Trimin1|353162|estExt_Genemark1.C_Ctg_1470008 (polypeptide) Tribonema minus UTEX_B_3156

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
Namejgi.p|Trimin1|353162
Unique NameTrimin1|353162|estExt_Genemark1.C_Ctg_1470008
Typepolypeptide
OrganismTribonema minus UTEX_B_3156 (Tribonema minus UTEX_B_3156 )
Sequence length432
Homology
[Close]
BLAST of jgi.p|Trimin1|353162 vs. uniprot
Match: A0A835ZDD7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDD7_9STRA)

HSP 1 Score: 798 bits (2061), Expect = 9.090e-291
Identity = 431/431 (100.00%), Postives = 431/431 (100.00%), Query Frame = 0 
Query:    1 MAWITVLESYGRLGKQSDRIRRERRELQRGAQQVSGAVEEELAELEELPGLAEIEALRLVEEVVAAATFARNVEQGCGVSIGALRMILERQEQXXXXXXXXAANAFITPPRRPQGTVRMHPATAPTQSFWQLLQGGNVQRALHNWQYGSRCFGTDGLRLNHLQLSASQRDTAAPLPATSAAQHGHPPAAQWSVTDSAAPLLLSDALTILNEIFIGMRDLVHGGAQAPGAAGPYALVDLTATPRCLFLDAATAPLKPLLAVGQAQRFATGCALDPRGAEGSSAQYIIQSAVDDVHGVLERFHSAVMAWAHRHFPNTAVPWALPPSVILDFGPTSLRFEQLVRNAEVLKNQAVAMVASATAAKRLAAHNRPGTDDRNVRSRLMAPAADGGGGXXXXXXXXXXXXGITRNDLRARGACINHYAERPCLSDTCPY 431
            MAWITVLESYGRLGKQSDRIRRERRELQRGAQQVSGAVEEELAELEELPGLAEIEALRLVEEVVAAATFARNVEQGCGVSIGALRMILERQEQXXXXXXXXAANAFITPPRRPQGTVRMHPATAPTQSFWQLLQGGNVQRALHNWQYGSRCFGTDGLRLNHLQLSASQRDTAAPLPATSAAQHGHPPAAQWSVTDSAAPLLLSDALTILNEIFIGMRDLVHGGAQAPGAAGPYALVDLTATPRCLFLDAATAPLKPLLAVGQAQRFATGCALDPRGAEGSSAQYIIQSAVDDVHGVLERFHSAVMAWAHRHFPNTAVPWALPPSVILDFGPTSLRFEQLVRNAEVLKNQAVAMVASATAAKRLAAHNRPGTDDRNVRSRLMAPAADGGGGXXXXXXXXXXXXGITRNDLRARGACINHYAERPCLSDTCPY
Sbjct:    1 MAWITVLESYGRLGKQSDRIRRERRELQRGAQQVSGAVEEELAELEELPGLAEIEALRLVEEVVAAATFARNVEQGCGVSIGALRMILERQEQXXXXXXXXAANAFITPPRRPQGTVRMHPATAPTQSFWQLLQGGNVQRALHNWQYGSRCFGTDGLRLNHLQLSASQRDTAAPLPATSAAQHGHPPAAQWSVTDSAAPLLLSDALTILNEIFIGMRDLVHGGAQAPGAAGPYALVDLTATPRCLFLDAATAPLKPLLAVGQAQRFATGCALDPRGAEGSSAQYIIQSAVDDVHGVLERFHSAVMAWAHRHFPNTAVPWALPPSVILDFGPTSLRFEQLVRNAEVLKNQAVAMVASATAAKRLAAHNRPGTDDRNVRSRLMAPAADGGGGXXXXXXXXXXXXGITRNDLRARGACINHYAERPCLSDTCPY 431
The following BLAST results are available for this feature:
BLAST of jgi.p|Trimin1|353162 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A835ZDD7_9STRA9.090e-291100.00Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 168..189
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 365..393

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Contig_147contigContig_147:90326..92889 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Tribonema minus UTEX_B_31562021-06-17
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
jgi.p|Trimin1|353162mRNA_16815Tribonema minus UTEX_B_3156 mRNAContig_147 90326..93070 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>Trimin1|353162|estExt_Genemark1.C_Ctg_1470008 ID=Trimin1|353162|estExt_Genemark1.C_Ctg_1470008|Name=jgi.p|Trimin1|353162|organism=Tribonema minus UTEX_B_3156 |type=polypeptide|length=432bp
MAWITVLESYGRLGKQSDRIRRERRELQRGAQQVSGAVEEELAELEELPG
LAEIEALRLVEEVVAAATFARNVEQGCGVSIGALRMILERQEQQERQPAQ
PAANAFITPPRRPQGTVRMHPATAPTQSFWQLLQGGNVQRALHNWQYGSR
CFGTDGLRLNHLQLSASQRDTAAPLPATSAAQHGHPPAAQWSVTDSAAPL
LLSDALTILNEIFIGMRDLVHGGAQAPGAAGPYALVDLTATPRCLFLDAA
TAPLKPLLAVGQAQRFATGCALDPRGAEGSSAQYIIQSAVDDVHGVLERF
HSAVMAWAHRHFPNTAVPWALPPSVILDFGPTSLRFEQLVRNAEVLKNQA
VAMVASATAAKRLAAHNRPGTDDRNVRSRLMAPAADGGGGDGGGSGWGGS
GYGITRNDLRARGACINHYAERPCLSDTCPY*
back to top