGGHLDEVLQKFIFGMSDHQAAEAARHIRPGLFCFLYDATAGFLFGVFEMASPLTARIDPGYCADGGRAHELHPRHGGKYSTGGGHMEEDVGEDPEMPFGGGGVQVNCVIEVPPIHRSDPELEAILPNEKNFKQGPLNRDQVQRLATLLAVKGGKTMHHQPPPPMPMASPPLGPMPPLGEDIMPRLPAEEGWYHPPEPFHEKVFVELTASEEFVNIRRIVDMSGGGNXXXXXXXXXXXVRVXLRGQGSGSLEGPLRVEAPEPLHVVISSNNEGKVHHAAREFVGLLGALQAEQMDMLHRQGRGLRRGNAGRGRRGGQVCAGVQAVAVHCVADARGLRAGVLEAPAVGAGSALNALGAAAAPFLIATDVTPAAIKRVSDDKSSGREIHDSRAPAPPLALGCSRGAQSSALSAQEHAHRIQEAGSCMRRKLTTADECPDANGQ 2619
            MAMASAYEGINLQFEFEDHYLHQMDLDKMPICKWGAACQARPNCLYRHIEDEEKTECIFYTQGFCRHGPGCRFKHTKLTAEECPMEADFTLVQRSTLRRDDAPHRPGFGGGFSGDQRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDAPXXXXXXXXXXXXREVQGGXXXXXXXXXXXXXFQARPRGSRGARPPRPSTIIGLLPKAEAQELEARLPEQLKSAPAVRYFVVKSPSFDSLATSAAFGVWSVLRHHTPMLNAAFASGDLVVLLFTVVRSEQFQGYAFMASDVEEALGGGAWSPPLSAXXXXXXXXXXXFKVQWQHLCELPFTTIVGLENAMDDNIQVVRARDGAEIAPPMGRMVLLQMHKADAVDLPESGIAPELALDLAAAQALDDEGQGPQFPVPPQQPGFMFVTGGGHLDEVLQKFIFGMSDHQAAEAARHIRPGLFCFLYDATAGFLFGVFEMASPLTARIDPGYCADGGRAHELHPRHGGKYSTGGGHMEEDVGEDPEMPFGGGGVQVNCVIEVPPIHRSDPELEAILPNEKNFKQGPLNRDQVQRLATLLAVKGGKTMHHQPPPPMPMASPPLGPMPPLGEDIMPRLPAEEGWYHPPEPFHEKVFVELTASEEFVNIRRIVDMSGGGNXXXXXXXXXXXVRVXLRGQGSGSLEGPLRVEAPEPLHVVISSNNEGKVHHAAREFVGLLGALQAEQMDMLHRQGRGLRRGNAGRGRRGGQVCAGVQAVAVHCVADARGLRAGVLEAPAVGAGSALNALGAAAAPFLIATDVTPAAIKRVSDDKSSGREIHDSRAPAPPLALGCSRGAQSSALSAQEHAHRIQEAGSCMRRKLTTADECPDANGQ
Sbjct:    1 MAMASAYEGINLQFEFEDHYLHQMDLDKMPICKWGAACQARPNCLYRHIEDEEKTECIFYTQGFCRHGPGCRFKHTKLTAEECPMEADFTLVQRSTLRRDDAPHRPGFGGGFSGDQRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDAPXXXXXXXXXXXXREVQGGXXXXXXXXXXXXXFQARPRGSRGARPPRPSTIIGLLPKAEAQELEARLPEQLKSAPAVRYFVVKSPSFDSLATSAAFGVWSVLRHHTPMLNAAFASGDLVVLLFTVVRSEQFQGYAFMASDVEEALGGGAWSPPLSAXXXXXXXXXXXFKVQWQHLCELPFTTIVGLENAMDDNIQVVRARDGAEIAPPMGRMVLLQMHKADAVDLPESGIAPELALDLAAAQALDDEGQGPQFPVPPQQPGFMFVTGGGHLDEVLQKFIFGMSDHQAAEAARHIRPGLFCFLYDATAGFLFGVFEMASPLTARIDPGYCADGGRAHELHPRHGGKYSTGGGHMEEDVGEDPEMPFGGGGVQVNCVIEVPPIHRSDPELEAILPNEKNFKQGPLNRDQVQRLATLLAVKGGKTMHHQPPPPMPMASPPLGPMPPLGEDIMPRLPAEEGWYHPPEPFHEKVFVELTASEEFVNIRRIVDMSGGGNXXXXXXXXXXXVRVXLRGQGSGSLEGPLRVEAPEPLHVVISSNNEGKVHHAAREFVGLLGALQAEQMDMLHRQGRGLRRGNAGRGRRGGQVCAGVQAVAVHCVADARGLRAGVLEAPAVGAGSALNALGAAAAPFLIATDVTPAAIKRVSDDKSSGREIHDSRAPAPPLALGCSRGAQSSALSAQEHAHRIQEAGSCMRRKLTTADECPDANGQ 873          
BLAST of jgi.p|Trimin1|354354 vs. uniprot
Match: A0A8K1FJ65_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FJ65_PYTOL)

HSP 1 Score: 189 bits (479), Expect = 4.130e-46
Identity = 201/735 (27.35%), Postives = 292/735 (39.73%), Query Frame = 1
Query:   58 YLHQMDLDKMPICKWGAACQARPNCLYRHIEDEEKTECIFYTQGFCRHGPGCRFKHTKLTAEECPMEADFTLVQRSTLRRDDAPHRPGFGGGFSGDQRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDAPXXXXXXXXXXXXREVQGGXXXXXXXXXXXXXFQARPRGSRGARPPRPSTIIGLLPKAEAQELEARLPEQLKSAPAVRYFVVKSPSFDSLATSAAFGVWSVLRHHTPMLNAAFASGDLVVLLFTVVRSEQFQGYAFMA------------SDVEEAL------GGGAWSPPLSAXXXXXXXXXXXFKVQWQHLCELPFTTIVGLENAMDDNIQVVRARDGAEIAPPMGRMVL--------LQMHKADAVD---LPESGIAPELALDLAAAQALDDEGQGPQFPVPPQQPGFMFVTGGGHLDEVLQKFIFGMSDHQAAEAARHIRPGLFCFLYDATAGFLFGVFEMASPLTARIDPGYCADGGRAHELHPRHGGKYSTGGGHMEEDVGEDPEMPFGGGGVQVNCVIEVPPIHRSDPELEAILPNEKNFKQGPLNRDQVQRLATLLAVKGGKTMHHQPPP----------------PMPMASPPLGPMPPLGEDIMPRLPAEEGWYHPPEP-----FHEKVFVELTASEEFVNIRRIVDMSGGGNXXXXXXXXXXXVRVXLRGQGSGSLEGPLRVEAPEPLHVVISSNNE 2112
            +LHQ D+ KMP C+WG  CQ  P C +RH+ DEE+ EC FY QGFC HGP CR++H KL  EECP  ADF+L  +     +               +R++                                             DA             R     XXXXXXXXXXXXX     +G   A P  P  ++              LP++ K     +YF+V S S+ ++A    F  WS+ R     L  A  + D V L FTV  S+ FQG A +              D+  +L        GAWS                F ++W  +CE P+  ++  EN    N+ V    +G E+ P +G+ ++        +Q+H     D   LP  G A ELA     A      G  P++ V    PGF+F     ++DEV  + + G+     A A + I PG   FL +     + GVFE  SP    + PG  + G +                        +   +P     V+    +  P I+ ++P+++AI   ++  + GPL     QRLA + + +    M +QPPP                    A+   GP PP       R P+  G     +P     F EK+ V +    EF   RRI+   GG +            ++ +RG+GSGS E     EA EPL +++S+ NE
Sbjct:   64 FLHQYDMSKMPECRWGMECQV-PECPFRHVPDEERVECAFYKQGFCSHGPNCRYRHIKLAREECPETADFSLQSKVADEEN--------------VKRRKAQPVNEFYKIAICKHWEKMGTCPFGDDCHFAHGEKELRPFPKGERDA-------------RHGGPXXXXXXXXXXXXXXGMGASKGPESAAPTGPPPVV--------------LPDEGKFC---KYFIVPSFSYHNVAHGVHFNQWSLPRELQQTLKFASETSDDVFLYFTVSSSKHFQGVARLVPGALIQAGSEEGEDLSMSLVPYQSDNKGAWS--------------GAFGIEWLRICECPWERLMEYEN---QNLAVNECSNGQELEPEVGQAIMRLIFNSPQIQLHYRSVEDEQKLP--GGAEELATRRREAAESIFGGPAPKWKV--TTPGFVFACNHTNIDEVFGRMLMGLGSEHEAVATKSITPGTPLFLVNMADRHILGVFEAISPAVVNLMPGAFSHGPQ------------------------QPSPLPVQ---VRFVVALNAPAINSAEPQIKAIF-GDRGIQVGPLALQATQRLADVFSERCAGPMFNQPPPMNMXXXXXXXXXXXXXXXDQAAAASGP-PPF------RRPSATGSAGSRDPSSSSAFLEKMLVGIEPDNEFGVTRRIIG-PGGSHMKRISQEAGGGAKIKVRGRGSGSKEST-EDEANEPLMIIVSAENE 695          
BLAST of jgi.p|Trimin1|354354 vs. uniprot
Match: D7FPL2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FPL2_ECTSI)

HSP 1 Score: 146 bits (368), Expect = 1.930e-32
Identity = 157/547 (28.70%), Postives = 206/547 (37.66%), Query Frame = 1
Query:   58 YLHQMDLDKMPICKWGAACQARPNCLYRHIEDEEKTECIFYTQGFCRHGPGCRFKHTKLTAEECPMEADFTLVQRSTLRRDDAPHRPGFGGGFSGDQRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDAPXXXXXXXXXXXXREVQGGXXXXXXXXXXXXXFQARPRGSRGARPPRPSTIIGLLPKAEAQELEARLPEQLKSAPAVRYFVVKSPSFDSLATSAAFGVWSVLRHHTPMLNAAFASGDLVVLLFTVVRSEQFQGYAFMASDVEEALGGGAWSPPLSAXXXXXXXXXXXFKVQWQHLCELPFTTIVGLENAMDDNIQVVRARDGAEIAPPMGRMVLLQMHKADAVDLPESGI-----APELALDLAAAQALDDEGQGPQ-------------------------------------------------------------------FPVPPQ---QPGFMFVTGGGHLDEVLQKFIFGMSDHQAAEAARHIRPGLFCFLYDATAGFLFGVFEMASPLTARID 1473
            YLH+MD ++MPIC+W   CQ    C +RH E++E  EC  Y QGFCR GP CRF+H K   E+CP  ADF+L   ++L  + A  R    GGFS     R   XXXXXXXXXXXXXXXXXXX                      P               R+                      +GS G                   ++EA +P  +K     R+FV++S + D+LA SA    W   R +    N+AF         FTV +S  FQG A M S V +                        F V+W  LCELPF+    ++N   DN+ + RA  G EI    GR +   M     +DLP+  +     AP   +  A + A      GP                                                                      VPPQ    PGF+F       DE + K +FG+       A   I+PG   FL+D   G + G+F   S L+ RID
Sbjct:   53 YLHKMDRNRMPICRWRTDCQVE-GCAFRHEEEQEAPECAMYQQGFCRQGPTCRFRHVKRAREDCPEVADFSLANPTSLHSNSAGGRAIPPGGFS-----RSFGXXXXXXXXXXXXXXXXXXXEHAGRYFGKNQMCKYWTSGTKCPWGDACNYAHGEEDPRRD----------------------KGSGGVGGXXXXXXXXRKDPLTDPDIEAIVP--VKDGEKARFFVLRSLNHDNLAVSAVQNKWYARRFNIMPFNSAFDGPGRAFFFFTVNQSNNFQGCAEMTSRVPQM------------GPRTEEEQVMEFSVKWLRLCELPFSVASQVKNPSQDNLPIWRASHGMEIPYEAGRKLCKLMWAQPEIDLPQHVVQQAKDAPFSGVLPARSPASGGNPTGPPGMRXPXNNLVRVGGPPLGGGAPGGVEGVSGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQVPPQFDGPPGFLFEIESEFFDECVGKLLFGLPARLPPHAHDAIQPGNPLFLWDPGNGLVLGIFRAVSGLSERID 557          
BLAST of jgi.p|Trimin1|354354 vs. uniprot
Match: F0W8E6_9STRA (Uncharacterized protein AlNc14C34G3076 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W8E6_9STRA)

HSP 1 Score: 135 bits (341), Expect = 6.400e-29
Identity = 126/497 (25.35%), Postives = 182/497 (36.62%), Query Frame = 1
Query:   58 YLHQMDLDKMPICKWGAACQARPNCLYRHIEDEEKTECIFYTQGFCRHGPGCRFKHTKLTAEECPMEADFTLVQRSTLRRDDAPHRPGFGGGFSGDQRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDAPXXXXXXXXXXXXREVQGGXXXXXXXXXXXXXFQARP-------RGSRGARPPRPSTIIGLLPKAEA---QELEARLPEQLKSAPAVRYFVVKSPSFDSLATSAAFGVWSVLRHHTPMLNAAFASGDLVVLLFTVVRSEQFQGYAFMASDVEEAL---GGGAWSPPLSAXXXXXXXXXXXFKVQWQHLCELPFTTIVGLENAMDDNIQVVRARDGAEIAPPMGRMVL--------LQMHKADAVDLPES-GIAPELALDL--AAAQALDDEGQGPQFPVPPQQPGFMFVTGGGHLDEVLQKFIFGMSDHQAAEAARHIRPGLFCFLYDATAGFLFGVFEMASPLTARIDP 1476
            +LHQ D+ KMP C+WG  CQ  P C +RH+ DE++ EC FY QGFC HGP CR++H KL  EECP  ADF L  +S +  ++   R                                                         R   P             E  G               + RP         S G + P  S    +   +     QE + RLP+  ++     YF++ S S+ ++A S  +  W++       L     S D+V L  TV  S  FQG   +  D+ + L   G    S  +             F V+W  +CE P+      E+     + V  A     +    GR  +        +Q+H     D     G A ELA+    AAA    +      F      PGF+F      +DE   + +FG+     A A +H+ PG   FL + +   L G+FE  SP    + P
Sbjct:   80 FLHQYDMSKMPECRWGMECQV-PECPFRHVPDEDRMECAFYRQGFCSHGPNCRYRHIKLAREECPETADFAL--QSKVAEEENVKR---------------------------------------------------------RKTQPVNEFYKIAICKHWEKLGSCPFGDECHFAHGDQELRPFPRQNERAESVGFQKPGASDTFPINEPSHPIPFQEPQPRLPDADRNC---AYFILHSFSYHNIAHSVHYHQWTLTDSPLQQLREIAGSYDVVFLFITVTSSRHFQGVVRVTKDIIQRLPSCGEDLASGIVPYQTDKRSSWEGVFPVEWLRICECPWEFF---ESIASKYLFVPNAPKLIPLETDQGRKCMHILFSQPQIQLHYKSVEDEQTLIGGAFELAVRRREAAASVYSNPNTLSTFHWRVSAPGFVFACNNLTIDECFGRLLFGLGKDHEAIAKQHVVPGTPLFLLNMSDRHLLGIFEAVSPSVVNMVP 510          
BLAST of jgi.p|Trimin1|354354 vs. uniprot
Match: A0A7S2Q329_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2Q329_9STRA)

HSP 1 Score: 125 bits (315), Expect = 4.690e-26
Identity = 138/585 (23.59%), Postives = 208/585 (35.56%), Query Frame = 1
Query:   58 YLHQMDLDKMPICKWGAACQARPNCLYRHIEDEEKTECIFYTQGFCRHGPGCRFKHTKLTAEECPMEADFTLVQRSTLRRDDAPHRPGFGGGFSGDQRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDAPXXXXXXXXXXXXREVQGGXXXXXXXXXXXXXFQARPRGSRGARPPRPSTIIGLLPKAEAQELEARLPEQLKSAPAVRYFVVKSPSFDSLATSAAFGVWSVLRHHTPMLNAAFASGDLVVLLFTVVRSEQFQGYAFMASDVEEALGGG----AWSPPLSAXXXXXXXXXXXFKVQWQHLCELPFTTIVGLENAMD--------DNIQVVRARDGAEIAPPMGRMVLLQMHK----ADAVDLPESGIAPEL--ALDLAAAQALDDEGQGPQFPVPPQQPGFMFVTGGGHLDEVLQKFIFGMSDHQAAEAARHIRPGLFCFLYDATAGFLFGVFEMASPLTARIDPGYCADGGRAHELHPRHGGKYSTGGGHMEEDVGEDPEMPFGGGGVQVNCVIEVPPIHRSDPELEAILPNEKNFKQGPLNRDQVQRLATLLAVKGG 1758
            +LHQ DL KMP+C+ G  C+ + +C +RHI + ++ EC+FY+QGFC HGP CR+KH +    + P+ ADFTL                   G S  Q  +                                               P             +                 +Q    G       RP+ I+               PE         ++++++ ++   +TS   G W V + H   +N A      V++ FTV  S   QG A + S             + S    A           FK +W   CELP +T   LE A D           Q + ++ G  +   +    L  +++    AD  D  E    P +  A+       L DE   P  P P    GF+F      +DE L + +FG+  H    AA  IRPG   FLY  +   +FGVFE  +     ++P       +A   +P                       PF    ++V   +E  P+   DP L  IL +    + GPL   Q + LA+L+A + G
Sbjct:   89 FLHQYDLSKMPLCRHGDRCKVK-DCPFRHISEADRLECVFYSQGFCIHGPFCRYKHVRRERIDLPLVADFTL-------------------GLSQMQAGKDGVTVRRPAPKPNEFFKVSLCKHFLSGECPFGDGCHFAHGEAEIRRFPKPGQEEKEAPDGEKELSDNMFDNQETTTVDYYQGGQSGGG-----RPTPILE--------------PENAS------FYILRAATYRDCSTSTVKGEWYVQKKHAESINRAANGNRQVMVFFTVGDSHHIQGAALVKSTASYVKSADRKHHSSSKGEMASADKDGPFCYRFKCEWYRTCELPTST--ALEAAPDLLLPTSATQYCQDMTSKTGEAVMKAIWNSPLCTLYESWNSADYDDEGEKAKKPPVGDAILFDFRCPLPDEIAWPTMPTP----GFIFGCNSQTMDECLGRGLFGLPAHMKI-AASGIRPGSSIFLYHVSERLVFGVFEALTTAQMNLEP-------KAFSKNPN------------------ATTSPFPVQ-IRVRISLECAPVQDDDPALNDILRSRVGGRIGPLTVSQAEALASLIAQQCG 595          
BLAST of jgi.p|Trimin1|354354 vs. uniprot
Match: A0A3R7B9A9_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7B9A9_9STRA)

HSP 1 Score: 125 bits (314), Expect = 2.270e-25
Identity = 136/491 (27.70%), Postives = 195/491 (39.71%), Query Frame = 1
Query:   58 YLHQMDLDKMPICKWGAACQARPNCLYRHIEDEEKTECIFYTQGFCRHGPGCRFKHTKLTAEECPMEADFTLVQRSTLRRDDAPHRPGFGGGFSGDQRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDAPXXXXXXXXXXXXREVQGGXXXXXXXXXXXXXFQARPRGSRGARPPRPSTIIGLLPKAEAQELEARLPEQLKSAPAVRYFVVKSPSFDSLATSAAFGVWSVLRHHTPMLNAAFASGDLVVLLFTVVRSEQFQGYAFMASDVEEALGGGAWSPPLSAXXXXXXXXXXXFKVQWQHLCELPFTTIVGLENAMDDNIQVVRARDGAEIAPPMGRMVLLQMHKADAVDL-----PESGIAPELALDLA---------AAQALDDEGQGPQFPVPPQQ----PGFMFVTGGGHLDEVLQKFIFGMSDHQAAEAARHIRPGLFCFLYDATAGFLFGVFEMASPLTARIDP 1476
            +LHQ D+ KMP C+WG  CQ  P C +RH+ DE++ EC FY QGFC HG  CR++H KL+ EECP+ ADF L Q      + A  R          + Q                                             P  P XXXXXXXXXXX          XXXXX    F+A         P  P + +  +P AE                   Y V++S S+ +LA S     ++       ++  A    D V L  +V  S  FQG A +   V+   G  A    L+            F V+W   CE+PF +   +  A D  +   R  DG E+    G  +L +M     + L      + G+ P  A +LA          A  +D     P   V  +     PG++F   G  +DE   + +FG++  Q   A ++++ G   FL + +   + G+FE  S +   I P
Sbjct:   66 FLHQYDMSKMPECRWGMECQV-PECPFRHVPDEDRMECAFYKQGFCSHGAACRYRHVKLSREECPVIADFGL-QSKVAEEESAKRR----------KAQPVNEFFKIAICKHWEKQGSCPFGDECHFAHGDKELRPFPKDGHGGPGGPGXXXXXXXXXXXXXXXX-----XXXXXHVIPFKA---------PDVPPSFV--MPDAEGSST---------------YIVLRSHSYQNLAQSVHHQKFAAAGSTLQLIQDAMTMADQVFLFLSVSPSFHFQGVARI---VQVPTGDDA-GVSLADSTVPFAEWRGDFGVEWLRTCEIPFESADTIPTAKDAALS--RLPDGTELTKECGHALLEKMFFHPMIRLHIKSVEDEGVLPGGAFELANRRRHAAESVANFVDPARLMPSAHVAHRWQVDLPGYVFACNGATIDESFGRMLFGLAKDQEQVAVKNVQVGTPLFLLNMSDRHVLGMFEATSSVGMNIIP 507          
BLAST of jgi.p|Trimin1|354354 vs. uniprot
Match: W4H1Q3_9STRA (Uncharacterized protein n=7 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H1Q3_9STRA)

HSP 1 Score: 124 bits (311), Expect = 2.380e-25
Identity = 135/496 (27.22%), Postives = 193/496 (38.91%), Query Frame = 1
Query:   58 YLHQMDLDKMPICKWGAACQARPNCLYRHIEDEEKTECIFYTQGFCRHGPGCRFKHTKLTAEECPMEADFTLVQR-----STLRRDDAPHRPGFGGGFSGDQRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDAPXXXXXXXXXXXXREVQGGXXXXXXXXXXXXXFQARPRGSRGARPPRPSTIIGLLPKAEAQELEARLPEQLKSAPAVRYFVVKSPSFDSLATSAAFGVWSVLRHHTPMLNAAFASGDLVVLLFTVVRSEQFQGYAFMASDVEEALGGGAWSPPLSAXXXXXXXXXXXFKVQWQHLCELPFTTIVGLENAMDDNIQVVRARDGAEIAPPMGRMVLLQMHKADAVDL-----PESGIAPELALDLA---------AAQALDDEGQGPQFPVPPQQ----PGFMFVTGGGHLDEVLQKFIFGMSDHQAAEAARHIRPGLFCFLYDATAGFLFGVFEMASPLTARIDP 1476
            +LHQ D+ KMP C+WG  CQ  P C +RH+ DE++ EC FY QGFC HG  CR++H KL+ EECP+ ADF L  +     S  RR   P    F                                                      RP  P        XXXX      XXXXXXXXX    F+A         P  P + +  +P AE                   Y V++S S+ +LA S     ++       ++  A    D V L  +V  S  FQG A +   V+   G  A    L+            F V+W   CE+PF +   +  A D  +   R  DG E+    G  +L +M     + L      + G+ P  A +LA          A  +D     P   V  +     PG++F   G  +DE   + +FG++  Q   A ++++ G   FL + +   + G+FE  S +   I P
Sbjct:   66 FLHQYDMSKMPECRWGMECQV-PECPFRHVPDEDRMECAFYKQGFCSHGAACRYRHVKLSREECPVIADFGLQSKVAEEESAKRRKAQPVNEFF-------------------------KIAICKHWEKQGSCPFGDECHFAHGDKELRP-FPKDGHGGPGXXXXXXXXXXXXXXXXXXXHVIPFKA---------PDVPPSFV--MPDAEGSST---------------YIVLRSHSYQNLAQSVHHQKFAAAGSTLQLIQDAMTMADQVFLFLSVSPSFHFQGVARI---VQVPTGDDA-GVSLADSTVPFAEWRGDFGVEWLRTCEIPFESADTIPTAKDAALS--RLPDGTELTKECGHALLEKMFFHPMIRLHIKSVEDEGVLPGGAFELANRRRHAAESVANFVDPARLMPSAHVAHRWQVDLPGYVFACNGATIDESFGRMLFGLAKDQEQVAVKNVQVGTPLFLLNMSDRHVLGMFEATSSVGMNIIP 502          
BLAST of jgi.p|Trimin1|354354 vs. uniprot
Match: A0A425D9Z7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A425D9Z7_9STRA)

HSP 1 Score: 124 bits (311), Expect = 6.700e-25
Identity = 135/496 (27.22%), Postives = 193/496 (38.91%), Query Frame = 1
Query:   58 YLHQMDLDKMPICKWGAACQARPNCLYRHIEDEEKTECIFYTQGFCRHGPGCRFKHTKLTAEECPMEADFTLVQR-----STLRRDDAPHRPGFGGGFSGDQRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDAPXXXXXXXXXXXXREVQGGXXXXXXXXXXXXXFQARPRGSRGARPPRPSTIIGLLPKAEAQELEARLPEQLKSAPAVRYFVVKSPSFDSLATSAAFGVWSVLRHHTPMLNAAFASGDLVVLLFTVVRSEQFQGYAFMASDVEEALGGGAWSPPLSAXXXXXXXXXXXFKVQWQHLCELPFTTIVGLENAMDDNIQVVRARDGAEIAPPMGRMVLLQMHKADAVDL-----PESGIAPELALDLA---------AAQALDDEGQGPQFPVPPQQ----PGFMFVTGGGHLDEVLQKFIFGMSDHQAAEAARHIRPGLFCFLYDATAGFLFGVFEMASPLTARIDP 1476
            +LHQ D+ KMP C+WG  CQ  P C +RH+ DE++ EC FY QGFC HG  CR++H KL+ EECP+ ADF L  +     S  RR   P    F                                                      RP  P        XXXX      XXXXXXXXX    F+A         P  P + +  +P AE                   Y V++S S+ +LA S     ++       ++  A    D V L  +V  S  FQG A +   V+   G  A    L+            F V+W   CE+PF +   +  A D  +   R  DG E+    G  +L +M     + L      + G+ P  A +LA          A  +D     P   V  +     PG++F   G  +DE   + +FG++  Q   A ++++ G   FL + +   + G+FE  S +   I P
Sbjct:   66 FLHQYDMSKMPECRWGMECQV-PECPFRHVPDEDRMECAFYKQGFCSHGAACRYRHVKLSREECPVIADFGLQSKVAEEESAKRRKAQPVNEFF-------------------------KIAICKHWEKQGSCPFGDECHFAHGDKELRP-FPKDGHGGPGXXXXXXXXXXXXXXXXXXXHVIPFKA---------PDVPPSFV--MPDAEGSST---------------YIVLRSHSYQNLAQSVHHQKFAAAGSTLQLIQDAMTMADQVFLFLSVSPSFHFQGVARI---VQVPTGDDA-GVSLADSTVPFAEWRGDFGVEWLRTCEIPFESADTIPTAKDAALS--RLPDGTELTKECGHALLEKMFFHPMIRLHIKSVEDEGVLPGGAFELANRRRHAAESVANFVDPARLMPSAHVAHRWQVDLPGYVFACNGATIDESFGRMLFGLAKDQEQVAVKNVQVGTPLFLLNMSDRHVLGMFEATSSVGMNIIP 502          
BLAST of jgi.p|Trimin1|354354 vs. uniprot
Match: B7GER0_PHATC (Uncharacterized protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GER0_PHATC)

HSP 1 Score: 121 bits (303), Expect = 1.220e-24
Identity = 123/482 (25.52%), Postives = 178/482 (36.93%), Query Frame = 1
Query:   58 YLHQMDLDKMPICKWGAACQARPNCLYRHIEDEEKTECIFYTQGFCRHGPGCRFKHTKLTAEECPMEADFTLVQRSTLRRDDAPHRPGFGGGFSGDQRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDAPXXXXXXXXXXXXREVQGGXXXXXXXXXXXXX-----FQARPRGSRGARPPRPSTIIGLLPKAEAQELEARLPEQLKSAPAVRYFVVKSPSFDSLATSAAFGVWSVLRHHTPMLNAAFASGD-LVVLLFTVVRSEQFQGYAFM-ASDVEEALGGGAWSPPLSAXXXXXXXXXXXFKVQWQHLCELPFTTIVGLENAMDDNIQVVRARDGAEIAPPMGRMVLLQMHKADAVDLPESGIAPELALDLAAAQALDDEGQGPQFPVPPQ--QPGFMFVTGGGHLDEVLQKFIFGMSDHQAAEAARHIRPGLFCFLYDATAGFLFGVFEMASPLTARIDP 1476
            +LHQ DL KMP+C+ G  C+ + +C +RHI +  + EC+FY+QGFC HGP CR+KH +   E+ P  ADFTL         D              ++                                             R D               E  GG                  FQ    G+ G   P P              LE   P+Q K      +++V++ +   LA S     W + R H   +NAA+  G   V++ FTV  S   QG A + A  V +        P                 ++W    ELP  T +G+  A D  +     +   +++   G  ++  +  A  V L ES    +   +     AL  + + P  P  P    PGF+F      +DE L   IFG+  H  A AA  IRPG   FL++ T   LFG+FE  +     I+P
Sbjct:   87 FLHQYDLSKMPLCRHGERCKIK-DCPFRHISEANRMECVFYSQGFCIHGPFCRYKHIRRAREDLPAVADFTLGLSQMQASKDG-------------EKVTKRTAPKPNEFYKISLCKHFLQGSCPFAENCHFAHGESELRKFPRKDE-----------NEEEGDGGDELTDNMFVNQDTTTIDYFQG---GASGGGKPNPI-------------LE---PDQAK------FYIVRAATHHDLAISTVQNEWYLQRKHAQAMNAAYQDGKHQVMIFFTVSDSNHIQGAALLTAPGVYQKSSDNGKDP-----------FCHRISLEWFRTTELPIETALGV--ASDLLLPTSSTQYCQDMSSTTGESLMKAIWNAPLVTLFESWSGEQ---EPPTPDALLTDFRAPTDPAWPTIPGPGFIFGCSSDTMDECLGLGIFGLPSHMKA-AASSIRPGASIFLFNVTDRLLFGIFEALTHAKMNIEP 501          
BLAST of jgi.p|Trimin1|354354 vs. uniprot
Match: W7TJY8_9STRA (Zinc finger, CCCH-type n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TJY8_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.420e-23
Identity = 116/433 (26.79%), Postives = 166/433 (38.34%), Query Frame = 1
Query:   58 YLHQMDLDKMPICKWGAACQARPNCLYRHIEDEEKTECIFYTQGFCRHGPGCRFKHTKLTAEECPMEADFTL-------------VQRSTLRRDDAPHRPG------------FGGGFSGDQR------------QRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRPDAPXXXXXXXXXXXXRE---------------VQGGXXXXXXXXXXXXXFQARPRGSRGARPPRPSTIIGLLPKAEAQELEARLPEQLKSAPAVRYFVVKSPSFDSLATSAAFGVWSVLRHHTPMLNAAFASGDLVVLLFTVVRSEQFQGYAFMASDVEEALGGGAWSPPLSAXXXXXXXXXXXFKVQWQHLCELPFTTIVGLENAMDDNIQVVRARDGAEIAPPMGRMVLLQMHKADAVDLPESGIAPEL 1200
            YLHQ DLD++PIC +G+            + +E+KTEC+FY QGFC +GP CR+KH     E+ P + +F +              +   +  +   + PG            FGGG  G+              Q+                             XXXXXXXXXXXX  RP                                   G              Q +   + G R        GL  K    +L    P+Q +    VR+FV+KS ++ +LA S   GVW   R++   LN AF + D VVL ++V  S  +QG A M S +          PPL             F ++W  L  LPF     L N ++DN+ + R+RD  E+ P +GR +L  ++ +  V L   G    L
Sbjct:   71 YLHQYDLDRVPICPFGSKXXXXXXXXXXXVTEEDKTECVFYRQGFCMYGPFCRYKHVHRNPEDAPEQGEFNISSQKAADEAAAAAAEGGNVSGEGNSYPPGASSGLPGNVVGGFGGGRVGEMAGARGGRAGVVVPQQLQLLSMHQQQSQPQHGAASPFGLASGTGMXXXXXXXXXXXXDRRPGGALERNENYKTTLCNHWLSNKGLCPFGDDCVFAHGETELRKHPLAIAREQQQAHRAGGGRGETDGREGGLGRKIRFPDLGLPWPDQAR----VRFFVIKSLNYKNLAQSVRRGVWRTHRNNERTLNEAFRTCDKVVLFYSVNESGHWQGAAVMTSPIRSQQQP-PHLPPLQMLQHHQDGWTAEFSLEWLRLVSLPFPHTRPLRNPLNDNLPISRSRDCQELTPEIGRQLLYLIYSSSEVSLALGGAEASL 498          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354354 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A836CGA3_9STRA2.420e-50100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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BLAST of jgi.p|Trimin1|354354 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z272_9STRA0.000e+0100.00YT521-B-like domain-containing protein n=1 Tax=Tri... [more]
A0A8K1FJ65_PYTOL4.130e-4627.35Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
D7FPL2_ECTSI1.930e-3228.70Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F0W8E6_9STRA6.400e-2925.35Uncharacterized protein AlNc14C34G3076 n=1 Tax=Alb... [more]
A0A7S2Q329_9STRA4.690e-2623.59Hypothetical protein n=1 Tax=Skeletonema marinoi T... [more]
A0A3R7B9A9_9STRA2.270e-2527.70Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
W4H1Q3_9STRA2.380e-2527.22Uncharacterized protein n=7 Tax=Aphanomyces astaci... [more]
A0A425D9Z7_9STRA6.700e-2527.22Uncharacterized protein n=1 Tax=Aphanomyces astaci... [more]
B7GER0_PHATC1.220e-2425.52Uncharacterized protein n=2 Tax=Phaeodactylum tric... [more]
W7TJY8_9STRA1.420e-2326.79Zinc finger, CCCH-type n=2 Tax=Monodopsidaceae Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_233contigContig_233:35459..36327 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354354|estExt_Genemark1.C_Ctg_2330005
Hectar predicted targeting categorysignal peptide
TranscriptId354676
TrackFilteredModels1
ProteinId354354
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354354gene_17626Tribonema minus UTEX_B_3156 geneContig_233 35459..36327 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_17626_2exon_17626_2Tribonema minus UTEX_B_3156 exonContig_233 35459..35770 -
exon_17626_1exon_17626_1Tribonema minus UTEX_B_3156 exonContig_233 36249..36327 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_17626UTR3_17626Tribonema minus UTEX_B_3156 three_prime_UTRContig_233 35459..35478 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_17626CDS_17626Tribonema minus UTEX_B_3156 CDSContig_233 35479..35715 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR5_17626UTR5_17626Tribonema minus UTEX_B_3156 five_prime_UTRContig_233 36249..36327 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354354Trimin1|354354|estExt_Genemark1.C_Ctg_2330005Tribonema minus UTEX_B_3156 polypeptideContig_233 35479..35715 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_17626 ID=mRNA_17626|Name=jgi.p|Trimin1|354354|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=391bp|location=Sequence derived from alignment at Contig_233:35459..36327- (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGCTGAGTGCTGGTGTTAACGTTGATGGCGAGCTGCCAATAGCGGT
GGCACCGGTGGTGGCGTCGTCTTTCACAGACGCCCGCTCCTAAACTGACG
GGCCTCACCCGTTTCGGGACTCAGTGCTGGTAACATGAGGGGGCTGCTGC
TGACTGCCGCATTGTGGTGGCGGTGCTTGCAAGTATCTGAGCGAGATTTG
TGGGAGGGCATGCTGGTGTGCACCTGCATGCTGGTGCGCCTGCCGCTTCA
AGTGGCTGAAAAATCAGGCGCAATGATGAAGGTGCGGTCACCTTCGTCTC
CACGAGGGGCAGCCCTGGTGTTGATGCCAATAACCCGCTTTCTGGTACAG
TTACCACCATGGTCATGCTGAACTTATCGTGTGCTCAGCCC
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protein sequence of jgi.p|Trimin1|354354

>Trimin1|354354|estExt_Genemark1.C_Ctg_2330005 ID=Trimin1|354354|estExt_Genemark1.C_Ctg_2330005|Name=jgi.p|Trimin1|354354|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=79bp
MRGLLLTAALWWRCLQVSERDLWEGMLVCTCMLVRLPLQVAEKSGAMMKV
RSPSSPRGAALVLMPITRFLVQLPPWSC*
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mRNA from alignment at Contig_233:35459..36327-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_17626 ID=mRNA_17626|Name=jgi.p|Trimin1|354354|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=869bp|location=Sequence derived from alignment at Contig_233:35459..36327- (Tribonema minus UTEX_B_3156 )
ATGCCGCTGAGTGCTGGTGTTAACGTTGATGGCGAGCTGCCAATAGCGGT GGCACCGGTGGTGGCGTCGTCTTTCACAGGTACGTCGCCCTGCTCCAGCC ACGCGATCAACCAGGCCAAGCTGCTCTAGACACTGTTGCCTGTGCTTGCC CAGGTGGCGGTTGCCCAGCACCGCAAACAGAGTGGTTCACAGGCGTATAT TAAACCAGGTATCAAGGCTCGTGCATGCAGATGACATTGTAGAGTGTAAG CATGATTGCAACCAGCGGGCCACACACATGCAACGGTTGCTGAGACACAC ACATGGAGTTGTGCTCCTCAAGCTCACAAATGATTAACAGTATCAAGGCT CGTCATTTCAGTGGCAGAGTATGACTTCCGCACCATCTGCTCACCCGCAA AAGCGCTCCAAGGACATCATTGGCTGCCAGCAAGGACAGGCTGCCTCTCT GGTAGTTGTTGGTGCTGACACCTGTTGCTGCTGTTGGTGGTGGCGATGGT GCTGCTGCTGCTGCTGCTGCTGCTGCTCGCGTATCACCGCCCTGGTTGAC CCGATAGACGCCCGCTCCTAAACTGACGGGCCTCACCCGTTTCGGGACTC AGTGCTGGTAACATGAGGGGGCTGCTGCTGACTGCCGCATTGTGGTGGCG GTGCTTGCAAGTATCTGAGCGAGATTTGTGGGAGGGCATGCTGGTGTGCA CCTGCATGCTGGTGCGCCTGCCGCTTCAAGTGGCTGAAAAATCAGGCGCA ATGATGAAGGTGCGGTCACCTTCGTCTCCACGAGGGGCAGCCCTGGTGTT GATGCCAATAACCCGCTTTCTGGTACAGTTACCACCATGGTCATGCTGAA CTTATCGTGTGCTCAGCCC
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Coding sequence (CDS) from alignment at Contig_233:35459..36327-

>mRNA_17626 ID=mRNA_17626|Name=jgi.p|Trimin1|354354|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=237bp|location=Sequence derived from alignment at Contig_233:35459..36327- (Tribonema minus UTEX_B_3156 )
ATGAGGGGGCTGCTGCTGACTGCCGCATTGTGGTGGCGGTGCTTGCAAGT
ATCTGAGCGAGATTTGTGGGAGGGCATGCTGGTGTGCACCTGCATGCTGG
TGCGCCTGCCGCTTCAAGTGGCTGAAAAATCAGGCGCAATGATGAAGGTG
CGGTCACCTTCGTCTCCACGAGGGGCAGCCCTGGTGTTGATGCCAATAAC
CCGCTTTCTGGTACAGTTACCACCATGGTCATGCTGA
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