Trimin1|354143|estExt_Genemark1.C_Ctg_2120001 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|354143
Unique NameTrimin1|354143|estExt_Genemark1.C_Ctg_2120001
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length459
Homology
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BLAST of jgi.p|Trimin1|354143 vs. uniprot
Match: A0A835Z324_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z324_9STRA)

HSP 1 Score: 376 bits (966), Expect = 1.340e-123
Identity = 458/458 (100.00%), Postives = 458/458 (100.00%), Query Frame = 0 
Query:    1 MQTENQQDRWSGPAASKPAAAAVLRLRALCDEILQCVNPSIMLQATCKLFRDIIGADSNGATCTLVSDGVATVEVLRWALQSGLDPAAALIGCVRAGRLGVLVELLRLHSAVALPRGRRRQALLLAASAGHLSFLQCLVVNGFRFHPTDCQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDWTCALAXXXXXXXXXXXXXXXXXXXDEYTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGEETCDAXXXXXXXXXXXXXXXXXXXXDKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPPPVAAWQRQEGAAAAETDGSCHGHRARTYFTYARGEGGGDAKKSTEAGDS 458
            MQTENQQDRWSGPAASKPAAAAVLRLRALCDEILQCVNPSIMLQATCKLFRDIIGADSNGATCTLVSDGVATVEVLRWALQSGLDPAAALIGCVRAGRLGVLVELLRLHSAVALPRGRRRQALLLAASAGHLSFLQCLVVNGFRFHPTDCQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDWTCALAXXXXXXXXXXXXXXXXXXXDEYTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGEETCDAXXXXXXXXXXXXXXXXXXXXDKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPPPVAAWQRQEGAAAAETDGSCHGHRARTYFTYARGEGGGDAKKSTEAGDS
Sbjct:    1 MQTENQQDRWSGPAASKPAAAAVLRLRALCDEILQCVNPSIMLQATCKLFRDIIGADSNGATCTLVSDGVATVEVLRWALQSGLDPAAALIGCVRAGRLGVLVELLRLHSAVALPRGRRRQALLLAASAGHLSFLQCLVVNGFRFHPTDCQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDWTCALAXXXXXXXXXXXXXXXXXXXDEYTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGEETCDAXXXXXXXXXXXXXXXXXXXXDKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPPPVAAWQRQEGAAAAETDGSCHGHRARTYFTYARGEGGGDAKKSTEAGDS 458
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BLAST of jgi.p|Trimin1|354143 vs. uniprot
Match: A0A836CKU3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKU3_9STRA)

HSP 1 Score: 130 bits (326), Expect = 2.670e-30
Identity = 75/139 (53.96%), Postives = 90/139 (64.75%), Query Frame = 0 
Query:   16 SKPAAAAVLRLRALCDEILQCVNPSIMLQATCKLFRDIIGADSNGATCTLVSDGVATVEVLRWALQSGLDPAAALIGCVRAGRLGVLVELLRLHSAVALPRGRRRQALLLAASAGHLSFLQCLVVNGFRFHPTD-CQAA 153
            + P AAAV  L ALC+ ILQ + PS+ML+ TCK FRD + A S+G   T   DGVA + VLRWAL SGL+PAAAL  CVR+ ++ VL ELLRL+ A AL R      L  AA AG L  L+CL  NGFRF+    C AA
Sbjct:   28 ASPLAAAVFDLHALCNRILQGLRPSVMLRTTCKQFRDTVDASSDGPPRTFAEDGVANITVLRWALLSGLEPAAALTACVRSRKVEVLGELLRLYPASALRRSHCTMKL--AAGAGRLPILECLQANGFRFNVKGTCSAA 164
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BLAST of jgi.p|Trimin1|354143 vs. uniprot
Match: A0A835YKC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC4_9STRA)

HSP 1 Score: 131 bits (329), Expect = 2.450e-29
Identity = 71/133 (53.38%), Postives = 85/133 (63.91%), Query Frame = 0 
Query:   21 AAVLRLRALCDEILQCVNPSIMLQATCKLFRDIIGADSNGATCTLVSDGVATVEVLRWALQSGLDPAAALIGCVRAGRLGVLVELLRLHSAVALPRGRRRQALLLAASAGHLSFLQCLVVNGFRFHPTDCQAA 153
            AAV    ALC+  LQ + PS+ML+ATC+ FRD +GA +    CT   DGV +V VL WAL+S L+PAAAL  CVR GR G L  LLRLH   +LPR     AL+LAA  G L+ LQ L +NGF  HP  C AA
Sbjct:   77 AAVFSQPALCEHALQFLRPSVMLRATCRPFRDAVGAATGDGACTFADDGVVSVPVLGWALESSLEPAAALRACVRGGRAGELTHLLRLHPGASLPRDHH--ALVLAAGFGCLAMLQILALNGFTGHPAVCAAA 207
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|354143 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A835Z324_9STRA1.340e-123100.00Ankyrin repeat-containing domain protein n=1 Tax=T... [more]
A0A836CKU3_9STRA2.670e-3053.96Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YKC4_9STRA2.450e-2953.38Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 181..408
e-value: 9.3E-14
score: 52.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 44..180
e-value: 2.4E-7
score: 32.3
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 89..403
NoneNo IPR availablePANTHERPTHR46586ANKYRIN REPEAT-CONTAINING PROTEINcoord: 244..422
coord: 74..241
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 74..241
NoneNo IPR availablePANTHERPTHR46586:SF3ANKYRIN REPEAT-CONTAINING PROTEINcoord: 244..422

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_212contigContig_212:879..6150 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|354143mRNA_17686Tribonema minus UTEX_B_3156 mRNAContig_212 879..6221 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|354143|estExt_Genemark1.C_Ctg_2120001 ID=Trimin1|354143|estExt_Genemark1.C_Ctg_2120001|Name=jgi.p|Trimin1|354143|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=459bp
MQTENQQDRWSGPAASKPAAAAVLRLRALCDEILQCVNPSIMLQATCKLF
RDIIGADSNGATCTLVSDGVATVEVLRWALQSGLDPAAALIGCVRAGRLG
VLVELLRLHSAVALPRGRRRQALLLAASAGHLSFLQCLVVNGFRFHPTDC
QAAANRGHLEVLQWLRQLGCAWNKGTCSEAAGGGHLETLQWARANDCPWD
ESTYYSAARGGHLEVLQWARANGCPWNNRTCTSAAAGGHLEDDWTCALAA
EGGHLEVLQWAHAAWCPWDEYTFALAAAWGNLDMLQWAHATGCPWDGWVY
HAAAEYGHLEVLQWAAANECPWDNGEETCDAAARGGHLEVLQWARANGCP
WDKSSCSSAAEYGHLEVLQWAHAKGCPWGEDACKAAAGGGHLEVLQWAHG
NGCPWAQPPPVAAWQRQEGAAAAETDGSCHGHRARTYFTYARGEGGGDAK
KSTEAGDS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036770Ankyrin_rpt-contain_sf