mRNA_17686 (mRNA) Tribonema minus UTEX_B_3156

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	jgi.p\|Trimin1\|354143
Unique Name	mRNA_17686
Type	mRNA
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )

Homology

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BLAST of jgi.p|Trimin1|354143 vs. uniprot
Match: A0A835Z324_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z324_9STRA)

HSP 1 Score: 375 bits (964), Expect = 5.850e-123
Identity = 458/458 (100.00%), Postives = 458/458 (100.00%), Query Frame = 1

Query:    1 MQTENQQDRWSGPAASKPAAAAVLRLRALCDEILQCVNPSIMLQATCKLFRDIIGADSNGATCTLVSDGVATVEVLRWALQSGLDPAAALIGCVRAGRLGVLVELLRLHSAVALPRGRRRQALLLAASAGHLSFLQCLVVNGFRFHPTDCQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDWTCALAXXXXXXXXXXXXXXXXXXXDEYTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGEETCDAXXXXXXXXXXXXXXXXXXXXDKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPPPVAAWQRQEGAAAAETDGSCHGHRARTYFTYARGEGGGDAKKSTEAGDS 1374
            MQTENQQDRWSGPAASKPAAAAVLRLRALCDEILQCVNPSIMLQATCKLFRDIIGADSNGATCTLVSDGVATVEVLRWALQSGLDPAAALIGCVRAGRLGVLVELLRLHSAVALPRGRRRQALLLAASAGHLSFLQCLVVNGFRFHPTDCQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDWTCALAXXXXXXXXXXXXXXXXXXXDEYTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGEETCDAXXXXXXXXXXXXXXXXXXXXDKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPPPVAAWQRQEGAAAAETDGSCHGHRARTYFTYARGEGGGDAKKSTEAGDS
Sbjct:    1 MQTENQQDRWSGPAASKPAAAAVLRLRALCDEILQCVNPSIMLQATCKLFRDIIGADSNGATCTLVSDGVATVEVLRWALQSGLDPAAALIGCVRAGRLGVLVELLRLHSAVALPRGRRRQALLLAASAGHLSFLQCLVVNGFRFHPTDCQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEDDWTCALAXXXXXXXXXXXXXXXXXXXDEYTFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNGEETCDAXXXXXXXXXXXXXXXXXXXXDKSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAQPPPVAAWQRQEGAAAAETDGSCHGHRARTYFTYARGEGGGDAKKSTEAGDS 458

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BLAST of jgi.p|Trimin1|354143 vs. uniprot
Match: A0A836CKU3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKU3_9STRA)

HSP 1 Score: 130 bits (326), Expect = 3.720e-30
Identity = 75/139 (53.96%), Postives = 90/139 (64.75%), Query Frame = 1

Query:   46 SKPAAAAVLRLRALCDEILQCVNPSIMLQATCKLFRDIIGADSNGATCTLVSDGVATVEVLRWALQSGLDPAAALIGCVRAGRLGVLVELLRLHSAVALPRGRRRQALLLAASAGHLSFLQCLVVNGFRFHPTD-CQAA 459
            + P AAAV  L ALC+ ILQ + PS+ML+ TCK FRD + A S+G   T   DGVA + VLRWAL SGL+PAAAL  CVR+ ++ VL ELLRL+ A AL R      L  AA AG L  L+CL  NGFRF+    C AA
Sbjct:   28 ASPLAAAVFDLHALCNRILQGLRPSVMLRTTCKQFRDTVDASSDGPPRTFAEDGVANITVLRWALLSGLEPAAALTACVRSRKVEVLGELLRLYPASALRRSHCTMKL--AAGAGRLPILECLQANGFRFNVKGTCSAA 164

[Close]

BLAST of jgi.p|Trimin1|354143 vs. uniprot
Match: A0A835YKC4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YKC4_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.460e-29
Identity = 71/133 (53.38%), Postives = 85/133 (63.91%), Query Frame = 1

Query:   61 AAVLRLRALCDEILQCVNPSIMLQATCKLFRDIIGADSNGATCTLVSDGVATVEVLRWALQSGLDPAAALIGCVRAGRLGVLVELLRLHSAVALPRGRRRQALLLAASAGHLSFLQCLVVNGFRFHPTDCQAA 459
            AAV    ALC+  LQ + PS+ML+ATC+ FRD +GA +    CT   DGV +V VL WAL+S L+PAAAL  CVR GR G L  LLRLH   +LPR     AL+LAA  G L+ LQ L +NGF  HP  C AA
Sbjct:   77 AAVFSQPALCEHALQFLRPSVMLRATCRPFRDAVGAATGDGACTFADDGVVSVPVLGWALESSLEPAAALRACVRGGRAGELTHLLRLHPGASLPRDHH--ALVLAAGFGCLAMLQILALNGFTGHPAVCAAA 207

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|354143 vs. uniprot

BLAST of jgi.p|Trimin1|354143 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
A0A835Z324_9STRA	5.850e-123	100.00	Ankyrin repeat-containing domain protein n=1 Tax=T...	[more]
A0A836CKU3_9STRA	3.720e-30	53.96	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A835YKC4_9STRA	3.460e-29	53.38	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_212	contig	Contig_212:879..6221 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Properties


Property Name	Value
ProteomeId	Trimin1\|354143\|estExt_Genemark1.C_Ctg_2120001
Hectar predicted targeting category	other localisation
TranscriptId	354465
Track	FilteredModels1
ProteinId	354143

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354143	gene_17686	Tribonema minus UTEX_B_3156	gene	Contig_212 879..6221 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|354143	Trimin1\|354143\|estExt_Genemark1.C_Ctg_2120001	Tribonema minus UTEX_B_3156	polypeptide	Contig_212 879..6150 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
exon_17686_1	exon_17686_1	Tribonema minus UTEX_B_3156	exon	Contig_212 879..1601 +
exon_17686_2	exon_17686_2	Tribonema minus UTEX_B_3156	exon	Contig_212 1719..2012 +
exon_17686_3	exon_17686_3	Tribonema minus UTEX_B_3156	exon	Contig_212 2094..2292 +
exon_17686_4	exon_17686_4	Tribonema minus UTEX_B_3156	exon	Contig_212 5921..6029 +
exon_17686_5	exon_17686_5	Tribonema minus UTEX_B_3156	exon	Contig_212 6099..6221 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
CDS_17686	CDS_17686	Tribonema minus UTEX_B_3156	CDS	Contig_212 879..1601 +

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
UTR3_17686	UTR3_17686	Tribonema minus UTEX_B_3156	three_prime_UTR	Contig_212 6151..6221 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Contig_212:879..6221+
coding sequence from alignment at Contig_212:879..6221+

spliced messenger RNA

>mRNA_17686 ID=mRNA_17686|Name=jgi.p|Trimin1|354143|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=1448bp|location=Sequence derived from alignment at Contig_212:879..6221+ (Tribonema minus UTEX_B_3156 )|Notes=Excludes all bases but those of type(s): exon.  
ATGCAGACGGAGAACCAGCAGGACCGTTGGTCAGGCCCGGCGGCATCGAA
GCCAGCGGCAGCAGCCGTGCTCCGCCTGCGTGCTCTTTGCGACGAGATCC
TTCAATGCGTGAACCCCAGCATCATGCTCCAGGCCACCTGCAAGCTCTTC
AGAGACATCATAGGCGCAGATAGCAATGGCGCCACCTGCACCCTCGTCAG
CGATGGCGTCGCTACCGTCGAGGTCCTCAGGTGGGCCTTGCAGAGCGGTC
TGGACCCCGCAGCAGCGCTCATCGGCTGCGTGCGCGCGGGGAGGCTGGGC
GTGCTCGTCGAGCTGCTTCGCCTTCACTCCGCCGTGGCCCTGCCCAGAGG
CAGAAGGCGCCAGGCCTTGCTTCTAGCAGCAAGCGCTGGCCACCTCTCCT
TCCTCCAGTGCCTGGTGGTCAACGGCTTCCGCTTCCACCCCACAGATTGC
CAGGCAGCCGCCAATCGCGGGCACCTCGAGGTGCTGCAGTGGCTGCGTCA
ACTCGGCTGCGCCTGGAACAAGGGTACATGCTCGGAAGCAGCCGGCGGCG
GGCATCTCGAGACGCTCCAGTGGGCACGCGCAAACGACTGCCCCTGGGAC
GAGTCAACATACTACTCAGCAGCAAGGGGTGGGCACCTTGAGGTGCTCCA
GTGGGCGCGTGCCAACGGCTGCCCCTGGAACAATCGCACTTGCACTTCAG
CAGCGGCGGGCGGGCACTTGGAGGACGACTGGACATGCGCTTTGGCGGCG
GAAGGCGGTCACCTAGAGGTGCTCCAGTGGGCACACGCCGCTTGGTGCCC
CTGGGACGAGTACACGTTTGCCCTAGCAGCGGCGTGGGGGAACCTCGATA
TGCTGCAGTGGGCGCACGCCACCGGCTGCCCCTGGGACGGCTGGGTTTAC
CATGCAGCAGCAGAATACGGCCACCTCGAGGTGCTCCAGTGGGCGGCGGC
AAACGAGTGCCCCTGGGATAACGGCGAGGAGACGTGCGACGCAGCGGCAC
GCGGCGGCCACCTCGAGGTGCTCCAGTGGGCGCGTGCCAACGGCTGCCCC
TGGGACAAGTCATCATGTTCTTCGGCGGCAGAGTACGGGCACCTCGAGGT
GCTCCAGTGGGCACATGCCAAAGGCTGCCCCTGGGGTGAGGATGCGTGCA
AGGCAGCAGCAGGCGGCGGGCACCTCGAGGTGCTCCAGTGGGCGCACGGC
AATGGCTGCCCCTGGGCCCAGCCCCCCCCCGTTGCCGCGTGGCAGCGGCA
GGAGGGGGCGGCAGCGGCGGAAACGGATGGGAGCTGCCACGGACACAGGG
CACGCACCTACTTCACCTACGCGAGGGGGGAGGGGGGGGGGGACGCTAAG
AAATCTACAGAGGCTGGCGACAGCTAGGAGGAAGGGTACCACAGGACCCA
GGATTGGGGTACCCGCACAATCCCCCTCCCCCCCCCCCCCGCGCGCCC

protein sequence of jgi.p|Trimin1|354143

>Trimin1|354143|estExt_Genemark1.C_Ctg_2120001 ID=Trimin1|354143|estExt_Genemark1.C_Ctg_2120001|Name=jgi.p|Trimin1|354143|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=459bp
MQTENQQDRWSGPAASKPAAAAVLRLRALCDEILQCVNPSIMLQATCKLF
RDIIGADSNGATCTLVSDGVATVEVLRWALQSGLDPAAALIGCVRAGRLG
VLVELLRLHSAVALPRGRRRQALLLAASAGHLSFLQCLVVNGFRFHPTDC
QAAANRGHLEVLQWLRQLGCAWNKGTCSEAAGGGHLETLQWARANDCPWD
ESTYYSAARGGHLEVLQWARANGCPWNNRTCTSAAAGGHLEDDWTCALAA
EGGHLEVLQWAHAAWCPWDEYTFALAAAWGNLDMLQWAHATGCPWDGWVY
HAAAEYGHLEVLQWAAANECPWDNGEETCDAAARGGHLEVLQWARANGCP
WDKSSCSSAAEYGHLEVLQWAHAKGCPWGEDACKAAAGGGHLEVLQWAHG
NGCPWAQPPPVAAWQRQEGAAAAETDGSCHGHRARTYFTYARGEGGGDAK
KSTEAGDS*

mRNA from alignment at Contig_212:879..6221+

Legend: polypeptideexonCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_17686 ID=mRNA_17686|Name=jgi.p|Trimin1|354143|organism=Tribonema minus UTEX_B_3156 |type=mRNA|length=5343bp|location=Sequence derived from alignment at Contig_212:879..6221+ (Tribonema minus UTEX_B_3156 )
ATGCAGACGGAGAACCAGCAGGACCGTTGGTCAGGCCCGGCGGCATCGAA
GCCAGCGGCAGCAGCCGTGCTCCGCCTGCGTGCTCTTTGCGACGAGATCC
TTCAATGCGTGAACCCCAGCATCATGCTCCAGGCCACCTGCAAGCTCTTC
AGAGACATCATAGGCGCAGATAGCAATGGCGCCACCTGCACCCTCGTCAG
CGATGGCGTCGCTACCGTCGAGGTCCTCAGGTGGGCCTTGCAGAGCGGTC
TGGACCCCGCAGCAGCGCTCATCGGCTGCGTGCGCGCGGGGAGGCTGGGC
GTGCTCGTCGAGCTGCTTCGCCTTCACTCCGCCGTGGCCCTGCCCAGAGG
CAGAAGGCGCCAGGCCTTGCTTCTAGCAGCAAGCGCTGGCCACCTCTCCT
TCCTCCAGTGCCTGGTGGTCAACGGCTTCCGCTTCCACCCCACAGATTGC
CAGGCAGCCGCCAATCGCGGGCACCTCGAGGTGCTGCAGTGGCTGCGTCA
ACTCGGCTGCGCCTGGAACAAGGGTACATGCTCGGAAGCAGCCGGCGGCG
GGCATCTCGAGACGCTCCAGTGGGCACGCGCAAACGACTGCCCCTGGGAC
GAGTCAACATACTACTCAGCAGCAAGGGGTGGGCACCTTGAGGTGCTCCA
GTGGGCGCGTGCCAACGGCTGCCCCTGGAACAATCGCACTTGCACTTCAG
CAGCGGCGGGCGGGCACTTGGAGGTGCTCCAGTGGGCGCGCGCCAATGGC
TGCCCCTGGGGAGCAAGCACGTGTGCTGGCGCGGCGCGGGGCGGTCACCT
CGAGGTCCTTCAGTGGGCACACGCCAATGACTGCCCCTAGGACGACTGGA
CATGCGCTTTGGCGGCGGAAGGCGGTCACCTAGAGGTGCTCCAGTGGGCA
CACGCCGCTTGGTGCCCCTGGGACGAGTACACGTTTGCCCTAGCAGCGGC
GTGGGGGAACCTCGATATGCTGCAGTGGGCGCACGCCACCGGCTGCCCCT
GGGACGGCTGGGTTTACCATGCAGCAGCAGAATACGGCCACCTCGAGGTG
CTCCAGTGGGCGGCGGCAAACGAGTGCCCCTGGGATAACGGCGAGGAGAC
GTGCGACGCAGCGGCACGCGGCGGCCACCTCGAGGTGCTCCAGTGGGCGC
GCGCCAACGGCTGCCCCTGGGACGAGTAAACATGCTCTTCGGCAGCGGCG
TTCGGGCACCTCGAGGTGCTCCAGTGGGCGCGTGCCAACGGCTGCCCCTG
GGACAAGTCATCATGTTCTTCGGCGGCAGAGTACGGGCACCTCGAGGTGC
TCCAGTGGGCACATGCCAAAGGCTGCCCCTGGGGTGAGGATGCGTGCAAG
GCAGCAGCAGGCGGCGGGCACCTCGAGGTGCTCCAGTGGGCGCACGGCAA
TGGCTGCCCCTGGGGTCAGGGGATCTGCGAAGGGGCGGGCATTTGGAGGT
GCTTCAATGGGTGCATGCCATGGGCTGCCCCTGGGGCTACCTCACATGCG
CTGCGGCAGCATCTAATGGAGATCTCGAGGTACTTCAGTGGTTGCATGCC
AACGGCTGCCCTTGGAACGAGCGCACGTGCTATTCAGCAGCGGTTAGCGG
GCACCTGGAGGTGATCCAGTGGGCGCGCACAAACGGCTGCCCCTGGGATG
CAGCCGCATATCGTGCAGCGCAAACACAGGGGCACCTTCACGTGCTGCAG
TGGCTGACCAGCAACGGTTGCCCAATGCAGTAGTCGTAGTGCAGATAAGG
TTCACCACTGAAGGCGAGTTGAGTTCCCACACACAGCACCAGCTGCCATC
ATGACATGCCGATAGCCCAATGCGCAACTTTGCGAGCCGCTATCACGACC
TCATGGTTAGTCCCTCCTGCCAGTGCAGGCTGAGCGTTGTAGTCCGCAGG
TGCACATCAACATGAAGTAGTGCTCCCCAAAGGTATATCGGTGTACAGTG
GCATGTGTACATACGTTGAACAGGGCATGCATATCTGGTCTTTGCACGCG
GCTAGGCCCTGCGCTCCTGCTGAGCTCGCTCAACAGACTTGTACTCCTGC
AGCATTCTCTTGTACAGTATATACATGCATGTTCCACGAATGTGTGTCGA
GATCTACAGAAGACTGTGTGGGCATATGACGCGGCAACAGCACCCGTCAT
CACAGGGTACATGTGTGTACACCTCGAAAAGGACTGCAGTCATGACATGT
ACCTGCAACGCTGGCCAACCGGCCGCTCTTAGGGGCTTCATAAACGCATG
TATAAATACTGGCAACTGCTGTGCTGTTGCTTGCCTACGCTGCTTGAACC
ATCTCCCTTTTGCATGGCCTTTCTGACATGCGCACAACAAGATTGCAGCT
ACATTGGGTAATGAACTTGAAGTGCAACTTCACCTTGTTCAGCAATGACT
GCCCTCAACTTGAAGGTAAGTTTGAGGATGGTTGTGTGAAGTTTGCATCG
CCATCCTGACCAAGAGCACATGCTGACATGATGTACTGAAGTCTTGTTAC
AGTGAGCAAGCACCAGATTTGCTTGTGTTGGTAACTTAACGTGTAAGACG
CTTCAGTGGCAGCACAGTTTGATGGGATCTCAGGGTACAGCACGGCATAC
GTTGACATTATACCCAAGTCTGCGTTCTGTGTACATTCGAAGTGCAACAC
TGTGCAAACAGCGGTTCAATTCATGTGGCCTGTGACTCACATCGGGTCTC
AGAGGGGTTTCTCTTCGCCCTGCACAAGGCGCAGCCGACTCATCAACCAA
ACTTCAAGATGTGATTGTGCTCAGCAGCAGCCCCACCTCAATGTGTACTG
GATTGTACATCTACACACACCTCACCACCTCGCAACACTACATACCTGAG
GTACCGCAGTCAGTGCGCAAGTGGTGTGTACGCTACCACGGTTATCACAA
ACAACAGTTCGTACTAAAATGTCAATGCAAAGTTATGGTGATGCTCACCA
GCAGCCGTCCCGGCCGTTGTGCTGAGAACGATGCACTAGAGTAGGTAAGG
CCGGACAGCCCCTCAGTGTCGTTCAAGCCTGTCGTCGACGCCAGCGTTTC
AGTTACGTTGCCTGTTGTGTTGCTGTTGAATTCTCGCGTCGGCGCAGGGG
TTTCCGTCACATCGGAGGTCGTCATGGGGGTCCAAACTGCAACTCCGACA
GTGTCAGTGTTGACGTTGTACAATCAGTTGTACCAGCGGTCGGCCACAGC
GGTGAGCGCTGTGGTGGGTGCAGTGAGCATGCAGCACATGCAGGTTAGGA
AGATGAGGACTGGAGGACTGAGGCACGGGACGGTGAATGCGATGCAAATC
GAGAGCATGCGCTGACCGTGTCATTGCTTTGAATTTTCTGCGCTTATTAT
ACGTTGGAGGAGTAATCAATGCACTTGAAAGAAGAATAGAATATCTGGCA
GTCAGTCAATAGAGGTCATATTGCAAGTGCATATTCGCAGCTGCGCAGCC
AGCCCCTCTGCGGGTAGTGGATAATCTTCTCGCAAAGCAGGTGCTGCAGC
ACGCATATTGCACCTACATTGAGCTGATCTCGTCTTGACGCTCTATGTCT
ACCGTTTTGGCAAATTATCGTAATGCAATCCCAGAGTTCAACACAGCATG
TCGTCAATGGCGCGCCAGACAACTGCCGCCGCGCACCCGCACCTGCAACT
GCACAACACTCTTCACCAACACTGCCTATTAGGCTTGGGGCAAGGGTTAC
CGCTAGTTCACTTCGCCGCTACTCACCGGCAGACAGATGCTTGTTCGCGT
TCGCGCTACTTGCTAGCTTCTTTCACAGTTACGAAAACGTTTCAAAAGCT
GAAACGTGAACGACGGGAATTGAACATGTACCTTCTTCACGATCGCCTTG
CATGCTTGCCTTGTGACAAGATCTTCAAATATGGGTTCAGGCAAGTGCGC
AGATGAGCGCAAGCAAGCAAAAACTACAGTACCTAGATCCTTTGCAGGCG
TCAAATCCTATTGTACTTGATATGCACACATGGGCGCCTACATGTCAGGC
ACAGATGTGTGCTTGGACTGGCGCGTCATGTGGCGGCCGCTGCTGTGCAG
AAAGCAACAACGTCATCAAGCATCACACAGAGAAGCTGTTGCATCTGCAT
GCTGTGAAAACTACTTGTGGCGGATCACCGGCGAGTCATCACCAGTTGCG
GATTTCAGCCAGCTCACCTGATGCAGCATGGCAAGCCCATTGGCCAGTGT
ACCCCCCCCCCCCCCCCCCCCCCCCCTGCACTCAATGTTGTTGCGGGGGC
TGCCGGACTCAAGGCGTACGCACATGTAGACAGGCTGCACGTGAAGCACA
CTGTGATTCAGTGCGCTGCAGACGTTAAACGCGCACGCGGCACAAAGCAC
TGTGCTGCCAGCACAGATGCACGTTTCGCACAGAGTGAGGGCCGGGATGC
AACAGCAGCGCTCAGAGCCGGGCGAGACACGGACGCTACCAGGCAACAGC
TCGAGCACCGAAGCAGCAGCAGCAGCATTGCCTGCGCAACCTCCAAACAA
GCAGCAGCGATGGGCAAACAATGGAAAGACAAGAGAAAATCACAAGGTGG
ACTCAACGCACAGATGCCTACATTATGCAAGGTGTGATCTGTGGTTGCTG
TGCTCAGAACTGTCCCCTCCGCCCCTGTGTACACCAGACCACATGACCAC
ATCGCTGCACTGTTATACCACCACAAAATGACCAGGGCACACGCTACCGG
ATCTCCCCGCGCAGAACGCGCGCAGCGCACACAATTGCGTACACACAGCA
GCAACCCCATTTCAACCCCCCTTTCCCCCCCCGCAGCGCAAGCAGCAGCG
CTCACCCACGGCGATCGGCAGAAGACGCGAGCCGACGCGAAGCGGGGCTG
CCCGTCTTACAGGCTACCCCCCAACCTCTCCCCCCACCCCCCTACACGCA
CACATGCACACACACACACGGGACGGGCACCGCCTGAGGAACGTCTCTCC
CGGCCCCCCCCGCCCCGCGCACTATCACTTTGTATACACTCCGGAACCGC
ACGGCCGATGGGGCCGCGCTCCTTCCCCCCCCCCCCCCCCAGCCCAGCCC
CCCCCCGTTGCCGCGTGGCAGCGGCAGGAGGGGGCGGCAGCGGCGGAAAC
GGATGGGAGCTGCCACGGACACAGGGCACGCACCTACTTCACCTACGCGA
GGTACATGGAAAACACACACGGGCGCGGGCCGCGGCGACAGAACCCGCGC
CCCGCCCCCCGCCCCCCCAGGGGGGAGGGGGGGGGGGACGCTAAGAAATC
TACAGAGGCTGGCGACAGCTAGGAGGAAGGGTACCACAGGACCCAGGATT
GGGGTACCCGCACAATCCCCCTCCCCCCCCCCCCCGCGCGCCC

Coding sequence (CDS) from alignment at Contig_212:879..6221+

>mRNA_17686 ID=mRNA_17686|Name=jgi.p|Trimin1|354143|organism=Tribonema minus UTEX_B_3156 |type=CDS|length=1377bp|location=Sequence derived from alignment at Contig_212:879..6221+ (Tribonema minus UTEX_B_3156 )
ATGCAGACGGAGAACCAGCAGGACCGTTGGTCAGGCCCGGCGGCATCGAA
GCCAGCGGCAGCAGCCGTGCTCCGCCTGCGTGCTCTTTGCGACGAGATCC
TTCAATGCGTGAACCCCAGCATCATGCTCCAGGCCACCTGCAAGCTCTTC
AGAGACATCATAGGCGCAGATAGCAATGGCGCCACCTGCACCCTCGTCAG
CGATGGCGTCGCTACCGTCGAGGTCCTCAGGTGGGCCTTGCAGAGCGGTC
TGGACCCCGCAGCAGCGCTCATCGGCTGCGTGCGCGCGGGGAGGCTGGGC
GTGCTCGTCGAGCTGCTTCGCCTTCACTCCGCCGTGGCCCTGCCCAGAGG
CAGAAGGCGCCAGGCCTTGCTTCTAGCAGCAAGCGCTGGCCACCTCTCCT
TCCTCCAGTGCCTGGTGGTCAACGGCTTCCGCTTCCACCCCACAGATTGC
CAGGCAGCCGCCAATCGCGGGCACCTCGAGGTGCTGCAGTGGCTGCGTCA
ACTCGGCTGCGCCTGGAACAAGGGTACATGCTCGGAAGCAGCCGGCGGCG
GGCATCTCGAGACGCTCCAGTGGGCACGCGCAAACGACTGCCCCTGGGAC
GAGTCAACATACTACTCAGCAGCAAGGGGTGGGCACCTTGAGGTGCTCCA
GTGGGCGCGTGCCAACGGCTGCCCCTGGAACAATCGCACTTGCACTTCAG
CAGCGGCGGGCGGGCACTTGGAGGACGACTGGACATGCGCTTTGGCGGCG
GAAGGCGGTCACCTAGAGGTGCTCCAGTGGGCACACGCCGCTTGGTGCCC
CTGGGACGAGTACACGTTTGCCCTAGCAGCGGCGTGGGGGAACCTCGATA
TGCTGCAGTGGGCGCACGCCACCGGCTGCCCCTGGGACGGCTGGGTTTAC
CATGCAGCAGCAGAATACGGCCACCTCGAGGTGCTCCAGTGGGCGGCGGC
AAACGAGTGCCCCTGGGATAACGGCGAGGAGACGTGCGACGCAGCGGCAC
GCGGCGGCCACCTCGAGGTGCTCCAGTGGGCGCGTGCCAACGGCTGCCCC
TGGGACAAGTCATCATGTTCTTCGGCGGCAGAGTACGGGCACCTCGAGGT
GCTCCAGTGGGCACATGCCAAAGGCTGCCCCTGGGGTGAGGATGCGTGCA
AGGCAGCAGCAGGCGGCGGGCACCTCGAGGTGCTCCAGTGGGCGCACGGC
AATGGCTGCCCCTGGGCCCAGCCCCCCCCCGTTGCCGCGTGGCAGCGGCA
GGAGGGGGCGGCAGCGGCGGAAACGGATGGGAGCTGCCACGGACACAGGG
CACGCACCTACTTCACCTACGCGAGGGGGGAGGGGGGGGGGGACGCTAAG
AAATCTACAGAGGCTGGCGACAGCTAG