Trimin1|354183|estExt_Genemark1.C_Ctg_2150008 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354183
Unique NameTrimin1|354183|estExt_Genemark1.C_Ctg_2150008
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length265
Homology
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A835Z5N8_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5N8_9STRA)

HSP 1 Score: 517 bits (1332), Expect = 2.730e-185
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 0
Query:    1 MPATFSVTFESGPVGIELAEALRSQPCSVIVKSVRAGSKAAADRRIVPGLGVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYPPVAEDTPTATAEGAVSLGTEAPQQPVEQLMVKRLTRARPCGMVSQEGDLIEIRYTARIADTMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSINGVTDETATRDSNYYTGDPCNDEARRAGVASGLCDRLAK 264
            MPATFSVTFESGPVGIELAEALRSQPCSVIVKSVRAGSKAAADRRIVPGLGVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYPPVAEDTPTATAEGAVSLGTEAPQQPVEQLMVKRLTRARPCGMVSQEGDLIEIRYTARIADTMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSINGVTDETATRDSNYYTGDPCNDEARRAGVASGLCDRLAK
Sbjct:    1 MPATFSVTFESGPVGIELAEALRSQPCSVIVKSVRAGSKAAADRRIVPGLGVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYPPVAEDTPTATAEGAVSLGTEAPQQPVEQLMVKRLTRARPCGMVSQEGDLIEIRYTARIADTMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSINGVTDETATRDSNYYTGDPCNDEARRAGVASGLCDRLAK 264          
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: D8LST8_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST8_ECTSI)

HSP 1 Score: 170 bits (430), Expect = 3.630e-46
Identity = 114/281 (40.57%), Postives = 154/281 (54.80%), Query Frame = 0
Query:   27 CSVIVKSVRAGSKAAADRRIVPGLGVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYPPV---------------------------------AEDT-PTATAEGAV-----SLGTEAPQQPVEQLMVKRL-TRARPCGMVSQEGDLIEIRYTARIA-DTMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSA-----LVFGVQLVSINGVTDETATRDSNYYTGDPCNDEARRAGVASGLCDR 261
            C V V  V  GS+A     +  G GV+ VG     +   P EVA+ I+ +P P+ ++F+ P +                                 A DT  +ATA  AV     S+G         +L V ++  +   CG  ++ GDLIE RY+AR+A D   E+D+SD+RGTG PYAI LG GDVV+GLDLSL+DMC+GERR++E+PA LAYG KG+  FGVP +       +VFGV+LVSIN   + +  RD N+YT DPC+  A  AG ASG C +
Sbjct:  201 CRVYVTEVLTGSQAIRQANLRAGFGVAAVGGKPA-ERLEPKEVAELIRLSPRPMEIVFRDPELLGRRLQAEADRKAEAVKRRKQKAAADAASPETAAPDTGDSATATTAVDPRSGSVGNGGGSASSGELRVTQVGKKPEVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSINFSINASDARD-NFYTDDPCDAAAVAAGNASGQCKK 479          
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A1Z5KS47_FISSO (Peptidylprolyl isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS47_FISSO)

HSP 1 Score: 124 bits (312), Expect = 1.300e-30
Identity = 68/173 (39.31%), Postives = 102/173 (58.96%), Query Frame = 0
Query:   64 KSPPEVAKFIKTAPYPLTLIFKYPPVAED------TPTATAEGAVSLGTEAPQQPVEQLMVKR-LTRARPCGMVSQEGDLIEIRYTARIADTMRE-YDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSINGV 228
            +S  +V + ++T PYP+TL F       D      TP  TA+ A+ L  +     +     K  L +   C + S+ GD++EI+Y AR        YD+S++RGTG+PY + LG GD++ G+DL LYDMC GE R +++P  L YG KGN +F VP ++ L + VQL++ING+
Sbjct:   95 ESAAQVQERLRTGPYPVTLKFTNLAAGGDAISDLGTPLVTAQDALRLAQQTATDTITSAYEKTILQKTTKCSLQSRRGDVLEIKYEARFQSPQGPIYDSSERRGTGRPYQMVLGSGDILAGVDLGLYDMCPGEIRTLQIPPPLGYGPKGNKMFRVPPDTTLFWKVQLMTINGM 267          
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A8J6CFR5_DIALT (Peptidylprolyl isomerase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CFR5_DIALT)

HSP 1 Score: 126 bits (317), Expect = 1.350e-29
Identity = 85/234 (36.32%), Postives = 123/234 (52.56%), Query Frame = 0
Query:    6 SVTFESGPVGIELAEALRSQPCSVIVKSVRAGSKAAADRRIV-PGLGVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYPPVAEDTPTATAEGAVSLGTEAPQQPVEQLMVKRLTRARP-CGMVSQEGDLIEIRYTARIAD-TMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSINGVTDETATRD 236
            +V+F +  +G+ LA+   +    V V  +  GS+A  +R  V  G+ ++ +G   +       +V   I  AP P+ L F             A+ AV L  +A +   E+  ++R     P C + S++GD IEI Y  R+AD T R  D+S  RG G P+A+ LG GDV R L+L +YDMCIGE RR+  P  LAYG  GN   GVP N+ +VF V + +IN  TD    R+
Sbjct:  333 TVSFSARSLGLALADVDTADGARVAVSRIVPGSEA--ERTGVRAGVFLTAIGGEQLAPTVRAEDVRATIARAPRPVALTF--------AGALGADEAVGLAAKARRAETERFKLERTREPAPNCAIRSRKGDTIEIEYETRLADATQRVIDSSFMRGIGAPFALQLGNGDVPRALELGIYDMCIGEARRIVAPPRLAYGLAGNRALGVPPNATIVFDVTMSAINFQTDPATRRE 556          
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A7S1V2L7_9STRA (Peptidylprolyl isomerase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V2L7_9STRA)

HSP 1 Score: 119 bits (298), Expect = 1.790e-29
Identity = 72/185 (38.92%), Postives = 106/185 (57.30%), Query Frame = 0
Query:   68 EVAKFIKTAPYPLTLIFKYPPVAEDT------PTATAEGAVSLGTEAPQQPVEQ--------LMVKRLTRARPCGMV-SQEGDLIEIRYTARIADTMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSINGV-TDETATRD 236
            +V   I+  PYP+ L F       D       P  TAE A+ L  +  ++P           +  KR+ +  P  ++ S+ GDL+EI Y+A IA T  EYD+S  RGTGQPY + LG GD++ G+DL LYDM  GE+R++++P  L +G +G   FG+P  S+LV+ V+LV++NG    +  TRD
Sbjct:    5 DVITRIQQGPYPIDLEFLNLAAGGDAFGDMGRPLVTAEDALDLAKKTAEEPSTPPGDTSPAAVYTKRVLKEPPNRILQSRRGDLLEINYSATIAGTDYEYDSSAIRGTGQPYQMVLGSGDMIPGVDLGLYDMSPGEKRQLDIPQTLGHGPRGRKNFGIPEGSSLVWTVELVALNGAFAGDERTRD 189          
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A7S0KXW8_9STRA (Peptidylprolyl isomerase n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KXW8_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.040e-26
Identity = 55/119 (46.22%), Postives = 79/119 (66.39%), Query Frame = 0
Query:  127 CGMVSQEGDLIEIRYTARIADTMRE-YDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSIN--GVTDETATRDSNYYTG 242
            CG+ S+ GD++EI Y AR+A      YD+S++RGTGQPY   LG GDV++G+DL L+DMC GE R +++P+ L YG KG+ LF +P +  L + V+LV +N  G  +   TR+  Y  G
Sbjct:   24 CGIKSRRGDVLEINYEARVASPGGPIYDSSEQRGTGQPYQFVLGNGDVIKGVDLGLFDMCPGEVRELDIPSALGYGRKGSILFDIPGDVRLWWKVELVRLNFVGEGNNAKTREELYDGG 142          
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A6U3U6Q1_9STRA (Peptidylprolyl isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3U6Q1_9STRA)

HSP 1 Score: 109 bits (273), Expect = 3.870e-24
Identity = 83/241 (34.44%), Postives = 124/241 (51.45%), Query Frame = 0
Query:   15 GIELAEA-LRSQPCSVIVKSVRAGSKAAADRRIVPGLGVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYPPVAEDT------PTATAEGAVSLGTEAP-QQPVEQLMVK--------------RLTRARP--CGMVSQEGDLIEIRYTARIADTMRE-YDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSINGVTD 230
            G+EL++  + S P +V+V      +  A  +   PG+ +     LD    KS   V + IK  PYP+ L         D       P  +AE A+    +A  ++ V  L+ K              R+ +     CG+ S+ GD++EIRYTAR+       YD+SD RGTG PY   LG GD++ G+DL  YDMC GE R +++PA L YGA+G+ LF +P  S L + ++LV++N V +
Sbjct:  143 GLELSDTTIGSPPRNVVVIKSVFPNGVAFGQNAQPGMII-----LDYDNAKS---VVERIKAGPYPIDLRLYNLAAGGDAIGDLGRPLVSAEDALLAAEKASAEERVASLLSKSGXXXVGGGEGFTTRVVKKAEGSCGIQSRRGDVMEIRYTARVGGKEGYVYDSSDSRGTGTPYMYQLGNGDMIPGVDLGTYDMCPGEIRELDIPAQLGYGARGSKLFEIPGGSRLWWKIELVALNFVRE 375          
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A7S2ET29_TRICV (Peptidylprolyl isomerase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ET29_TRICV)

HSP 1 Score: 103 bits (256), Expect = 6.450e-22
Identity = 82/248 (33.06%), Postives = 124/248 (50.00%), Query Frame = 0
Query:    3 ATFSVTFESGPV--GIELAEALRSQPCSVI--VKSVRAGSKAAADRRIVPGLGVSVVGALDVCKGKSPPEVAKFI---KTAPYPLTLIFKYPPVAEDT-------PTATAEGAVSLGTEAPQQ-PVEQ--------LMVKRLTRARPCGMVSQEGDLIEIRYTARIADTMRE-YDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSIN 226
            A  +V  +S  V  G+EL +     P   +  V+SVR G  AA    + PG          +  G+ P  +   +   K+ PYP+ L F Y   A+         P  TAE A+     +  + PV          L V  + +   C + S+ GD++E+ Y AR+     + YD+S +RGTGQPY   LG GDV++G+DL +YDMC GE R + VP+ LAYG  G+ L+ +P+   + + V+LV +N
Sbjct:  128 AVTTVVLDSPDVKAGVELYDVKIGPPPRTVAAVRSVRPGG-AAYREGVQPGT---------ILLGRYPDGMKSVLGRMKSGPYPIVLQF-YDLAADGDAIGDLGRPIVTAEDALEAARASSSELPVLDTQGQLGTGLGVSTIRKGGSCEIKSRRGDVLEMNYEARVGGRDGQVYDSSAERGTGQPYMFVLGSGDVIKGVDLGMYDMCPGEVRELSVPSELAYGRLGSKLYRIPSGFRVWWKVELVRVN 364          
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A835ZH12_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH12_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 1.150e-19
Identity = 77/207 (37.20%), Postives = 104/207 (50.24%), Query Frame = 0
Query:   40 AAADRRIVPGLGVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYPPVAEDTPTATAEG---------AVSLGTEAPQQPVEQLMVKRLTRARPCGMVS--QEGDLIEIRYTARIADTMREYDASDK----RGTGQPYAITLG---RGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSINGV 228
            AAA RR+ PGL + V       +  S  + A  I+T   PLTL F+   +  ++  A A G         +  +   A  +  + L V+ + RA  C   +    GDL+EIRYTAR+A T   +DAS +    RG    +   LG   RG    G DL L  MC+GE R V VP  L YGA+G    GVP  +ALV+ V+LVS+N V
Sbjct:  129 AAARRRLRPGL-ILVSANGRPLEAASARQAADAIRTGARPLTLRFRDASLFNESLEAAAAGDGEGLKQGVSTRVVQAADPRDDQSLAVRTMRRADACRACAGAARGDLLEIRYTARLAATGAVFDASGRGAPGRGGDATFYFVLGEQPRGQFPPGWDLGLLGMCVGEVREVAVPPALGYGARGAPRRGVPGGAALVYEVELVSVNSV 334          
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A0F7SN15_PHARH (Peptidylprolyl isomerase n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SN15_PHARH)

HSP 1 Score: 91.7 bits (226), Expect = 2.390e-19
Identity = 46/118 (38.98%), Postives = 75/118 (63.56%), Query Frame = 0
Query:  108 APQQPVEQLMVKRLTRARPCGMVSQEGDLIEIRYTARIADTMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSI 225
            AP+ P+++L +    +   C + S++GD + + YT  + D  +++D+S  R   QP+  TLG G V++G D  L DMCIGE+R++ +PA + YGA+G     +P N+ALVF V+L+ I
Sbjct:   34 APEGPIKKLQIGVKFKPESCSLKSRKGDKLSMHYTGTLHDGGKKFDSSLDRN--QPFDFTLGAGQVIKGWDQGLLDMCIGEKRKLIIPADMGYGARGAGGV-IPGNAALVFEVELLDI 148          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5N8_9STRA2.730e-185100.00Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
D8LST8_ECTSI3.630e-4640.57Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A1Z5KS47_FISSO1.300e-3039.31Peptidylprolyl isomerase n=1 Tax=Fistulifera solar... [more]
A0A8J6CFR5_DIALT1.350e-2936.32Peptidylprolyl isomerase n=1 Tax=Diacronema luther... [more]
A0A7S1V2L7_9STRA1.790e-2938.92Peptidylprolyl isomerase n=1 Tax=Grammatophora oce... [more]
A0A7S0KXW8_9STRA1.040e-2646.22Peptidylprolyl isomerase n=1 Tax=Asterionellopsis ... [more]
A0A6U3U6Q1_9STRA3.870e-2434.44Peptidylprolyl isomerase n=1 Tax=Ditylum brightwel... [more]
A0A7S2ET29_TRICV6.450e-2233.06Peptidylprolyl isomerase n=1 Tax=Trieres chinensis... [more]
A0A835ZH12_9STRA1.150e-1937.20Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A0F7SN15_PHARH2.390e-1938.98Peptidylprolyl isomerase n=1 Tax=Phaffia rhodozyma... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR046357Peptidyl-prolyl cis-trans isomerase domain superfamilyGENE3D3.10.50.40coord: 105..227
e-value: 2.0E-27
score: 97.5
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00254FKBP_Ccoord: 131..223
e-value: 1.8E-18
score: 66.6
IPR001179FKBP-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50059FKBP_PPIASEcoord: 134..226
score: 22.997076
IPR044609Peptidyl-prolyl cis-trans isomerase FKBP2/11PANTHERPTHR45779FAMILY NOT NAMEDcoord: 107..231
NoneNo IPR availableSUPERFAMILY54534FKBP-likecoord: 113..231

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_215contigContig_215:68675..73608 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354183mRNA_18048Tribonema minus UTEX_B_3156 mRNAContig_215 68675..73690 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354183|estExt_Genemark1.C_Ctg_2150008 ID=Trimin1|354183|estExt_Genemark1.C_Ctg_2150008|Name=jgi.p|Trimin1|354183|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=265bp
MPATFSVTFESGPVGIELAEALRSQPCSVIVKSVRAGSKAAADRRIVPGL
GVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYPPVAEDTPTATAEG
AVSLGTEAPQQPVEQLMVKRLTRARPCGMVSQEGDLIEIRYTARIADTMR
EYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAY
GAKGNSLFGVPANSALVFGVQLVSINGVTDETATRDSNYYTGDPCNDEAR
RAGVASGLCDRLAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR046357PPIase_dom_sf
IPR001179PPIase_FKBP_dom
IPR044609FKBP2/11