mRNA_18048 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
Namejgi.p|Trimin1|354183
Unique NamemRNA_18048
TypemRNA
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Homology
[Close]
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A835Z5N8_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5N8_9STRA)

HSP 1 Score: 518 bits (1333), Expect = 5.710e-185
Identity = 264/264 (100.00%), Postives = 264/264 (100.00%), Query Frame = 1 
Query:    1 MPATFSVTFESGPVGIELAEALRSQPCSVIVKSVRAGSKAAADRRIVPGLGVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYPPVAEDTPTATAEGAVSLGTEAPQQPVEQLMVKRLTRARPCGMVSQEGDLIEIRYTARIADTMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSINGVTDETATRDSNYYTGDPCNDEARRAGVASGLCDRLAK 792
            MPATFSVTFESGPVGIELAEALRSQPCSVIVKSVRAGSKAAADRRIVPGLGVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYPPVAEDTPTATAEGAVSLGTEAPQQPVEQLMVKRLTRARPCGMVSQEGDLIEIRYTARIADTMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSINGVTDETATRDSNYYTGDPCNDEARRAGVASGLCDRLAK
Sbjct:    1 MPATFSVTFESGPVGIELAEALRSQPCSVIVKSVRAGSKAAADRRIVPGLGVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYPPVAEDTPTATAEGAVSLGTEAPQQPVEQLMVKRLTRARPCGMVSQEGDLIEIRYTARIADTMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSINGVTDETATRDSNYYTGDPCNDEARRAGVASGLCDRLAK 264
[Close]
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: D8LST8_ECTSI (Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LST8_ECTSI)

HSP 1 Score: 170 bits (431), Expect = 6.040e-46
Identity = 114/281 (40.57%), Postives = 154/281 (54.80%), Query Frame = 1 
Query:   79 CSVIVKSVRAGSKAAADRRIVPGLGVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYPPV---------------------------------AEDT-PTATAEGAV-----SLGTEAPQQPVEQLMVKRL-TRARPCGMVSQEGDLIEIRYTARIA-DTMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSA-----LVFGVQLVSINGVTDETATRDSNYYTGDPCNDEARRAGVASGLCDR 783
            C V V  V  GS+A     +  G GV+ VG     +   P EVA+ I+ +P P+ ++F+ P +                                 A DT  +ATA  AV     S+G         +L V ++  +   CG  ++ GDLIE RY+AR+A D   E+D+SD+RGTG PYAI LG GDVV+GLDLSL+DMC+GERR++E+PA LAYG KG+  FGVP +       +VFGV+LVSIN   + +  RD N+YT DPC+  A  AG ASG C +
Sbjct:  201 CRVYVTEVLTGSQAIRQANLRAGFGVAAVGGKPA-ERLEPKEVAELIRLSPRPMEIVFRDPELLGRRLQAEADRKAEAVKRRKQKAAADAASPETAAPDTGDSATATTAVDPRSGSVGNGGGSASSGELRVTQVGKKPEVCGTRTKAGDLIEFRYSARLASDLSVEFDSSDRRGTGLPYAIVLGNGDVVKGLDLSLFDMCVGERRKIEIPARLAYGRKGSKAFGVPPDDGTGSADVVFGVELVSINFSINASDARD-NFYTDDPCDAAAVAAGNASGQCKK 479
[Close]
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A1Z5KS47_FISSO (Peptidylprolyl isomerase n=1 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KS47_FISSO)

HSP 1 Score: 124 bits (312), Expect = 2.650e-30
Identity = 68/173 (39.31%), Postives = 102/173 (58.96%), Query Frame = 1 
Query:  190 KSPPEVAKFIKTAPYPLTLIFKYPPVAED------TPTATAEGAVSLGTEAPQQPVEQLMVKR-LTRARPCGMVSQEGDLIEIRYTARIADTMRE-YDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSINGV 684
            +S  +V + ++T PYP+TL F       D      TP  TA+ A+ L  +     +     K  L +   C + S+ GD++EI+Y AR        YD+S++RGTG+PY + LG GD++ G+DL LYDMC GE R +++P  L YG KGN +F VP ++ L + VQL++ING+
Sbjct:   95 ESAAQVQERLRTGPYPVTLKFTNLAAGGDAISDLGTPLVTAQDALRLAQQTATDTITSAYEKTILQKTTKCSLQSRRGDVLEIKYEARFQSPQGPIYDSSERRGTGRPYQMVLGSGDILAGVDLGLYDMCPGEIRTLQIPPPLGYGPKGNKMFRVPPDTTLFWKVQLMTINGM 267
[Close]
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A8J6CFR5_DIALT (Peptidylprolyl isomerase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CFR5_DIALT)

HSP 1 Score: 126 bits (317), Expect = 2.780e-29
Identity = 85/234 (36.32%), Postives = 123/234 (52.56%), Query Frame = 1 
Query:   16 SVTFESGPVGIELAEALRSQPCSVIVKSVRAGSKAAADRRIV-PGLGVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYPPVAEDTPTATAEGAVSLGTEAPQQPVEQLMVKRLTRARP-CGMVSQEGDLIEIRYTARIAD-TMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSINGVTDETATRD 708
            +V+F +  +G+ LA+   +    V V  +  GS+A  +R  V  G+ ++ +G   +       +V   I  AP P+ L F             A+ AV L  +A +   E+  ++R     P C + S++GD IEI Y  R+AD T R  D+S  RG G P+A+ LG GDV R L+L +YDMCIGE RR+  P  LAYG  GN   GVP N+ +VF V + +IN  TD    R+
Sbjct:  333 TVSFSARSLGLALADVDTADGARVAVSRIVPGSEA--ERTGVRAGVFLTAIGGEQLAPTVRAEDVRATIARAPRPVALTF--------AGALGADEAVGLAAKARRAETERFKLERTREPAPNCAIRSRKGDTIEIEYETRLADATQRVIDSSFMRGIGAPFALQLGNGDVPRALELGIYDMCIGEARRIVAPPRLAYGLAGNRALGVPPNATIVFDVTMSAINFQTDPATRRE 556
[Close]
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A7S1V2L7_9STRA (Peptidylprolyl isomerase n=1 Tax=Grammatophora oceanica TaxID=210454 RepID=A0A7S1V2L7_9STRA)

HSP 1 Score: 119 bits (298), Expect = 3.560e-29
Identity = 72/185 (38.92%), Postives = 106/185 (57.30%), Query Frame = 1 
Query:  202 EVAKFIKTAPYPLTLIFKYPPVAEDT------PTATAEGAVSLGTEAPQQPVEQ--------LMVKRLTRARPCGMV-SQEGDLIEIRYTARIADTMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSINGV-TDETATRD 708
            +V   I+  PYP+ L F       D       P  TAE A+ L  +  ++P           +  KR+ +  P  ++ S+ GDL+EI Y+A IA T  EYD+S  RGTGQPY + LG GD++ G+DL LYDM  GE+R++++P  L +G +G   FG+P  S+LV+ V+LV++NG    +  TRD
Sbjct:    5 DVITRIQQGPYPIDLEFLNLAAGGDAFGDMGRPLVTAEDALDLAKKTAEEPSTPPGDTSPAAVYTKRVLKEPPNRILQSRRGDLLEINYSATIAGTDYEYDSSAIRGTGQPYQMVLGSGDMIPGVDLGLYDMSPGEKRQLDIPQTLGHGPRGRKNFGIPEGSSLVWTVELVALNGAFAGDERTRD 189
[Close]
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A7S0KXW8_9STRA (Peptidylprolyl isomerase n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0KXW8_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.980e-26
Identity = 55/119 (46.22%), Postives = 79/119 (66.39%), Query Frame = 1 
Query:  379 CGMVSQEGDLIEIRYTARIADTMRE-YDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSIN--GVTDETATRDSNYYTG 726
            CG+ S+ GD++EI Y AR+A      YD+S++RGTGQPY   LG GDV++G+DL L+DMC GE R +++P+ L YG KG+ LF +P +  L + V+LV +N  G  +   TR+  Y  G
Sbjct:   24 CGIKSRRGDVLEINYEARVASPGGPIYDSSEQRGTGQPYQFVLGNGDVIKGVDLGLFDMCPGEVRELDIPSALGYGRKGSILFDIPGDVRLWWKVELVRLNFVGEGNNAKTREELYDGG 142
[Close]
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A6U3U6Q1_9STRA (Peptidylprolyl isomerase n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3U6Q1_9STRA)

HSP 1 Score: 109 bits (273), Expect = 7.390e-24
Identity = 83/241 (34.44%), Postives = 124/241 (51.45%), Query Frame = 1 
Query:   43 GIELAEA-LRSQPCSVIVKSVRAGSKAAADRRIVPGLGVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYPPVAEDT------PTATAEGAVSLGTEAP-QQPVEQLMVK--------------RLTRARP--CGMVSQEGDLIEIRYTARIADTMRE-YDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSINGVTD 690
            G+EL++  + S P +V+V      +  A  +   PG+ +     LD    KS   V + IK  PYP+ L         D       P  +AE A+    +A  ++ V  L+ K              R+ +     CG+ S+ GD++EIRYTAR+       YD+SD RGTG PY   LG GD++ G+DL  YDMC GE R +++PA L YGA+G+ LF +P  S L + ++LV++N V +
Sbjct:  143 GLELSDTTIGSPPRNVVVIKSVFPNGVAFGQNAQPGMII-----LDYDNAKS---VVERIKAGPYPIDLRLYNLAAGGDAIGDLGRPLVSAEDALLAAEKASAEERVASLLSKSGXXXVGGGEGFTTRVVKKAEGSCGIQSRRGDVMEIRYTARVGGKEGYVYDSSDSRGTGTPYMYQLGNGDMIPGVDLGTYDMCPGEIRELDIPAQLGYGARGSKLFEIPGGSRLWWKIELVALNFVRE 375
[Close]
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A7S2ET29_TRICV (Peptidylprolyl isomerase n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2ET29_TRICV)

HSP 1 Score: 103 bits (256), Expect = 1.190e-21
Identity = 82/248 (33.06%), Postives = 124/248 (50.00%), Query Frame = 1 
Query:    7 ATFSVTFESGPV--GIELAEALRSQPCSVI--VKSVRAGSKAAADRRIVPGLGVSVVGALDVCKGKSPPEVAKFI---KTAPYPLTLIFKYPPVAEDT-------PTATAEGAVSLGTEAPQQ-PVEQ--------LMVKRLTRARPCGMVSQEGDLIEIRYTARIADTMRE-YDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSIN 678
            A  +V  +S  V  G+EL +     P   +  V+SVR G  AA    + PG          +  G+ P  +   +   K+ PYP+ L F Y   A+         P  TAE A+     +  + PV          L V  + +   C + S+ GD++E+ Y AR+     + YD+S +RGTGQPY   LG GDV++G+DL +YDMC GE R + VP+ LAYG  G+ L+ +P+   + + V+LV +N
Sbjct:  128 AVTTVVLDSPDVKAGVELYDVKIGPPPRTVAAVRSVRPGG-AAYREGVQPGT---------ILLGRYPDGMKSVLGRMKSGPYPIVLQF-YDLAADGDAIGDLGRPIVTAEDALEAARASSSELPVLDTQGQLGTGLGVSTIRKGGSCEIKSRRGDVLEMNYEARVGGRDGQVYDSSAERGTGQPYMFVLGSGDVIKGVDLGMYDMCPGEVRELSVPSELAYGRLGSKLYRIPSGFRVWWKVELVRVN 364
[Close]
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A835ZH12_9STRA (Peptidylprolyl isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZH12_9STRA)

HSP 1 Score: 96.7 bits (239), Expect = 2.050e-19
Identity = 77/207 (37.20%), Postives = 104/207 (50.24%), Query Frame = 1 
Query:  118 AAADRRIVPGLGVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYPPVAEDTPTATAEG---------AVSLGTEAPQQPVEQLMVKRLTRARPCGMVS--QEGDLIEIRYTARIADTMREYDASDK----RGTGQPYAITLG---RGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSINGV 684
            AAA RR+ PGL + V       +  S  + A  I+T   PLTL F+   +  ++  A A G         +  +   A  +  + L V+ + RA  C   +    GDL+EIRYTAR+A T   +DAS +    RG    +   LG   RG    G DL L  MC+GE R V VP  L YGA+G    GVP  +ALV+ V+LVS+N V
Sbjct:  129 AAARRRLRPGL-ILVSANGRPLEAASARQAADAIRTGARPLTLRFRDASLFNESLEAAAAGDGEGLKQGVSTRVVQAADPRDDQSLAVRTMRRADACRACAGAARGDLLEIRYTARLAATGAVFDASGRGAPGRGGDATFYFVLGEQPRGQFPPGWDLGLLGMCVGEVREVAVPPALGYGARGAPRRGVPGGAALVYEVELVSVNSV 334
[Close]
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Match: A0A0F7SN15_PHARH (Peptidylprolyl isomerase n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SN15_PHARH)

HSP 1 Score: 91.7 bits (226), Expect = 4.070e-19
Identity = 46/118 (38.98%), Postives = 75/118 (63.56%), Query Frame = 1 
Query:  322 APQQPVEQLMVKRLTRARPCGMVSQEGDLIEIRYTARIADTMREYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAYGAKGNSLFGVPANSALVFGVQLVSI 675
            AP+ P+++L +    +   C + S++GD + + YT  + D  +++D+S  R   QP+  TLG G V++G D  L DMCIGE+R++ +PA + YGA+G     +P N+ALVF V+L+ I
Sbjct:   34 APEGPIKKLQIGVKFKPESCSLKSRKGDKLSMHYTGTLHDGGKKFDSSLDRN--QPFDFTLGAGQVIKGWDQGLLDMCIGEKRKLIIPADMGYGARGAGGV-IPGNAALVFEVELLDI 148
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354183 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5N8_9STRA5.710e-185100.00Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
D8LST8_ECTSI6.040e-4640.57Peptidylprolyl isomerase n=2 Tax=Ectocarpus TaxID=... [more]
A0A1Z5KS47_FISSO2.650e-3039.31Peptidylprolyl isomerase n=1 Tax=Fistulifera solar... [more]
A0A8J6CFR5_DIALT2.780e-2936.32Peptidylprolyl isomerase n=1 Tax=Diacronema luther... [more]
A0A7S1V2L7_9STRA3.560e-2938.92Peptidylprolyl isomerase n=1 Tax=Grammatophora oce... [more]
A0A7S0KXW8_9STRA1.980e-2646.22Peptidylprolyl isomerase n=1 Tax=Asterionellopsis ... [more]
A0A6U3U6Q1_9STRA7.390e-2434.44Peptidylprolyl isomerase n=1 Tax=Ditylum brightwel... [more]
A0A7S2ET29_TRICV1.190e-2133.06Peptidylprolyl isomerase n=1 Tax=Trieres chinensis... [more]
A0A835ZH12_9STRA2.050e-1937.20Peptidylprolyl isomerase n=1 Tax=Tribonema minus T... [more]
A0A0F7SN15_PHARH4.070e-1938.98Peptidylprolyl isomerase n=1 Tax=Phaffia rhodozyma... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_215contigContig_215:68675..73690 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Properties
Property NameValue
ProteomeIdTrimin1|354183|estExt_Genemark1.C_Ctg_2150008
BRITEko00000,ko01000,ko03110
KEGG koko:K09569
EC5.2.1.8
GOsGO:0000413,GO:0003674,GO:0003755,GO:0003824,GO:0005488,GO:0005527,GO:0005528,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006457,GO:0006464,GO:0006807,GO:0007275,GO:0008144,GO:0008150,GO:0008152,GO:0009987,GO:0016853,GO:0016859,GO:0018193,GO:0018208,GO:0019538,GO:0032501,GO:0032502,GO:0036211,GO:0043170,GO:0043412,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0048856,GO:0061077,GO:0071704,GO:0097159,GO:0140096,GO:1901363,GO:1901564
Descriptionpeptidyl-prolyl cis-trans isomerase activity
COG categoryO
Max annot lvl2759|Eukaryota
EggNOG OGsCOG0545@1|root,KOG0549@2759|Eukaryota
Evalue5.95e-47
Seed ortholog2880.D8LST8
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionSecreted FKBP domain protein
Ec32 orthologEc-15_002640.1
TranscriptId354505
TrackFilteredModels1
ProteinId354183
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354183gene_18048Tribonema minus UTEX_B_3156 geneContig_215 68675..73690 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354183Trimin1|354183|estExt_Genemark1.C_Ctg_2150008Tribonema minus UTEX_B_3156 polypeptideContig_215 68675..73608 +


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
exon_18048_1exon_18048_1Tribonema minus UTEX_B_3156 exonContig_215 68675..68791 +
exon_18048_2exon_18048_2Tribonema minus UTEX_B_3156 exonContig_215 69031..69205 +
exon_18048_3exon_18048_3Tribonema minus UTEX_B_3156 exonContig_215 69745..69852 +
exon_18048_4exon_18048_4Tribonema minus UTEX_B_3156 exonContig_215 70653..70831 +
exon_18048_5exon_18048_5Tribonema minus UTEX_B_3156 exonContig_215 72078..72139 +
exon_18048_6exon_18048_6Tribonema minus UTEX_B_3156 exonContig_215 73455..73690 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
CDS_18048CDS_18048Tribonema minus UTEX_B_3156 CDSContig_215 68675..68791 +


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
UTR3_18048UTR3_18048Tribonema minus UTEX_B_3156 three_prime_UTRContig_215 73609..73690 +


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>mRNA_18048 ID=mRNA_18048|Name=jgi.p|Trimin1|354183|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=877bp|location=Sequence derived from alignment at Contig_215:68675..73690+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTGCTACCTTCAGCGTGACATTTGAGAGTGGGCCAGTGGGGATTGA
GCTGGCAGAGGCGCTGCGGAGCCAGCCGTGCTCCGTCATTGTCAAATCCG
TACGCGCTGGCAGCAAGGCGGCTGCTGACCGGAGAATCGTGCCAGGGCTA
GGCGTCTCTGTGGTGGGAGCGCTGGACGTGTGCAAGGGCAAGTCGCCACC
TGAAGTTGCCAAGTTCATCAAGACGGCACCGTACCCGCTCACTCTCATCT
TCAAGTACCCGCCTGTGGCTGAGGACACCCCAACTGCGACCGCGGAGGGC
GCCGTGTCGCTGGGCACTGAGGCACCGCAGCAGCCGGTTGAGCAGCTGAT
GGTGAAGCGCCTCACGCGCGCGCGCCCGTGCGGCATGGTGTCGCAGGAAG
GCGACCTCATCGAGATCCGCTACACGGCACGTATCGCCGACACGATGCGC
GAGTACGACGCCAGCGACAAGCGCGGTACGGGGCAGCCGTACGCCATCAC
GCTCGGGCGCGGTGACGTCGTTCGCGGCCTGGACCTGTCCTTGTACGACA
TGTGCATAGGGGAGCGGCGGAGGGTGGAGGTGCCAGCAGGGCTTGCATAC
GGGGCTAAGGGCAACAGTCTGTTTGGGGTCCCCGCCAACAGTGCTCTTGT
GTTTGGGGTGCAGCTGGTGAGCATCAATGGCGTAACCGACGAAACTGCCA
CGCGCGACAGCAACTACTACACAGGCGACCCTTGCAACGACGAGGCGCGC
AGAGCCGGCGTTGCCAGCGGTCTGTGTGACCGACTTGCAAAATAGCATTT
GGCGACAGCATTACTTCACAGTACATGAGACCAAATAGCATTTGGCGACA
GCATTACTTCACAGTACATGGGACCAA
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protein sequence of jgi.p|Trimin1|354183

>Trimin1|354183|estExt_Genemark1.C_Ctg_2150008 ID=Trimin1|354183|estExt_Genemark1.C_Ctg_2150008|Name=jgi.p|Trimin1|354183|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=265bp
MPATFSVTFESGPVGIELAEALRSQPCSVIVKSVRAGSKAAADRRIVPGL
GVSVVGALDVCKGKSPPEVAKFIKTAPYPLTLIFKYPPVAEDTPTATAEG
AVSLGTEAPQQPVEQLMVKRLTRARPCGMVSQEGDLIEIRYTARIADTMR
EYDASDKRGTGQPYAITLGRGDVVRGLDLSLYDMCIGERRRVEVPAGLAY
GAKGNSLFGVPANSALVFGVQLVSINGVTDETATRDSNYYTGDPCNDEAR
RAGVASGLCDRLAK*
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mRNA from alignment at Contig_215:68675..73690+

Legend: polypeptideexonCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_18048 ID=mRNA_18048|Name=jgi.p|Trimin1|354183|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5016bp|location=Sequence derived from alignment at Contig_215:68675..73690+ (Tribonema minus UTEX_B_3156 )
ATGCCTGCTACCTTCAGCGTGACATTTGAGAGTGGGCCAGTGGGGATTGA
GCTGGCAGAGGCGCTGCGGAGCCAGCCGTGCTCCGTCATTGTCAAATCCG
TACGCGCTGGCAGCAAGGTAACTTGAACATTTTAACTTCAAGCATTCAAG
ATCAAGTGCTCTATGCGCTACTGACGCATCGTCCAATGTGCACCTTGCTG
CCTAGTGTTGATCCAAGACTGTTGGATGAAGTCCAATGACATCTTCAGCA
GTGACTGCATGCCTCATTCATCTCCGCCCCCTCGTTTTGCATAAAAGCTT
CAGCACCTCACACAAAGTCGTAAATTGAAGTTCAACTGTCTGTCTCCCAT
GTGTAGGCGGCTGCTGACCGGAGAATCGTGCCAGGGCTAGGCGTCTCTGT
GGTGGGAGCGCTGGACGTGTGCAAGGGCAAGTCGCCACCTGAAGTTGCCA
AGTTCATCAAGACGGCACCGTACCCGCTCACTCTCATCTTCAAGTACCCG
CCTGTGGCTGAGGACACCCCAACTGCGACCGGTGAGCAATGCTGTGGACA
GTGCGAAACTGGCACCCAGTGCTCGCGGTGGAGTTTCATGTCACAGTGCT
CAACATTTGGATTGTGTCTTTGACGATACGCACTTCCGGGTTCGGGTGAT
GATTGACATGAGCTGGAGTGCCCACAAAATGTGTAAGCATAGTGGTGAGG
TGCTTCAGCTATCCGTTCTGTCGTATGCACTTCAGGAGCGTCTTTGACGG
AGCACTGCAGTGAGGACGCAGCACTCCAATGCAGTACAGTATGGTACAGC
GCAGTACAGTGCCGATACTGCGCACGAGACACACCTGCTGCAAACTTTAA
AAACTGCTGCCCTCCCAGTATCACAATGTTCATCGGGCTTGAGGGTACAG
CACTCATGACCCCAGGACGTGTGCCGCGTGAAACTCACAATGCGGGTGCT
CCATCCTCTATTCTGCTCCCCTTCGATTTCCTATTGCATCAGGACAAGCG
CAAGCTCCCGCAGGCGGCGACTCACCGTATTCAGCACAAACTGCAAGTGG
TGCGTCACCTCAAGTTGAAGCGGAGGGCGCCGTGTCGCTGGGCACTGAGG
CACCGCAGCAGCCGGTTGAGCAGCTGATGGTGAAGCGCCTCACGCGCGCG
CGCCCGTGCGGCATGGTGTCGCAGGAAGGTGGGGCACAATCACTTCCCAA
CCCCATAGGGAATTCTAGCCCTAACCCCAAGCCCTAACCCAAGCCGTAAC
GCCCCCTCAGACCTAAATTTCAACCTGTTCACGGGGCCTAGGTGTTTTTG
AGTCACACGCAGACATGAAGCGCGCAGCAGCTTCAATTACGCCGTGCGCT
ACAGCTCGGGCACTGGTTCTCTGTTGCCCTGCCGTTTTGCTCCTTGCTGT
ATGCAATAATCCTCTTATTTGCGAATTCTCAAAGGCAGCTCCTTCGGTGA
CTCCATGCAGGTTCTCGGCAATTGTGCATGTCAGGTCAGATACGGACCTA
AACAAGCAGGGTCTGCAGTGCCTGCATGTCCCAGCACTAGATAACCCTGA
ACTATGCGTGAGTGCACCTAGGTAGTGTGGTGTGCCGACAGCAAAAAAAA
GGTGAGGTTGTTAGGTCGAGTCACAACTTGAGTGTTGCAGTGCAGCGTGT
CATGGCATCGTGTATGCTGTGCCAAACAAAGCTGCAATGAGGGCCGCCAA
CTGCCAGGACATGGCCAACATCTGCAATGACGCAACGACCAGCGCGCACA
CTTCCAAGTACATCAACTAGCCAGGCTTGAAGTGCTTCATAGTGATGTGG
AGCAGCAGCACATGAAGCACATGAGATACCGTGCAATTTGTCAAAGCAGC
AGCGCTGTGGTTCACCTTCTCCACATGGCCTTGAGCCCCCGGGTCACACG
CGGTCGGACTGGTGACACATGCACTTTCACAGCACACTTGAAGTTGGAGC
GCGCACCCGTGCGTTGTTTTTACCGTAGGCGACCTCATCGAGATCCGCTA
CACGGCACGTATCGCCGACACGATGCGCGAGTACGACGCCAGCGACAAGC
GCGGTACGGGGCAGCCGTACGCCATCACGCTCGGGCGCGGTGACGTCGTT
CGCGGCCTGGACCTGTCCTTGTACGACATGTGCATAGGGGAGCGGCGGAG
GGTGGAGGTGGGTGTGCTGATGCTCATACTTTTATGAATACATGCACGTC
AAGATCAAGCAGCAAGTTCATACTTGAAGGCGAAGTAGTGGTGGAAGCAC
GCTCGGGCGTTGTGACGTCGTTCGCGGCCTGGACCTGTCCTTGTACGACA
TGTGCATTGGGGAGCGACGCAGGGTAGAGGTAGGTGTGCTGATGCTCATA
CTACAATGTACATCAAGGTCAAGCAGCAAGTTCGTACTTGAAGTTTAAAT
AGTGCTTCAACTGGATGTTGAAGTAGTGGAGTCAGCACGCTTCGGGCGCG
GTGACGTCGTGCGCGGCCTGGACTTGTCCTTGTACGACGCGTGCATAGGG
GAATGGCGGAGGGTAGAGGTGGGTGCTGCTTGCACGGCACCGATACTTGT
ACTGCAATGTGCATCAAGGCCAAGTAGCAGCCTTGCAGCAAGTTCATGCT
TGAATGAAGTCGTGGTGGAGTGTCAGCACGCTCGGGCGCGGTGACGTCGT
TTACGGCTTGGACTTGTCCTCGTACGACATGTGCATATGTAGGCGAGCGG
CGGAGGGCGGAGGTGGGTGCTTGCTCGCGCCGATGCTCAAACATCAAGTT
GAAGAAACAGCCGCGTTCAAACTTGAAGTTGAAGTAGTTGTGAAGGGTCT
CAGCACGCTCAGCCGTGAAAATCTTGTGCGCGGGGAATGGCGGAGAGTAG
AGGCGGGCGCTGTGCATGCGCCATGCTTCTACTTCAAGTTGGAAAACTGT
TTTCAGCCCAAAGTTGAAGATGTAATCGGCGCCTTGGCGCGCCACATGAC
CAGACCAGCACATGTGCATTGGACAGCACTGAAACGTGGTCCGGGGCATT
GCTGATCACACGTGTGCTACTGCTGGATATTTTGGTGACGCTTGCCAGAG
GTTGACAATCGCCAAGCTGGCTACCTCGGCTGTGACACTGGCGAGTACAG
GTCGGAAGTGTACTCGTAGCATGTGAGCGGTGCAGTGGCAGCATCACAGT
GCCCAGCACCTGAACAGCGTTGCCAGTTTCCTGAACTGCAGTGCCGTACT
GCTGTGCTGCCTCCTCGCTTAAGCCGTGGCTGCTTCTCGGCGCTGCTGCA
TCTTGTGTCGCGCGTTGCTTTTCGGCGATGGCGCATCTCTTATCACACAA
CGTGCCATTGCTGTTCAGTGCCGCAAGAACTCTCTGGCTCACAGCAGGCG
ACCTGACATGCTTTGCCGCCGTGTGTCATCGCTGCTTTCTGGGGATATCG
CAGGTGCCAGCAGGGCTTGCATACGGGGCTAAGGGCAACAGTCTGTTTGG
GGTCCCCGCCAACAGGTGCGATGTGTTGAAGTTTACTGTCAGTCTTGCGC
AGTTATCTGTGAAAATAAGCTGTGAGAGACAAACCACAGTTGCTGTTCTG
ACAAAGTCCTCACATATGTGGAAGATAATTTCAAAGAATCCTTCCTCCCT
TGTGGTGTACTGTTCATGGAATCTCGGTCAGGGCGTGAAAAGCCAGGAGG
ATGTAAACAACTTAAGCGCCAAGAGGTTGATGTCTCGTCGCACAATCTCA
CAATACTCAAGTTGTTCCAAACATGCCTTCGCCCAACGGCATCGATGGCA
CAATGTATGACAGCCAATTCCAACTGGGCTGAGCTGCGCTTGCGCTTGTG
TTCTCCAGCACAGCTTTCCTTAACAAAAACGAATCAAAAGATCGTAGAGC
TCTAGGTGACAAGGGATGGTTAGCCGCAAGTGCCTTCCACCAATAATATG
ACTGCAGGTACTTACTTCAGACAATGTCTTTACAACGACTTGGTACTGCA
TGTTCGTCTCATGTGGCCTCGCTGAGTGCTCGATGAAGCCCGAATCATGT
ACTTCGAAGTACTTTCCAAAAAGTTGCACTTTCATGATAATTGATGTACT
GTGTATCTGCCATGTAAGCGTGCGCTGCGCGCCTTTTCACTTTACATCCA
TTTTGATTTTGCCTGTGGCGCCCATGAGAGAGTTGCAGGTGTTGGCGGCT
CCACTGCATGACACGGCCCTGTGCACCAGGAGCCATTGCCACTGAATTCA
TCTGTACCAGATTTCGTCACTACTATTTTTTGTTGTTTGCATTGCCCAAA
CGGTGATGGGAGCTGGTGGCTGCGCTGCATTGATTGACGCGCCAGTGCTC
AGCAGTCCGTGCTCCGTGAATCTATTGCCACTGTTCTACTCAGTAATGTA
TGCTGAATTTCAGGGTGCAGCGCAAGCAATGTAAGAGTGAGCGGCTGCAA
TGGTCAGGCAACCCTAGAGACGGTGAGGCCAATGTTCAACGCGAGCAAGC
CACGAAGTGCTGCGAGACGGTCTGTGCAAGTGCTGCTTGCTTGACAGCTG
TCAGTCCGGCATCAACCAGGCTGCAGCAAAGTGGGTCCCAGAAAGAGTGC
AGAACCGCCGCGGCATGGAGTTTAACTTGTGTTCATCAGGGTTCAGCTTT
GCATCTGTGCTCTTCTGCTGAGGTGCACAACGAACAACAGCCTTTTTCTT
TGTGCTTTGCCCGGCAGCTGCACAAAGCGCTGCACCCCACAACATCTGCA
TGCCCACTACAACATGTGACTGCGTGATTGCCCACCCCTCTCATCCTTCT
CCCCTATTGCGCTGTCGCCTGCACCTGCAGTGCTCTTGTGTTTGGGGTGC
AGCTGGTGAGCATCAATGGCGTAACCGACGAAACTGCCACGCGCGACAGC
AACTACTACACAGGCGACCCTTGCAACGACGAGGCGCGCAGAGCCGGCGT
TGCCAGCGGTCTGTGTGACCGACTTGCAAAATAGCATTTGGCGACAGCAT
TACTTCACAGTACATGAGACCAAATAGCATTTGGCGACAGCATTACTTCA
CAGTACATGGGACCAA
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Coding sequence (CDS) from alignment at Contig_215:68675..73690+

>mRNA_18048 ID=mRNA_18048|Name=jgi.p|Trimin1|354183|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=795bp|location=Sequence derived from alignment at Contig_215:68675..73690+ (Tribonema minus UTEX_B_3156 )
ATGCCTGCTACCTTCAGCGTGACATTTGAGAGTGGGCCAGTGGGGATTGA
GCTGGCAGAGGCGCTGCGGAGCCAGCCGTGCTCCGTCATTGTCAAATCCG
TACGCGCTGGCAGCAAGGCGGCTGCTGACCGGAGAATCGTGCCAGGGCTA
GGCGTCTCTGTGGTGGGAGCGCTGGACGTGTGCAAGGGCAAGTCGCCACC
TGAAGTTGCCAAGTTCATCAAGACGGCACCGTACCCGCTCACTCTCATCT
TCAAGTACCCGCCTGTGGCTGAGGACACCCCAACTGCGACCGCGGAGGGC
GCCGTGTCGCTGGGCACTGAGGCACCGCAGCAGCCGGTTGAGCAGCTGAT
GGTGAAGCGCCTCACGCGCGCGCGCCCGTGCGGCATGGTGTCGCAGGAAG
GCGACCTCATCGAGATCCGCTACACGGCACGTATCGCCGACACGATGCGC
GAGTACGACGCCAGCGACAAGCGCGGTACGGGGCAGCCGTACGCCATCAC
GCTCGGGCGCGGTGACGTCGTTCGCGGCCTGGACCTGTCCTTGTACGACA
TGTGCATAGGGGAGCGGCGGAGGGTGGAGGTGCCAGCAGGGCTTGCATAC
GGGGCTAAGGGCAACAGTCTGTTTGGGGTCCCCGCCAACAGTGCTCTTGT
GTTTGGGGTGCAGCTGGTGAGCATCAATGGCGTAACCGACGAAACTGCCA
CGCGCGACAGCAACTACTACACAGGCGACCCTTGCAACGACGAGGCGCGC
AGAGCCGGCGTTGCCAGCGGTCTGTGTGACCGACTTGCAAAATAG
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