Trimin1|353206|estExt_Genemark1.C_Ctg_1490022 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353206
Unique NameTrimin1|353206|estExt_Genemark1.C_Ctg_1490022
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length199
Homology
BLAST of jgi.p|Trimin1|353206 vs. uniprot
Match: A0A836CMW1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMW1_9STRA)

HSP 1 Score: 417 bits (1073), Expect = 5.230e-148
Identity = 198/198 (100.00%), Postives = 198/198 (100.00%), Query Frame = 0
Query:    1 MADLKWDFVASKIDAYGQVQLVIDFIDQEAHLKKIASGAYDSKLRAVGKDAAKDGRQIYVRMLHEMNGDWYNWRAFFGDNTVGDFKNAYKHAVTVLRSMGANLKFQMSYVANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCGATYPKNKFLEDVFGDFYTEVQTFTKRPICIAEMSSTGCICKGKPAWITLGCPLVT 198
            MADLKWDFVASKIDAYGQVQLVIDFIDQEAHLKKIASGAYDSKLRAVGKDAAKDGRQIYVRMLHEMNGDWYNWRAFFGDNTVGDFKNAYKHAVTVLRSMGANLKFQMSYVANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCGATYPKNKFLEDVFGDFYTEVQTFTKRPICIAEMSSTGCICKGKPAWITLGCPLVT
Sbjct:    1 MADLKWDFVASKIDAYGQVQLVIDFIDQEAHLKKIASGAYDSKLRAVGKDAAKDGRQIYVRMLHEMNGDWYNWRAFFGDNTVGDFKNAYKHAVTVLRSMGANLKFQMSYVANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCGATYPKNKFLEDVFGDFYTEVQTFTKRPICIAEMSSTGCICKGKPAWITLGCPLVT 198          
BLAST of jgi.p|Trimin1|353206 vs. uniprot
Match: A0A835ZA06_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZA06_9STRA)

HSP 1 Score: 366 bits (939), Expect = 3.040e-126
Identity = 175/191 (91.62%), Postives = 182/191 (95.29%), Query Frame = 0
Query:    1 MADLKWDFVASKIDAYGQVQLVIDFIDQEAHLKKIASGAYDSKLRAVGKDAAKDGRQIYVRMLHEMNGDWYNWRAFFGDNTVGDFKNAYKHAVTVLRSMGANLKFQMSYVANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCGATYPKNKFLEDVFGDFYTEVQTFTKRPICIAEMSSTGCICKGKPAWIT 191
            + DLKW +VASKIDAYG+VQLVI+FIDQ A+LKKIASGAYDSKLRA GKDAAKDGRQIYVRMLHEMNGDWYNW AFFGDNTVGDFKNAYKHAVTVLRS GAN+KFQMSY ANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCGATYPKNK LEDVFGDFYTEVQTFTKRPICIAEMSSTG ICKGKPAWI+
Sbjct:    5 VTDLKWSYVASKIDAYGKVQLVIEFIDQGANLKKIASGAYDSKLRAFGKDAAKDGRQIYVRMLHEMNGDWYNWCAFFGDNTVGDFKNAYKHAVTVLRSTGANIKFQMSYAANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCGATYPKNKSLEDVFGDFYTEVQTFTKRPICIAEMSSTG-ICKGKPAWIS 194          
BLAST of jgi.p|Trimin1|353206 vs. uniprot
Match: A0A835ZP96_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZP96_9STRA)

HSP 1 Score: 240 bits (612), Expect = 1.330e-74
Identity = 115/198 (58.08%), Postives = 146/198 (73.74%), Query Frame = 0
Query:    3 DLKWDFVASKIDAYGQVQLVIDFIDQ-EAHLKKIASGAYDSKLRAVGKDAAKDGRQIYVRMLHEMNGDWYNWRAFFGDNTVGDFKNAYKHAVTVLRSMGANLKFQMSYVANNASKKKTPFKDFYVGDEYVDQ---------VCTSAYNQCGATYPKNKFLEDVFGDFYTEVQTFTKRPICIAEMSSTGCICKGKPAWI 190
            DL+W +VA++++    VQLVI+F D    +LKKIASGAYD  L   G+DA KDGR+IYVR LHE NGDWY W  ++  N + DF+NAYK  ++VL+S  ANLKFQMS+ A NA+KKK PFKDF+VG+EYVDQ         +C ++YNQCGATYPKN+ L+ +   FY+ V  FTKRP+CIAE+SSTG ICKGKP W+
Sbjct:  119 DLQWRYVANQLNDKKSVQLVIEFFDSGSGNLKKIASGAYDKYLIKFGRDAKKDGRRIYVRPLHEFNGDWYPWGVYYPGNNIKDFRNAYKRIISVLKSTRANLKFQMSFAAKNATKKKVPFKDFFVGNEYVDQASHRLKFKSLCVTSYNQCGATYPKNRPLKKILKTFYSSVTKFTKRPLCIAEISSTG-ICKGKPYWL 315          
BLAST of jgi.p|Trimin1|353206 vs. uniprot
Match: A0A836CBG2_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBG2_9STRA)

HSP 1 Score: 220 bits (560), Expect = 6.280e-66
Identity = 104/186 (55.91%), Postives = 133/186 (71.51%), Query Frame = 0
Query:    6 WDFVASKIDAYGQVQLVIDFIDQEAHLKKIASGAYDSKLRAVGKDAAKDGRQIYVRMLHEMNGDWYNWRAFFGDNTVGDFKNAYKHAVTVLRSMGANLKFQMSYVANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCGA-TYPKNKFLEDVFGDFYTEVQTFTKRPICIAEMSSTGCICKGKPAWI 190
            WD+VAS +D    V+LV++F+D   +L+ IA+G +DSK+R  GK AA DGR+IY+R LHE+N  WYNW  F   N+V DF+NA+K  V+  RS GAN K+QMS+ A N+ K+ TPF+DFYVGDEYVDQVC SAYN CG  TY +NK L ++   FY ++Q  TKR +CIAEMSST   C GK  WI
Sbjct:  254 WDYVASVLDKGVDVELVMEFMDNYPNLRDIANGKFDSKMRDFGKAAAADGRRIYLRPLHELNSAWYNWGVFRPGNSVSDFRNAFKRIVSTFRSTGANFKYQMSFAAKNSDKETTPFEDFYVGDEYVDQVCVSAYNSCGTGTYRENKSLPEIINTFYWQMQAITKRTMCIAEMSSTN-HCGGKATWI 438          
BLAST of jgi.p|Trimin1|353206 vs. uniprot
Match: A0A835ZDK0_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDK0_9STRA)

HSP 1 Score: 205 bits (521), Expect = 2.520e-60
Identity = 101/190 (53.16%), Postives = 123/190 (64.74%), Query Frame = 0
Query:    1 MADLKWDFVASKIDAYGQVQLVIDFIDQEAHLKKIASGAYDSKLRAVGKDAAKDGRQIYVRMLHEMNGDWYNWRAFFGDNTVGDFKNAYKHAVTVLRSMGANLKFQMSYVANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCGATYPKNKFLEDVFGDFYTEVQTFTKRPICIAEMSSTGCICKGKPAWI 190
            + DL W  V + +D    V  V++F D+ ++L+ IA GAYD  L+  GK A KDGR I VR LHEMNG+WY W  F   N++ DFKNA+K  V+VL+S G N KFQ+SY A NAS  K PF DFY GD YVD VC SAYN CGATY +NK L +    +Y E+     +P CIAEMSSTG  C GK  WI
Sbjct:  220 VTDLDWGKVKAVLDDKKGVDFVMEFGDEGSNLRSIAQGAYDHYLQTFGKAAKKDGRTINVRPLHEMNGEWYPWCVFTPGNSLSDFKNAFKRVVSVLKSTGGNFKFQLSYAAQNASGHKNPFMDFYPGDAYVDAVCVSAYNLCGATYDENKPLAESLLPWYAEMSRSVNKPFCIAEMSSTG-FCNGKDQWI 408          
BLAST of jgi.p|Trimin1|353206 vs. uniprot
Match: A0A835Z777_9STRA (GH26 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z777_9STRA)

HSP 1 Score: 200 bits (508), Expect = 4.290e-56
Identity = 95/191 (49.74%), Postives = 120/191 (62.83%), Query Frame = 0
Query:    3 DLKWDFVASKIDAYGQVQLVIDFIDQEAHLKKIASGAYDSKLRAVGKDAAKDGRQIYVRMLHEMNGDWYNWRAFFGDNTVGDFKNAYKHAVTVLRSMGANLKFQMSYVANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCGA-TYPKNKFLEDVFGDFYTEVQTFT-KRPICIAEMSSTGCICKGKPAWIT 191
            DLKW  V+  +D   QVQLV++F D   +L+ + SG YD  L+  GKDA  DGRQ+ +R LHE+NGDWYNW A    N   DF  A++H VT LRS G N KFQ+SY A N+++   PFKDFY GD YVDQ+C SAYN CG  TY  NK   ++   +Y +V  F   + +CIAEMS+T      K  WIT
Sbjct:  381 DLKWSAVSDILDTKRQVQLVMEFYDSYPNLRDVKSGKYDQYLKDFGKDAKADGRQLTIRPLHELNGDWYNWDALRNGNNAEDFPGAFQHVVTTLRSTGGNFKFQISYAAKNSAESNMPFKDFYPGDSYVDQICVSAYNTCGTGTYKSNKSFSEIINTWYFQVTAFAPSKSLCIAEMSTTDQCGSDKAQWIT 571          
BLAST of jgi.p|Trimin1|353206 vs. uniprot
Match: A0A836CCT0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCT0_9STRA)

HSP 1 Score: 197 bits (500), Expect = 1.070e-54
Identity = 95/189 (50.26%), Postives = 124/189 (65.61%), Query Frame = 0
Query:    3 DLKWDFVASKIDAYGQVQLVIDFIDQEAHLKKIASGAYDSKLRAVGKDAAKDGRQIYVRMLHEMNGDWYNWRAFFGDNTVGDFKNAYKHAVTVLRSMGANLKFQMSYVANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCGATYPKNKFLEDVFGDFYTEVQTFTK-RPICIAEMSSTGCICKGKPAWI 190
            +L W ++   +DA   V LVI+F+D  ++L  +A+G YD  L   G+ AA DGR I +R LHE NGDWY W A    N++ DF  A+KH VT LR+ GAN K+Q SY   NA+   TP  ++YVGD+YVDQVC SAYN CG +YP NK L  ++G FY +V +F   +  CIAEMSSTG  C+GKP W+
Sbjct: 1046 NLNWKWIVGFLDAGRNVDLVIEFVDSYSNLADVAAGKYDRFLGKFGQAAADDGRVINIRPLHEFNGDWYPWGALRQGNSMQDFLLAFKHVVTTLRATGANFKYQQSYAMKNANNDPTPLSEWYVGDDYVDQVCVSAYNLCGVSYPTNKPLASMYGSFYYQVLSFAPTKTQCIAEMSSTG-HCEGKPQWL 1233          
BLAST of jgi.p|Trimin1|353206 vs. uniprot
Match: A0A835YSW1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSW1_9STRA)

HSP 1 Score: 180 bits (456), Expect = 1.300e-50
Identity = 88/189 (46.56%), Postives = 120/189 (63.49%), Query Frame = 0
Query:    4 LKWDFVASKIDAYGQVQLVIDFIDQEAHLKKIASGAYDSKLRAVGKDAAKDGRQIYVRMLHEMNGDWYNWRAFFGDNTVGDFKNAYKHAVTVLRSMGANLKFQMSYVANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCGATYPKNKFLEDVFGDFYTEVQTFT-KRPICIAEMSSTGCICKGKPAWIT 191
            L W +V + +D    VQLVI+FID  ++L  +A+G YD  L+  G  A  DGR IY+R LHE NGDWY W  F   N++  FK AY+H +TVLR+ G N K+Q+SY   +A+   T F DFYVGD+Y+ Q+C SAYN  GA YP ++ L  + G  Y + ++F   +P+C+AEMS+T      KP WIT
Sbjct:  279 LSWSWVKTFLDKGTGVQLVIEFIDNYSNLSDVAAGKYDGYLKKFGAFAKADGRLIYLRPLHEFNGDWYPWGIFREGNSLDAFKAAYRHVITVLRATGGNFKYQLSYNVKSANSNPTKFSDFYVGDDYL-QICVSAYNMAGARYPDSRSLATILGYAYAQFESFAPSKPLCLAEMSTTS-YGGDKPLWIT 465          
BLAST of jgi.p|Trimin1|353206 vs. uniprot
Match: A0A836C8I3_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8I3_9STRA)

HSP 1 Score: 163 bits (413), Expect = 2.560e-44
Identity = 90/211 (42.65%), Postives = 123/211 (58.29%), Query Frame = 0
Query:    3 DLKWDFVASKIDAYGQVQLVIDFIDQE---AHLKKIASGAYDSKLRAVGKDAAKDGRQIYVRMLHEMN----------------------GDWYNWRAFFGDNTVGDFKNAYKHAVTVLRSMGANLKFQMSYVANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCG-ATYPKNKF-LEDVFGDFYTEVQTFTKRPICIAEMSSTGCICKGK 186
            +L WD++AS +D    V+LV++F       A+LK +  G YD+ L+  G+ AAKDGR+I VR+LHE+N                      GDWY W AF   N+      AYKHAV++LRS GAN K+Q+SY A NA    TP K F+ GDEYVD+VC +AYN CG ++ P+    L  +   +Y ++  FT + ICI+E+SST   C GK
Sbjct:  182 NLDWDYIASFLDGNRAVELVMEFNSDTPFTANLKDVIGGKYDTDLKDFGRAAAKDGRRITVRLLHELNVFKYKRQGNXXXXXXXXXXXXXGDWYPWGAFTPGNSPEKLVTAYKHAVSLLRSTGANFKYQLSYNARNAGGNSTPLKAFWPGDEYVDEVCVAAYNTCGTSSNPRMTLSLTAIMNTWYKQITAFTTKKICISEISSTS-HCGGK 391          
BLAST of jgi.p|Trimin1|353206 vs. uniprot
Match: A0A835Z8N1_9STRA (Glycoside hydrolase superfamily n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8N1_9STRA)

HSP 1 Score: 156 bits (395), Expect = 1.470e-42
Identity = 85/195 (43.59%), Postives = 113/195 (57.95%), Query Frame = 0
Query:    1 MADLKWDFVASKIDAYGQVQLVIDFIDQEAHLKKIASGAYDSKLRAVGKDAAKDGRQIYVRMLHEMNGDWYNWRAFFGDNTV-----GDFKNAYKHAVTVLRSMGANLKFQMSYVANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCGATYPKNKFLEDVFGDFYTEVQTFTKRPICIAEMSSTGCICKGKPAWI 190
            + DL +D+VA++++    VQLV++F      LK IA+G  D  L      A  DGRQ Y+R LHE NGDWY W   + D T+      DFK AYKH VT+ R+  A ++FQ  Y  +N    KTPFK+FYVGD+YVD VC S YN  G     +     + GDFY ++   T + +CI+EMS+T      KPAWI
Sbjct:  155 VTDLHFDWVATEMNRGHTVQLVLEFFGTS--LKDIAAGGSDGVLSDFANKAKTDGRQFYIRPLHEFNGDWYPW-GIYVDGTLHTDLLSDFKAAYKHIVTIFRNAKAPVQFQQGYNNSNPRDDKTPFKNFYVGDDYVDMVCFSLYNFAGIPNHSSGTFTKLAGDFYNQMTLATSKDLCISEMSTTS-YGVDKPAWI 345          
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353206 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CMW1_9STRA5.230e-148100.00Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835ZA06_9STRA3.040e-12691.62Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835ZP96_9STRA1.330e-7458.08Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836CBG2_9STRA6.280e-6655.91Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835ZDK0_9STRA2.520e-6053.16Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835Z777_9STRA4.290e-5649.74GH26 domain-containing protein n=1 Tax=Tribonema m... [more]
A0A836CCT0_9STRA1.070e-5450.26Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A835YSW1_9STRA1.300e-5046.56Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A836C8I3_9STRA2.560e-4442.65Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]
A0A835Z8N1_9STRA1.470e-4243.59Glycoside hydrolase superfamily n=1 Tax=Tribonema ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.20.20.80Glycosidasescoord: 3..193
e-value: 1.6E-35
score: 124.9
NoneNo IPR availablePIRSRPIRSR018168-1PIRSR018168-1coord: 46..177
e-value: 9.9E-12
score: 42.7
NoneNo IPR availablePIRSRPIRSR018168-3PIRSR018168-3coord: 46..177
e-value: 9.9E-12
score: 42.7
IPR022790Glycosyl hydrolase family 26 domainPFAMPF02156Glyco_hydro_26coord: 57..154
e-value: 1.1E-10
score: 41.4
IPR022790Glycosyl hydrolase family 26 domainPROSITEPS51764GH26coord: 1..198
score: 21.436613
IPR000805Glycoside hydrolase family 26PANTHERPTHR40079MANNAN ENDO-1,4-BETA-MANNOSIDASE E-RELATEDcoord: 52..177
IPR017853Glycoside hydrolase superfamilySUPERFAMILY51445(Trans)glycosidasescoord: 21..190

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_149contigContig_149:200132..201346 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353206mRNA_16636Tribonema minus UTEX_B_3156 mRNAContig_149 200132..201346 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353206|estExt_Genemark1.C_Ctg_1490022 ID=Trimin1|353206|estExt_Genemark1.C_Ctg_1490022|Name=jgi.p|Trimin1|353206|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=199bp
MADLKWDFVASKIDAYGQVQLVIDFIDQEAHLKKIASGAYDSKLRAVGKD
AAKDGRQIYVRMLHEMNGDWYNWRAFFGDNTVGDFKNAYKHAVTVLRSMG
ANLKFQMSYVANNASKKKTPFKDFYVGDEYVDQVCTSAYNQCGATYPKNK
FLEDVFGDFYTEVQTFTKRPICIAEMSSTGCICKGKPAWITLGCPLVT*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022790GH26_dom
IPR000805Glyco_hydro_26
IPR017853Glycoside_hydrolase_SF