Trimin1|353305|estExt_Genemark1.C_Ctg_1560007 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	jgi.p\|Trimin1\|353305
Unique Name	Trimin1\|353305\|estExt_Genemark1.C_Ctg_1560007
Type	polypeptide
Organism	Tribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length	759

Homology

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BLAST of jgi.p|Trimin1|353305 vs. uniprot
Match: A0A835Z7Q8_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7Q8_9STRA)

HSP 1 Score: 866 bits (2237), Expect = 7.680e-307
Identity = 758/758 (100.00%), Postives = 758/758 (100.00%), Query Frame = 0

Query:    1 MPDMMVGQRAFFHDGYFWHKDKPKDVRDALALAQRGYQVVRTRDRLPPVEGALNIYVDASKGFAEICRALAAALGKQRNEYAYRSYTNVAMPGFLMWLSEAANDNPPSWITREIMQQLQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPLFASVFPSGVPSGQQEGDILETLRCALWAKDKGEPEGPAAAGQTAVLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLVPSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHANGVARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDSSSCSSGHSAARNRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHXXXXSIARGGGMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAFLGVXXXXXXXXXXXXXXXXXXXDGAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGGAGALAANLGSEFGVDGIGGTFGVXXXXXXXXXXXXXXXXXXXXXXXXXXIPSALAMLAVAA 758
            MPDMMVGQRAFFHDGYFWHKDKPKDVRDALALAQRGYQVVRTRDRLPPVEGALNIYVDASKGFAEICRALAAALGKQRNEYAYRSYTNVAMPGFLMWLSEAANDNPPSWITREIMQQLQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPLFASVFPSGVPSGQQEGDILETLRCALWAKDKGEPEGPAAAGQTAVLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLVPSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHANGVARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDSSSCSSGHSAARNRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHXXXXSIARGGGMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAFLGVXXXXXXXXXXXXXXXXXXXDGAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGGAGALAANLGSEFGVDGIGGTFGVXXXXXXXXXXXXXXXXXXXXXXXXXXIPSALAMLAVAA
Sbjct:    1 MPDMMVGQRAFFHDGYFWHKDKPKDVRDALALAQRGYQVVRTRDRLPPVEGALNIYVDASKGFAEICRALAAALGKQRNEYAYRSYTNVAMPGFLMWLSEAANDNPPSWITREIMQQLQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPLFASVFPSGVPSGQQEGDILETLRCALWAKDKGEPEGPAAAGQTAVLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLVPSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHANGVARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDSSSCSSGHSAARNRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHXXXXSIARGGGMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAFLGVXXXXXXXXXXXXXXXXXXXDGAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGGAGALAANLGSEFGVDGIGGTFGVXXXXXXXXXXXXXXXXXXXXXXXXXXIPSALAMLAVAA 758

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BLAST of jgi.p|Trimin1|353305 vs. uniprot
Match: A0A835ZGC3_9STRA (Uncharacterized protein n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGC3_9STRA)

HSP 1 Score: 665 bits (1717), Expect = 9.100e-225
Identity = 610/679 (89.84%), Postives = 610/679 (89.84%), Query Frame = 0

Query:   76 KQRNEYAYRSYTNVAMPGFLMWLSEAANDNPPSWITREIMQQLQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPLFASVFPSGVPSGQQEGDILETLRCALWAKDKGEPEGPAAAGQTA-----------------------------VLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLVPSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHANGVARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDSSSCSSGHSAARNRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHXXXXSIARGGGMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX----------SPAFLGVXXXXXXXXXXXXXXXXXXXDGAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGGAGALAANLGSEFGVDGIG 715
            KQRNEYAYRSYTNVAMPGFL WLSEAANDNPPSWITREIMQQLQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPLFASVFPSGVPSGQQEGDILETLRCALWAKDKGEPEGPAAAGQTA                             VLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLVPSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHANGVARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDSSSCSSGH AARNRHXXXXXXX         XXXXXX XXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXH XX SIARGGGMRG XXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXXXXXX    XXXXXXXX    XXXXXXXXXXXXXXXXXXXXX          SPAFLGV  XXXXXXXXXXXXXXXXXDGAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGGAGALAANLGSEFGVDGIG
Sbjct:  221 KQRNEYAYRSYTNVAMPGFLKWLSEAANDNPPSWITREIMQQLQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPLFASVFPSGVPSGQQEGDILETLRCALWAKDKGEPEGPAAAGQTAGDGTELCGHYGADGDGSLMAGTGAAAAAAVLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLVPSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHANGVARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDSSSCSSGHGAARNRHXXXXXXXAGVSACGGGXXXXXXLXXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHGXXGSIARGGGMRGRXXXXXXXXXXXXXXXXXXAAIPGXXXXXXXXXXXXXXXXXXXXVHSGXXXXXXXXLATFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSPAFLGVSFXXXXXXXXXXXXXXXXXDGAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGGAGALAANLGSEFGVDGIG 899

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BLAST of jgi.p|Trimin1|353305 vs. uniprot
Match: A0A835YUM3_9STRA (Uncharacterized protein n=4 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUM3_9STRA)

HSP 1 Score: 556 bits (1434), Expect = 4.530e-182
Identity = 584/690 (84.64%), Postives = 590/690 (85.51%), Query Frame = 0

Query:   76 KQRNEYAYRSYTNVAMPGFLMWLSEAANDNPPSWITREIMQQLQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPLFASVFPSGVPSGQQEGDILETLRCAL------------------------WAKD-KGEPE------------------------GPAAAGQTAVLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLVPSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHANGVARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDSSSCSSGHSAARNRHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXXHXXXXSIARGGGMRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--SPAFLGVXXXXXXXXXXXXXXXXXXXDGAGALXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGGAGALAANLGSEFGVDGI 714
            KQRNEYAYRSYTNVAMPGFL WLSEAANDNPPSWITREIM  LQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLP      P       ++  +  + RCA+                        W  D K  P                         G  AA   AVLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQL PSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHAN VARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDSSSCSSGH+AARNR XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXX H XXXSIARGGGMRG XXXXXXXXX     XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      XXXXXXXXXXXXXXXXXXXXXXXXXXX  SPAFLGVXXXXXXXXXXXXXXXXXXXDGAGA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGGAGALAANLGSEFGVDGI
Sbjct:  240 KQRNEYAYRSYTNVAMPGFLKWLSEAANDNPPSWITREIM--LQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWSKWAEACKNIQNVYLPSLQVCSPLVYLRDSRK--VTSSKRCAVHSGPRTRASQRALQQQAKQQLSTVWFGDCKQRPHRMRSCDGTELCGHYGADGDGSLMAGTGAAAAAAVLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGPLSDRPLTEFQLAPSSGPTCAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKASTKEARALRNAVKTHANAVARKQQLDELKLRVELLAGDPVREAEARATLLAFLDGGSSNGHSFDRANKDDSSDGDSSSCSSGHAAARNRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSSALNIGGASALMDSFGGAQRSGDGANAAAPXXXXXXXXXXXXXXXXXXXXXXXXXXSHGXXXSIARGGGMRGGXXXXXXXXXGAAIPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLATFGDXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSPAFLGVXXXXXXXXXXXXXXXXXXXDGAGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVGGAGALAANLGSEFGVDGI 925

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BLAST of jgi.p|Trimin1|353305 vs. uniprot
Match: A0A835YYI8_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YYI8_9STRA)

HSP 1 Score: 153 bits (387), Expect = 2.030e-35
Identity = 72/75 (96.00%), Postives = 74/75 (98.67%), Query Frame = 0

Query:    1 MPDMMVGQRAFFHDGYFWHKDKPKDVRDALALAQRGYQVVRTRDRLPPVEGALNIYVDASKGFAEICRALAAALG 75
            MPD++VGQRAFFHDGYFWHKDKPKDVRDALALAQRGYQVVRTRDRLPPVEGALNIYVDASKGF EICRALAAALG
Sbjct:  516 MPDVVVGQRAFFHDGYFWHKDKPKDVRDALALAQRGYQVVRTRDRLPPVEGALNIYVDASKGFTEICRALAAALG 590

[Close]

BLAST of jgi.p|Trimin1|353305 vs. uniprot
Match: A0A836CB94_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CB94_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.610e-32
Identity = 64/71 (90.14%), Postives = 65/71 (91.55%), Query Frame = 0

Query:    5 MVGQRAFFHDGYFWHKDKPKDVRDALALAQRGYQVVRTRDRLPPVEGALNIYVDASKGFAEICRALAAALG 75
            MV QRAFFHDGYFWHK KPKDVRD LALAQRGYQVVRTRDRLPPVEGALNI VDAS+GF EICR LAAALG
Sbjct:    1 MVEQRAFFHDGYFWHKHKPKDVRDTLALAQRGYQVVRTRDRLPPVEGALNIDVDASRGFTEICRTLAAALG 71

The following BLAST results are available for this feature:

BLAST of jgi.p|Trimin1|353305 vs. uniprot

BLAST of jgi.p|Trimin1|353305 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 5


Match Name	E-value	Identity	Description
A0A835Z7Q8_9STRA	7.680e-307	100.00	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835ZGC3_9STRA	9.100e-225	89.84	Uncharacterized protein n=2 Tax=Tribonema minus Ta...	[more]
A0A835YUM3_9STRA	4.530e-182	84.64	Uncharacterized protein n=4 Tax=Tribonema minus Ta...	[more]
A0A835YYI8_9STRA	2.030e-35	96.00	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A836CB94_9STRA	1.610e-32	90.14	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 423..443
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 413..443
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 316..338

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Contig_156	contig	Contig_156:82794..88874 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Tribonema minus UTEX_B_3156	2021-06-17

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
jgi.p\|Trimin1\|353305	mRNA_14792	Tribonema minus UTEX_B_3156	mRNA	Contig_156 82776..89156 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>Trimin1|353305|estExt_Genemark1.C_Ctg_1560007 ID=Trimin1|353305|estExt_Genemark1.C_Ctg_1560007|Name=jgi.p|Trimin1|353305|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=759bp
MPDMMVGQRAFFHDGYFWHKDKPKDVRDALALAQRGYQVVRTRDRLPPVE
GALNIYVDASKGFAEICRALAAALGKQRNEYAYRSYTNVAMPGFLMWLSE
AANDNPPSWITREIMQQLQTTFSVGKAKKADGSKAQAPKTFLPDKDSLWS
KWAEACKNIQNVYLPLFASVFPSGVPSGQQEGDILETLRCALWAKDKGEP
EGPAAAGQTAVLNTNAATTAGTSAVTPSVAKPMPENWLPRYMLLFILYGP
LSDRPLTEFQLVPSSGPTCAAAAGDTTGGNDSDGASIISGGTNDASSSLS
SAPVIKRCGLTSRRRLKQQQQKQLRSERGLPSLSDEERANKRQVVAALKA
STKEARALRNAVKTHANGVARKQQLDELKLRVELLAGDPVREAEARATLL
AFLDGGSSNGHSFDRANKDDSSDGDSSSCSSGHSAARNRHSSGSGSSAGV
SACGGGSGGSGDLLGSSAGGGDNGGGSSALNIGGASALMDSFGGAQRSGD
GANAAAPADGFGGGGAGNGFGGGGAGNGFGGDGSHGGGGSIARGGGMRGG
GGGGGGAGAAIPGGGFGSSSSRGGGGSIAHGSGVHSGAGAGSGAGLATFG
DGSGGGSSGGGNGALGYGVRSGAGSGGGSGSPAFLGVGFGGDSSGGGNGA
LGNGVRDGAGALGYGVRDGAGALGYGVRDGAGALGYGVRDGAGGVGGAGA
LAANLGSEFGVDGIGGTFGVGGSGGGSSTRSGGTGLAAAAAAAAASIPSA
LAMLAVAA*